; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010921 (gene) of Snake gourd v1 genome

Gene IDTan0010921
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionupstream activation factor subunit spp27-like
Genome locationLG06:72245227..72248265
RNA-Seq ExpressionTan0010921
SyntenyTan0010921
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593744.1 hypothetical protein SDJN03_13220, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5783.56Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG++KAS    S KKSEAGEKKE NRS GI KSVQVSPALAGFLGM ++SR+EAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQNP +KRQINCDEKLK IFDGRE VGFLEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

KAG6593745.1 hypothetical protein SDJN03_13221, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5683.56Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG+LKAS    S KKSEAGEKKE NRS GI KSVQVSPALAGFLGM ++SR EAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQNP +KRQINCDEKLK IFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

XP_023000110.1 upstream activation factor subunit spp27-like [Cucurbita maxima]3.5e-5784.25Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG+LKAS    S KKSEAGEKKE NRS GIFKSVQVSPALAGFLGM ++SRSEAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQNP +KRQINCDEKLK IFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

XP_023000111.1 upstream activation factor subunit spp27-like [Cucurbita maxima]7.8e-5783.56Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG+LKAS    + KKSEAGEKKE NRS GIFKSVQVSPALAGFLGM ++SRSEAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQNP +KRQINCDEKLK IFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

XP_023514456.1 upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]6.0e-5784.25Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKGKLKAS    S K SEAGEKKEVNRS GIFKSVQVSPALAGFLGM ++SR EAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LNNLQNP +KRQINCDEKLK IFDGRE VG LEIGKLLS HFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

TrEMBL top hitse value%identityAlignment
A0A0A0KCY9 SWIB domain-containing protein4.5e-4267.59Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAST---SGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGLSNGT+ F+ CRTLLDSLKS +QAYSS   +S K  LK ST   SG+KS+   KK  N S G+ K+ +VSP LAGFLG  + +R+EAVKQIW YIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAST---SGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQNPTDKRQI CD KLK IF GREKVG LEI K LS HFVKS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS

A0A1S3CBA0 protein TRI1-like3.9e-4669.66Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLK---ASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGLSNGT+ FR C+TLLDSLK  +QAYSS  A+S K KLK   A+ SG+KS+A  K++ N S GI KS++VSP LAGFLG  + SR++A+KQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLK---ASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQN TDKRQINCD KLK IF GREKVG LEI K LSPHFVKS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS

A0A5D3DMJ2 Protein TRI1-like3.9e-4669.66Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLK---ASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGLSNGT+ FR C+TLLDSLK  +QAYSS  A+S K KLK   A+ SG+KS+A  K++ N S GI KS++VSP LAGFLG  + SR++A+KQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLK---ASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS
        LNNLQN TDKRQINCD KLK IF GREKVG LEI K LSPHFVKS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKS

A0A6J1KEZ2 upstream activation factor subunit spp27-like3.8e-5783.56Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG+LKAS    + KKSEAGEKKE NRS GIFKSVQVSPALAGFLGM ++SRSEAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQNP +KRQINCDEKLK IFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

A0A6J1KHF5 upstream activation factor subunit spp27-like1.7e-5784.25Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK
        MASGL+NGT+LFR CRTLLDSLKS +QAYSSAAA+SPKG+LKAS    S KKSEAGEKKE NRS GIFKSVQVSPALAGFLGM ++SRSEAVKQIWSYIK
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKAS---TSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIK

Query:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        LN+LQNP +KRQINCDEKLK IFDGRE VG LEIGKLLSPHFVKSS
Subjt:  LNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.0e-1143.33Show/hide
Query:  KGKLKASTSGKKSEAGE---KKEVNR---SSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFD
        +GK  A  + K+ E GE   K++ N+   ++ + K +++SP LA FLG+ Q SR + VK++W YIK ++LQ+P DKR I CD+KLK++F+
Subjt:  KGKLKASTSGKKSEAGE---KKEVNR---SSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFD

Q05024 Protein TRI17.5e-1038Show/hide
Query:  KLKASTSGKKSEAGEKKEVNRSSGI-FKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPH
        K K  +  K     +K +   S+ I  + V +S  L  FLG  +  R++ VK IW YIK ++LQNP D+R+I CDEK++ IF   +K+    + KLL+ H
Subjt:  KLKASTSGKKSEAGEKKEVNRSSGI-FKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPH

Q08747 Upstream activation factor subunit UAF309.7e-1035.58Show/hide
Query:  GKLKASTSGKKSEAGEKK-EVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSP
        G+ K  +  K +   +KK  V++S    + V +S +LA  LG  + +R+E V+++W+YIK +NLQNP +K++I CDEKL+ I    +     E+ K+L+ 
Subjt:  GKLKASTSGKKSEAGEKK-EVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSP

Query:  HFVK
        H  +
Subjt:  HFVK

Q6STE5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 35.5e-0543.4Show/hide
Query:  QVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFD
        ++ P LA  LG+   SRS  V+ +W Y+K N LQ+  DK  IN D+  + IFD
Subjt:  QVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFD

Q9P7S3 SWI/SNF and RSC complexes subunit ssr36.5e-0635.29Show/hide
Query:  QVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLS
        ++S A A  LG+ + +R + V  +W YIK + LQ+  +KR INCD+ L+ +F+  +++ F  I +L++
Subjt:  QVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLS

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein2.7e-2354.46Show/hide
Query:  KASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVK
        KA+T    + AGE K      GIFK+  VS  LA F G  + +R  A+K++W Y+KL+NLQNP +K++I+CD+KLKTIFDG++KVG  EI KLLSPHF K
Subjt:  KASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVK

Query:  S
        S
Subjt:  S

AT2G14880.1 SWIB/MDM2 domain superfamily protein3.7e-2044.35Show/hide
Query:  SLKSPSQAYSSAA-AISPKGKL---KASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKL
        S ++PS   SS   A  P  KL   +A TS  +S            GI K   VSP +   + +P+ +R++A+K+IW+YIK ++LQ+P +KR+I CDEKL
Subjt:  SLKSPSQAYSSAA-AISPKGKL---KASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQINCDEKL

Query:  KTIFDGREKVGFLEIGKLLSPHFV
        K IF+GR++VGFLEI KL+ PHF+
Subjt:  KTIFDGREKVGFLEIGKLLSPHFV

AT2G35605.1 SWIB/MDM2 domain superfamily protein5.5e-2446.67Show/hide
Query:  TKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKR
        +++F ACR L+                    K  +ST  K    G        +GI K V VS  LA F+G  + SR+ AVK+IW YIKLNNLQNP +KR
Subjt:  TKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKR

Query:  QINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        +I CDE+LKTIF G++ VGFLEI KLLS HF KS+
Subjt:  QINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

AT3G03590.1 SWIB/MDM2 domain superfamily protein7.4e-2950.74Show/hide
Query:  LFRACRTLLDSLKSPSQAYSSAAAI---SPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDK
        +FR  R+LL      + +  SA +    + K K KA    K       K+  RS+GIFK   VSP LA FLG  +TSR++A+K IW+YIK ++LQNP DK
Subjt:  LFRACRTLLDSLKSPSQAYSSAAAI---SPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDK

Query:  RQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS
        R+I CDE LK IF+G++KVGFLEI KLLSPHFVK++
Subjt:  RQINCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.4e-1940.14Show/hide
Query:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTS--GKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKL
        ++SG+ + T L      L  S+ SPS    S    +    ++A TS     S+     +     GI K   VS A+   +G+P+  R++A+K+IW+YIK 
Subjt:  MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTS--GKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKL

Query:  NNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFV
        ++LQ+P +KR I CDEKLK IF+G+E+VGFLEI KL+ PHF+
Subjt:  NNLQNPTDKRQINCDEKLKTIFDGREKVGFLEIGKLLSPHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGGTCTTAGCAATGGAACCAAGTTATTCAGAGCTTGCAGAACCCTCTTGGATTCACTCAAATCCCCCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCC
CAAGGGAAAGCTAAAAGCTTCAACTTCCGGCAAAAAATCGGAAGCCGGAGAGAAGAAAGAGGTCAATCGTTCGTCGGGGATTTTTAAGTCCGTCCAAGTTTCTCCGGCTC
TCGCTGGCTTCCTCGGCATGCCCCAGACTTCGCGTTCCGAAGCCGTCAAGCAAATATGGTCCTACATCAAGCTGAATAACCTCCAGAACCCAACTGATAAGAGGCAGATC
AATTGTGATGAAAAGCTGAAGACTATATTTGATGGAAGAGAGAAAGTGGGGTTCTTAGAGATTGGAAAATTGCTATCCCCTCATTTTGTGAAGTCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
GTCGAGCAAAAGCGGCAAAACAAAAACCCCTGAACCCACCGTCGTCTTCCTCGTAGCAAAATGGCGTCAGGTCTTAGCAATGGAACCAAGTTATTCAGAGCTTGCAGAAC
CCTCTTGGATTCACTCAAATCCCCCTCTCAAGCTTACTCTTCTGCTGCTGCGATCTCTCCCAAGGGAAAGCTAAAAGCTTCAACTTCCGGCAAAAAATCGGAAGCCGGAG
AGAAGAAAGAGGTCAATCGTTCGTCGGGGATTTTTAAGTCCGTCCAAGTTTCTCCGGCTCTCGCTGGCTTCCTCGGCATGCCCCAGACTTCGCGTTCCGAAGCCGTCAAG
CAAATATGGTCCTACATCAAGCTGAATAACCTCCAGAACCCAACTGATAAGAGGCAGATCAATTGTGATGAAAAGCTGAAGACTATATTTGATGGAAGAGAGAAAGTGGG
GTTCTTAGAGATTGGAAAATTGCTATCCCCTCATTTTGTGAAGTCTAGTTAACCATCAAACTTCCAGTGCCATGCATCGACTTAGTTGTTCTAACAGTTCTCTCTCAACC
TGTCTTCCAAATCCTTGATGATGTTTTGGCTAATCCTATGGCTTCAGTGTACTCTTTGGTTTGCCTCTGATTTAAGAAAAAAGAGGTATTTCTTACTCAGACATTGTTGT
TGATTATGCTTTTAGCTTTTAAATGGTTTGTTACATTCAATGTTAGTCTCCTTGGAAGAACTAGAAGACAAGAAAAACCCACAAGAACTGGCTTGAACTGGGGATATCTG
CTTTGCTGCTACCCTAAACATTTTGAAGATTAGGTGTTCTTTCTGTTTTCTTTTTATGTATGGCCTGTTTTTCTTTTTTTGTTTTTTACAACTGTTTTATAGAGCTGTTT
AAAGAAAACTGTATGGCCATTCACTAGTTCACTTATTATATGTCTTTTCCCCCCTCTTTGCCTCTCCTGTACTTTATTTTCAAAACTGAAAAATGTTCTCTATAAGATTT
TTTTTTAAGGAATGAATTATGTTAAATTAAATGGGGAGAACACTATGAAAGAAAGGAAGAAGAATGAGTGAAAAGTGATTGATAATTTGAC
Protein sequenceShow/hide protein sequence
MASGLSNGTKLFRACRTLLDSLKSPSQAYSSAAAISPKGKLKASTSGKKSEAGEKKEVNRSSGIFKSVQVSPALAGFLGMPQTSRSEAVKQIWSYIKLNNLQNPTDKRQI
NCDEKLKTIFDGREKVGFLEIGKLLSPHFVKSS