; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010922 (gene) of Snake gourd v1 genome

Gene IDTan0010922
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSRP54 domain-containing protein
Genome locationLG08:68852855..68855992
RNA-Seq ExpressionTan0010922
SyntenyTan0010922
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596576.1 Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]9.7e-3382.83Show/hide
Query:  GRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN
        GRDGG T GAGSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ER+Q KKK+ MQTLKTTFIVSGVIAAVAVAA V+VKKLR+N
Subjt:  GRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN

XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]4.5e-3075.73Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPG DGGV+D AGS FPA DVDREL+PG N+HVEVDP+SS+VA S+E KEQ KRKAV E+ERK+ KK + M+TLKTTFIVSGVIAAVAVAA  IVKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        REN
Subjt:  REN

XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]4.6e-3582.52Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPGRDGG T GAGSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ERKQ KKK+ MQTLKTTFIVSGV+AAVAVAA V+VKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]3.6e-3583.5Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPGRDGG T GAGSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ERKQ KKK+ MQTLKTTFIVSGVIAAVAVAA V+VKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        R+N
Subjt:  REN

XP_023539528.1 uncharacterized protein LOC111800168 [Cucurbita pepo subsp. pepo]1.9e-2883.15Show/hide
Query:  GSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN
        GSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ERKQ KKK+ MQTLKTTFIVSGV+AAVAVAA V+VKKLR+N
Subjt:  GSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN

TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein7.2e-2669.9Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M S GRD       G  FPAVDV+REL+PG NKHVEVDP+SSQVA S+EAKE  KRKA +++ ++  KKKEAMQTLKTTFIVSG+IAAVAVAA  IVKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        REN
Subjt:  REN

A0A1S3B6R1 uncharacterized protein LOC1034866211.2e-2570.87Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M S GRD       G  FPAVDV+REL+PG NKHVEVDPISSQVA S+EAKE  KR A +E+ ++  KKKEAMQTLKTTFIVSG+IAAVAVAA  IVKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        REN
Subjt:  REN

A0A6J1CUK2 uncharacterized protein LOC1110143622.2e-3075.73Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPG DGGV+D AGS FPA DVDREL+PG N+HVEVDP+SS+VA S+E KEQ KRKAV E+ERK+ KK + M+TLKTTFIVSGVIAAVAVAA  IVKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        REN
Subjt:  REN

A0A6J1G5S8 uncharacterized protein LOC1114510472.2e-3582.52Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPGRDGG T GAGSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ERKQ KKK+ MQTLKTTFIVSGV+AAVAVAA V+VKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        R+N
Subjt:  REN

A0A6J1KYC8 uncharacterized protein LOC1114986801.7e-3583.5Show/hide
Query:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL
        M SPGRDGG T GAGSRFPAVDVDRELHPG N+HV VDPISSQVAASVE KEQ KRKA  E+ERKQ KKK+ MQTLKTTFIVSGVIAAVAVAA V+VKKL
Subjt:  MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKL

Query:  REN
        R+N
Subjt:  REN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein3.8e-1146.51Show/hide
Query:  FPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN
        FP  D + EL+PGQNK+ EVDP+SS++A+        K + + E       K++  +TLK T IVS VI AVA AA  I KKL+EN
Subjt:  FPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCCCAGGCAGAGATGGGGGAGTTACCGACGGTGCAGGTTCCCGGTTTCCGGCCGTGGACGTGGACAGAGAATTACATCCTGGCCAAAACAAGCACGTTGAAGT
CGATCCCATTTCCTCTCAAGTTGCTGCATCTGTGGAAGCTAAGGAGCAGGTGAAGAGGAAAGCAGTGGACGAAGACGAAAGAAAGCAGACGAAGAAGAAGGAAGCGATGC
AGACATTGAAGACGACGTTCATCGTCTCCGGCGTCATCGCCGCCGTGGCGGTGGCCGCCATCGTCATTGTTAAGAAATTACGAGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGCCCAGGCAGAGATGGGGGAGTTACCGACGGTGCAGGTTCCCGGTTTCCGGCCGTGGACGTGGACAGAGAATTACATCCTGGCCAAAACAAGCACGTTGAAGT
CGATCCCATTTCCTCTCAAGTTGCTGCATCTGTGGAAGCTAAGGAGCAGGTGAAGAGGAAAGCAGTGGACGAAGACGAAAGAAAGCAGACGAAGAAGAAGGAAGCGATGC
AGACATTGAAGACGACGTTCATCGTCTCCGGCGTCATCGCCGCCGTGGCGGTGGCCGCCATCGTCATTGTTAAGAAATTACGAGAAAACTGA
Protein sequenceShow/hide protein sequence
MTSPGRDGGVTDGAGSRFPAVDVDRELHPGQNKHVEVDPISSQVAASVEAKEQVKRKAVDEDERKQTKKKEAMQTLKTTFIVSGVIAAVAVAAIVIVKKLREN