; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010940 (gene) of Snake gourd v1 genome

Gene IDTan0010940
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-binding protein 38
Genome locationLG01:102797391..102801776
RNA-Seq ExpressionTan0010940
SyntenyTan0010940
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591668.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-10073.43Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTTFTKVFVGGLAWETPT+EMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN NPMIDGRRANCNIAA+GRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS
        PRGRGQ GVNPYQGST+QAAPSYSGVP PLNQPPLPPPPPPVVYSPYG   +       +G+    +      +HQ  VYN            PYFYGYS
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS

Query:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        LQSPRG FPSPSQSH+    +PP   Y+YYP P AA         F+Y PPPLI HRF+STDSQTSQQTP EAEA  AVTSE+ TT
Subjt:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

KAG7024550.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-10073.17Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTTFTKVFVGGLAWETPT+EMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN NPMIDGRRANCNIAA+GRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS
        PRGRGQ GVNPYQGST+QAAPSYSGVP PLNQPPLPPPPPPVVYSPYG   +       +G+    +      +HQ  VYN            PYFYGYS
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS

Query:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP-------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        LQSPRG FPSPSQSH+    +PP   Y+YYP P AA          F+Y PPPLI HRF+STDSQTSQQTP EAEA  AVTSE+ TT
Subjt:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP-------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

XP_022152706.1 RNA-binding protein 38 [Momordica charantia]1.0e-10572.88Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAY HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFG+ILEAVIITDKNT+KSKGYGFVTFRD ESARRACAN NP+IDGRRANCNIAALGRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY
        PRGR Q G+NPYQGST+QA PSYSGVP+PLNQPPL   PPPPPPVVYSPYG  ++                     YH  AVYNPQ+QQPQ YHQSPY Y
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY

Query:  GYSLQSPRGTFP-SPSQSHRLPPPSSYLYYPTPPAAPPPF----------NYPPPPLIPHRFSSTDSQTSQQTPTEAEA-----GGAVTSESPTT
        GYS+QSPR TF  +P QSH    P SYLYYP   AAP P           NYPPPPL+ HRFSSTDSQTSQQTPTEAEA      GAVTSESP+T
Subjt:  GYSLQSPRGTFP-SPSQSHRLPPPSSYLYYPTPPAAPPPF----------NYPPPPLIPHRFSSTDSQTSQQTPTEAEA-----GGAVTSESPTT

XP_022936617.1 RNA-binding protein 38-like [Cucurbita moschata]1.4e-10273.78Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTTFTKVFVGGLAWETPT+EMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN NPMIDGRRANCNIAA+GRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS
        PRGRGQ GVNPYQGST+QAAPSYSGVP PLNQPPLPPPPPPVVYSPYG   +       +G+    +      +HQ  VYN            PYFYGYS
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS

Query:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        LQSPRG FPSPSQSH+    +PP   Y+YYP P AA         F+YPPPPLI HRF+STDSQTSQQTP EAEA  AVTSE+ TT
Subjt:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

XP_038897135.1 RNA-binding protein 38 [Benincasa hispida]7.4e-10474.32Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTTFTKVFVGGLAWETPT+ MR YFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN+NP+IDGRRANCNIAALGRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGST--VQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPY
        PRGRGQS VNPYQGST  VQA PSY GVPSPLNQPPL   PPPPPP+VYSPYG   +       +G+            H  AVYNPQ+QQPQIY QSPY
Subjt:  PRGRGQSGVNPYQGST--VQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPY

Query:  FYGYSLQSPRGTFPSPSQSH--RLPPPSSYLYYPTP----PAAPPPF-----NYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        FYGYSLQSPRGTF +PSQSH  RL  P SY+YYP P     AA   F     NY  PPLI HRFSSTDSQTSQQTPTE EAGG  + +SPT+
Subjt:  FYGYSLQSPRGTFPSPSQSH--RLPPPSSYLYYPTP----PAAPPPF-----NYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

TrEMBL top hitse value%identityAlignment
A0A0A0LGV2 RRM domain-containing protein1.0e-9871.23Show/hide
Query:  YPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPR
        YPHYRSQFGDTTFTKVFVGGLAWETPT++M+ YFEQFGDILEAVIITDKNTSKSKGYGFVTFRD ESARRACAN NP+IDGRRANCNIAALGRPRPSPPR
Subjt:  YPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPR

Query:  GRGQSGVNPYQGSTV--QAAPSYSGVPSPLNQPPLPPPP---PPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY
        GRGQS VNPYQGST+  QA PSY GVPSPLNQPP+PPPP   PPVVYSPYG   +       +G+          ++H  AVYNPQ+QQPQ+Y Q+PY+Y
Subjt:  GRGQSGVNPYQGSTV--QAAPSYSGVPSPLNQPPLPPPP---PPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY

Query:  GYSLQSPRGTFPSPSQSH---RLPPPSSYLYYPTPPAAPPP------FNYPP---PPLIPHRFSSTDSQTSQQTPTEAEAGGAVTS-ESPTT
        GYS  S   TFP+PSQSH   RL  P SY+YYP PP  PPP      FNYPP   P +I HRFSSTDSQTSQQTPTEAEAGG  +  +SPT+
Subjt:  GYSLQSPRGTFPSPSQSH---RLPPPSSYLYYPTPPAAPPP------FNYPP---PPLIPHRFSSTDSQTSQQTPTEAEAGGAVTS-ESPTT

A0A6J1AEH8 RNA-binding protein 244.1e-8466.44Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRS FGDTT TKVFVGGLAWETPTEEMRRYFEQFG+ILEAVIITDKNT KSKGYGFVTF D ESARRAC + NP+IDGRRANCNIA+LGRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ--------
        PRGR Q G +PYQG   Q APSYSGV +P+  PP PPPPPPV+Y PYG   +                     YHQ A+YNPQIQQPQ YHQ        
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ--------

Query:  --SPYFYGYSLQSPRGTFPSPSQSHRLPPPSSYLYYPTPPAAPPPFNYPPPP--LIPHRF-SSTDSQTSQQTPTEAEAGGAVTSESPTT
          SPY+YGYSLQ+PRGTF +P Q+ R+P P SYLYYPT         YPPPP  L  H F SSTDSQT QQT TE EAG  +TSESP T
Subjt:  --SPYFYGYSLQSPRGTFPSPSQSHRLPPPSSYLYYPTPPAAPPPFNYPPPP--LIPHRF-SSTDSQTSQQTPTEAEAGGAVTSESPTT

A0A6J1DIJ5 RNA-binding protein 385.0e-10672.88Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAY HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFG+ILEAVIITDKNT+KSKGYGFVTFRD ESARRACAN NP+IDGRRANCNIAALGRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY
        PRGR Q G+NPYQGST+QA PSYSGVP+PLNQPPL   PPPPPPVVYSPYG  ++                     YH  AVYNPQ+QQPQ YHQSPY Y
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPL---PPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFY

Query:  GYSLQSPRGTFP-SPSQSHRLPPPSSYLYYPTPPAAPPPF----------NYPPPPLIPHRFSSTDSQTSQQTPTEAEA-----GGAVTSESPTT
        GYS+QSPR TF  +P QSH    P SYLYYP   AAP P           NYPPPPL+ HRFSSTDSQTSQQTPTEAEA      GAVTSESP+T
Subjt:  GYSLQSPRGTFP-SPSQSHRLPPPSSYLYYPTPPAAPPPF----------NYPPPPLIPHRFSSTDSQTSQQTPTEAEA-----GGAVTSESPTT

A0A6J1F8X9 RNA-binding protein 38-like6.7e-10373.78Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTTFTKVFVGGLAWETPT+EMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN NPMIDGRRANCNIAA+GRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS
        PRGRGQ GVNPYQGST+QAAPSYSGVP PLNQPPLPPPPPPVVYSPYG   +       +G+    +      +HQ  VYN            PYFYGYS
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS

Query:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        LQSPRG FPSPSQSH+    +PP   Y+YYP P AA         F+YPPPPLI HRF+STDSQTSQQTP EAEA  AVTSE+ TT
Subjt:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP------PFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

A0A6J1IJV9 RNA-binding protein 38-like8.5e-9873.33Show/hide
Query:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP
        MAYPHYRSQFGDTT TKVFVGGLAWETPT+EMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACAN NPMIDGRRANCNIAA+GRPRPSP
Subjt:  MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSP

Query:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS
        PRGRGQ GVNPYQGST+QAAPSYSGVP PLNQPPL PPPPPVVYSPYG   +       +G+   +H      +HQ  VYN            PYFYGYS
Subjt:  PRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYS

Query:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP---PFNY--PPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
        +QSPRG FP PSQSH+    +PP   Y+YYP P AA      F+Y  PPPPLI HRF+STDSQTSQQTPTEAEA  AVTSE+ TT
Subjt:  LQSPRGTFPSPSQSHR----LPPPSSYLYYPTPPAAPP---PFNY--PPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 246.0e-2459.34Show/hide
Query:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP
        DTT+TK+FVGGL + T    +R+YFE FGDI EAV+ITD+ T KS+GYGFVT  D  +A RAC + NP+IDGR+AN N+A LG +PR   P
Subjt:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP

Q5ZMA3 RNA-binding protein 244.6e-2459.34Show/hide
Query:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP
        DTT+TK+FVGGL + T    +R+YFE FGDI EAV+ITD+ T KS+GYGFVT  D  +A RAC + NP+IDGR+AN N+A LG +PR   P
Subjt:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP

Q6P8A7 RNA-binding protein 244.6e-2459.34Show/hide
Query:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP
        DTT+TK+FVGGL + T    +R+YFE FGDI EAV+ITD+ T KS+GYGFVT  D  +A RAC + NP+IDGR+AN N+A LG +PR   P
Subjt:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP

Q7T3I7 RNA-binding protein 381.3e-2346.43Show/hide
Query:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGRGQSGVNP
        DTTFTK+FVGGL + T    +R+YFE FGDI EAV+ITD+ T+KS+GYGFVT  D  +A RAC + NP+IDGR+AN N+A LG  +P   +     GV  
Subjt:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGRGQSGVNP

Query:  YQGSTVQ----AAPSYSGVPSPLNQPPLPPPPPPVVYSPY
           + +Q      P Y   P+ +    + P P P + SPY
Subjt:  YQGSTVQ----AAPSYSGVPSPLNQPPLPPPPPPVVYSPY

Q9I8B3 RNA-binding protein 24-B4.6e-2459.34Show/hide
Query:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP
        DTT+TK+FVGGL + T    +R+YFE FGDI EAV+ITD+ T KS+GYGFVT  D  +A RAC + NP+IDGR+AN N+A LG +PR   P
Subjt:  DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALG-RPRPSPP

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-3846.37Show/hide
Query:  HY-RSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRP-----
        HY  S FGDTTFTKVFVGGLAWET +E +RR+F+Q+GDILEAV+ITDKNT +SKGYGFVTFRD E+ARRAC +  P+IDGRRANCN+A+LGR RP     
Subjt:  HY-RSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRP-----

Query:  ----SPPRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVY----SPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIY
            +P R R  S   PY GS VQ+         P +QPP       VVY    +PYG +  + +   F+G    +  + +      AV +P  Q  Q+ 
Subjt:  ----SPPRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVY----SPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIY

Query:  HQSPYFYGYSLQSPRGTFPSPSQSHRL----PPPSSYLYYPTP-PAAP
        H  P  +GY+     G   S   SH L      P S +  P P P+AP
Subjt:  HQSPYFYGYSLQSPRGTFPSPSQSHRL----PPPSSYLYYPTP-PAAP

AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-3846.37Show/hide
Query:  HY-RSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRP-----
        HY  S FGDTTFTKVFVGGLAWET +E +RR+F+Q+GDILEAV+ITDKNT +SKGYGFVTFRD E+ARRAC +  P+IDGRRANCN+A+LGR RP     
Subjt:  HY-RSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRP-----

Query:  ----SPPRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVY----SPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIY
            +P R R  S   PY GS VQ+         P +QPP       VVY    +PYG +  + +   F+G    +  + +      AV +P  Q  Q+ 
Subjt:  ----SPPRGRGQSGVNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVY----SPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIY

Query:  HQSPYFYGYSLQSPRGTFPSPSQSHRL----PPPSSYLYYPTP-PAAP
        H  P  +GY+     G   S   SH L      P S +  P P P+AP
Subjt:  HQSPYFYGYSLQSPRGTFPSPSQSHRL----PPPSSYLYYPTP-PAAP

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-4846.5Show/hide
Query:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR
        +YRS FGDTT TKVFVGGLAWETPT+EMRRYF+QFG+ILEAVIITDK T KSKGYGFVTFRD++SA RA A+ NP+IDGR+ANCNIA+ GRPRPS PRGR
Subjt:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR

Query:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYG--LNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ---------
        GQ G  + YQG       SY+G+ +P+ Q         ++Y  YG   N+ +                    YHQ A+YN Q+QQ Q Y Q         
Subjt:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYG--LNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ---------

Query:  ---------SPYFYGYSLQSPRGTFPSP------------------SQSHRLPPPSSYLYYPTPPAAPPPFNYPPP--PLIPHRFSSTDSQTSQQTPTE-
                 SPY+Y   LQ+P    P P                   Q  RLP  SSYL YP+   AP P N P    PL     SST+S   QQ   E 
Subjt:  ---------SPYFYGYSLQSPRGTFPSP------------------SQSHRLPPPSSYLYYPTPPAAPPPFNYPPP--PLIPHRFSSTDSQTSQQTPTE-

Query:  AEAGGAVTSESPTT
         E       ES TT
Subjt:  AEAGGAVTSESPTT

AT1G78260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-5246.67Show/hide
Query:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR
        +YRS FGDTT+TKVFVGGLAWETPT+EMRRYFEQFG+ILEAVIITDKNT KSKGYGFVTFR+++SA RA A+ NP+IDGR+ANCNIA+ GRPRPSPPRGR
Subjt:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR

Query:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ-----------
        GQ+G  + YQ        +Y+G+ +PL     P   P ++Y  YG           + +   +       YHQ A+YN Q+QQ Q Y Q           
Subjt:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ-----------

Query:  ----------SPYFYGYSLQSPRGTFPSPSQSHRLPPPSSYLYYPTPPAAPPPFNYPP------PPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT
                  SPY+YGYSLQ+PR  +      H LP P +   +     + P F   P      PPL     SST+S+   Q    AE     T+   TT
Subjt:  ----------SPYFYGYSLQSPRGTFPSPSQSHRLPPPSSYLYYPTPPAAPPPFNYPP------PPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT

AT1G78260.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-5348.87Show/hide
Query:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR
        +YRS FGDTT+TKVFVGGLAWETPT+EMRRYFEQFG+ILEAVIITDKNT KSKGYGFVTFR+++SA RA A+ NP+IDGR+ANCNIA+ GRPRPSPPRGR
Subjt:  HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGR

Query:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ-----------
        GQ+G  + YQ        +Y+G+ +PL     P   P ++Y  YG           + +   +       YHQ A+YN Q+QQ Q Y Q           
Subjt:  GQSG-VNPYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQ-----------

Query:  ----------SPYFYGYSLQSPRGTFPSPSQSHRLPPP-------------SSYLYYPTPPAAPPP
                  SPY+YGYSLQ+PR  +      H LP P              S+L YP+  +  PP
Subjt:  ----------SPYFYGYSLQSPRGTFPSPSQSHRLPPP-------------SSYLYYPTPPAAPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATACCCACATTACCGATCGCAATTTGGAGATACGACTTTCACTAAAGTTTTCGTCGGCGGCCTTGCTTGGGAGACTCCCACTGAGGAAATGAGAAGATATTTTGA
GCAGTTTGGTGACATTCTTGAAGCTGTGATTATCACTGATAAAAACACCTCTAAATCTAAAGGATATGGATTTGTGACGTTTCGAGACGCTGAGTCTGCGAGAAGGGCTT
GTGCAAATTCGAACCCAATGATCGATGGAAGACGAGCGAATTGTAACATTGCGGCATTGGGACGGCCTCGGCCATCGCCCCCACGAGGACGAGGGCAGAGTGGCGTAAAT
CCCTATCAAGGAAGTACAGTACAGGCAGCGCCCTCATACAGTGGAGTGCCGTCGCCGTTAAACCAGCCACCCCTTCCGCCGCCGCCGCCCCCCGTCGTCTACTCACCATA
CGGGTTGAATAATTTTTTTTTGAAAGTGTTCATATTTTTTGGTTTTGCAGATACCCGACATCTGATCTTGATTATAAATTACCACCAAAGCGCGGTGTACAACCCACAAA
TCCAACAGCCACAAATTTATCATCAATCCCCATATTTCTATGGCTATTCACTGCAATCCCCAAGAGGAACATTTCCATCTCCTTCACAGTCTCATCGGCTACCTCCTCCT
TCTTCTTATCTGTACTATCCTACGCCTCCTGCAGCTCCTCCTCCCTTCAACTACCCTCCTCCTCCTCTCATTCCACACCGTTTTTCCTCTACAGATTCACAGACATCTCA
GCAAACTCCCACAGAAGCTGAAGCTGGAGGAGCTGTTACTTCAGAAAGTCCAACCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATACCCACATTACCGATCGCAATTTGGAGATACGACTTTCACTAAAGTTTTCGTCGGCGGCCTTGCTTGGGAGACTCCCACTGAGGAAATGAGAAGATATTTTGA
GCAGTTTGGTGACATTCTTGAAGCTGTGATTATCACTGATAAAAACACCTCTAAATCTAAAGGATATGGATTTGTGACGTTTCGAGACGCTGAGTCTGCGAGAAGGGCTT
GTGCAAATTCGAACCCAATGATCGATGGAAGACGAGCGAATTGTAACATTGCGGCATTGGGACGGCCTCGGCCATCGCCCCCACGAGGACGAGGGCAGAGTGGCGTAAAT
CCCTATCAAGGAAGTACAGTACAGGCAGCGCCCTCATACAGTGGAGTGCCGTCGCCGTTAAACCAGCCACCCCTTCCGCCGCCGCCGCCCCCCGTCGTCTACTCACCATA
CGGGTTGAATAATTTTTTTTTGAAAGTGTTCATATTTTTTGGTTTTGCAGATACCCGACATCTGATCTTGATTATAAATTACCACCAAAGCGCGGTGTACAACCCACAAA
TCCAACAGCCACAAATTTATCATCAATCCCCATATTTCTATGGCTATTCACTGCAATCCCCAAGAGGAACATTTCCATCTCCTTCACAGTCTCATCGGCTACCTCCTCCT
TCTTCTTATCTGTACTATCCTACGCCTCCTGCAGCTCCTCCTCCCTTCAACTACCCTCCTCCTCCTCTCATTCCACACCGTTTTTCCTCTACAGATTCACAGACATCTCA
GCAAACTCCCACAGAAGCTGAAGCTGGAGGAGCTGTTACTTCAGAAAGTCCAACCACTTGA
Protein sequenceShow/hide protein sequence
MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTSKSKGYGFVTFRDAESARRACANSNPMIDGRRANCNIAALGRPRPSPPRGRGQSGVN
PYQGSTVQAAPSYSGVPSPLNQPPLPPPPPPVVYSPYGLNNFFLKVFIFFGFADTRHLILIINYHQSAVYNPQIQQPQIYHQSPYFYGYSLQSPRGTFPSPSQSHRLPPP
SSYLYYPTPPAAPPPFNYPPPPLIPHRFSSTDSQTSQQTPTEAEAGGAVTSESPTT