; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010986 (gene) of Snake gourd v1 genome

Gene IDTan0010986
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzf-RVT domain-containing protein
Genome locationLG10:15315812..15316391
RNA-Seq ExpressionTan0010986
SyntenyTan0010986
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]8.4e-1432.76Show/hide
Query:  VKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICVWK
        V  LID+  NW++ +I +HF+  D   I++I L K    D+ +W+ DK   ++VKS Y ++   +C    SP    +S   WN++W A+   + KI +W+
Subjt:  VKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICVWK

Query:  IINDAIPTLQNICRRR
         + + +PT  N+ RR+
Subjt:  IINDAIPTLQNICRRR

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]4.9e-1433.05Show/hide
Query:  VKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICVWK
        V  LID +  WR   + +HF+  D+E I+KILL     +DE++W+ DK+  ++VKS Y L+ N+       P   ++S  LW + W      + KI +W+
Subjt:  VKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICVWK

Query:  IINDAIPTLQNICRRRGI
         + + +PT +N+ +RR +
Subjt:  IINDAIPTLQNICRRRGI

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]8.4e-1433.61Show/hide
Query:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC
        D  V  LID++  WRE LI++HF   D E I++I L K   +D++IW+ DK+  ++VKS Y ++   R +    P   +  ++LW  +WK     + KI 
Subjt:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC

Query:  VWKIINDAIPTLQNICRRR
        +W+  +D +PT +N+ +++
Subjt:  VWKIINDAIPTLQNICRRR

XP_024043202.1 uncharacterized protein LOC112099905 [Citrus clementina]6.4e-1431.93Show/hide
Query:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC
        D  V  L+D++ NW+  LI ++ +  D E I+ I L +   +DE+IW+ DKR  + VKS Y ++   + +   SP   ++S   WN++WK     + KI 
Subjt:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC

Query:  VWKIINDAIPTLQNICRRR
        +W+ + + +PT +N+ +R+
Subjt:  VWKIINDAIPTLQNICRRR

XP_041004011.1 uncharacterized protein LOC121249367 [Juglans microcarpa x Juglans regia]8.4e-1433.57Show/hide
Query:  LGIKNLIWVKKEFRDKRVKSLIDDQ-GNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLW
        LG+  +I V+   RD +V  LIDD+ G WR  +I +     + E +  I +S    +D++IW   K     VKS YHL    RC+      D    +D+W
Subjt:  LGIKNLIWVKKEFRDKRVKSLIDDQ-GNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLW

Query:  NMLWKAKTIPQAKICVWKIINDAIPTLQNICRRRGISGKL
          +W        K  +WK +N+ IPT +N+ RRR I   L
Subjt:  NMLWKAKTIPQAKICVWKIINDAIPTLQNICRRRGISGKL

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein2.4e-1436.13Show/hide
Query:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC
        D  V  LID+   W+ESLI +HF   D E I +I L  +   D+I+W+ DK+ N++VKS Y ++   R +  A P   S++   WN++W  +   + KI 
Subjt:  DKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC

Query:  VWKIINDAIPTLQNICRRR
        +WK   + +PT +N+ RR+
Subjt:  VWKIINDAIPTLQNICRRR

A0A2I4DJQ5 uncharacterized protein LOC1089808303.4e-1333.61Show/hide
Query:  KRVKSLIDDQ-GNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC
        ++V  LID Q   W+E L+ E F   ++ DI  I ++    +D+++W       +TVKS YHLS    C +    L     K  W  +WK +  P  K+ 
Subjt:  KRVKSLIDDQ-GNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKIC

Query:  VWKIINDAIPTLQNICRRR
        +W+  N+A+PTL N+ RR+
Subjt:  VWKIINDAIPTLQNICRRR

A0A2N9H705 Uncharacterized protein3.1e-1440.5Show/hide
Query:  VKSLID-DQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYH-LSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICV
        V SLID +   W +SLI   F   D+  I+ I LSK  P D +IW   K   FTV+SAYH L   +RC + +S  D S    LW  +W A+  P+ K+ +
Subjt:  VKSLID-DQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYH-LSCNERCREVASPLDLSASKDLWNMLWKAKTIPQAKICV

Query:  WKIINDAIPTLQNICRRRGIS
        W+  +D +PT  N+  RRG+S
Subjt:  WKIINDAIPTLQNICRRRGIS

A0A7N2KWB9 zf-RVT domain-containing protein6.9e-1432.81Show/hide
Query:  IWVKKEFRDKRVKSLIDDQG-NWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKA
        I+ ++E+ + RV  LIDD+   W+ ++I E F     E+I+ I LS+   +D +IW E+++  F+VKSAY ++     +EV   L   A   LW  +WK 
Subjt:  IWVKKEFRDKRVKSLIDDQG-NWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKA

Query:  KTIPQAKICVWKIINDAIPTLQNICRRR
           P+ ++ +W+   + +PT  N+ R+R
Subjt:  KTIPQAKICVWKIINDAIPTLQNICRRR

B8B9K5 zf-RVT domain-containing protein3.4e-1335.43Show/hide
Query:  IWVKKEFRDKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAK
        I  K+  R + V  LID  G+W    I  HF+  DVE I+ I LS    +D I W+ D+   F+V+SAYHL+      +  S    + S   WN LWK  
Subjt:  IWVKKEFRDKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAK

Query:  TIPQAKICVWKIINDAIPTLQNICRRR
           + KI  W+ I +++ TL+N  +R+
Subjt:  TIPQAKICVWKIINDAIPTLQNICRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGATTAAGAACCTGATTTGGGTTAAGAAGGAGTTCAGAGATAAACGTGTCAAAAGTTTGATTGATGACCAAGGAAACTGGAGGGAGTCTCTCATAATGGAGCA
CTTTATTGCGACAGATGTTGAAGATATCATTAAAATCCTCCTAAGCAAAAACAGTCCTAAAGATGAGATTATCTGGAATGAAGATAAGAGAGAGAATTTCACTGTTAAAA
GTGCATATCATCTTTCCTGCAATGAGAGATGTCGAGAGGTGGCCTCTCCGTTGGATTTAAGTGCAAGTAAAGATCTTTGGAACATGCTTTGGAAGGCGAAAACGATTCCT
CAGGCAAAAATTTGTGTTTGGAAAATCATTAATGACGCTATACCTACTCTTCAAAATATTTGTAGAAGAAGAGGGATTTCTGGAAAGCTAGAGACTGCTGGGGTTGGATG
A
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGATTAAGAACCTGATTTGGGTTAAGAAGGAGTTCAGAGATAAACGTGTCAAAAGTTTGATTGATGACCAAGGAAACTGGAGGGAGTCTCTCATAATGGAGCA
CTTTATTGCGACAGATGTTGAAGATATCATTAAAATCCTCCTAAGCAAAAACAGTCCTAAAGATGAGATTATCTGGAATGAAGATAAGAGAGAGAATTTCACTGTTAAAA
GTGCATATCATCTTTCCTGCAATGAGAGATGTCGAGAGGTGGCCTCTCCGTTGGATTTAAGTGCAAGTAAAGATCTTTGGAACATGCTTTGGAAGGCGAAAACGATTCCT
CAGGCAAAAATTTGTGTTTGGAAAATCATTAATGACGCTATACCTACTCTTCAAAATATTTGTAGAAGAAGAGGGATTTCTGGAAAGCTAGAGACTGCTGGGGTTGGATG
A
Protein sequenceShow/hide protein sequence
MLGIKNLIWVKKEFRDKRVKSLIDDQGNWRESLIMEHFIATDVEDIIKILLSKNSPKDEIIWNEDKRENFTVKSAYHLSCNERCREVASPLDLSASKDLWNMLWKAKTIP
QAKICVWKIINDAIPTLQNICRRRGISGKLETAGVG