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Tan0010997 (gene) of Snake gourd v1 genome

Gene IDTan0010997
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-binding protein S1FA-like
Genome locationLG03:66746197..66748205
RNA-Seq ExpressionTan0010997
SyntenyTan0010997
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]1.9e-3793.26Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPK+KK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

XP_008449267.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]1.6e-3692.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPK+KK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]6.6e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPKRKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

XP_022972581.1 DNA-binding protein S1FA-like [Cucurbita maxima]1.6e-3693.26Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD+DARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQ TLP KRKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]1.7e-3896.63Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFL GNYALYMYAQKTLPPK+KK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

TrEMBL top hitse value%identityAlignment
A0A0A0KEM3 DNA-binding protein S1FA9.3e-3893.26Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPK+KK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

A0A1S3BLN5 DNA-binding protein S1FA-like7.9e-3792.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPK+KK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

A0A5A7TZ88 DNA-binding protein S1FA-like7.9e-3792.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPK+KK VSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

A0A6J1HDT2 DNA-binding protein S1FA-like3.2e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPKRKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

A0A6J1I6D0 DNA-binding protein S1FA-like7.9e-3793.26Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD+DARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQ TLP KRKK VSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

SwissProt top hitse value%identityAlignment
P42551 DNA-binding protein S1FA13.2e-1972.31Show/hide
Query:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP++KK VSKKK+KRE+LKQG+  PGE
Subjt:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

P42552 DNA-binding protein S1FA3.4e-2172.06Show/hide
Query:  IRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        + + +A+G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPPK+KK +SKKKMKRERLKQG++ PGE
Subjt:  IRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

P42553 DNA-binding protein S1FA14.9e-2067.57Show/hide
Query:  NRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        ++  N+I +   +G NPG IVLLVV  LL+ F VGNYALYMYAQKTLPP++KK VSKKK+KRE+LKQG+SAPGE
Subjt:  NRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

Q42337 DNA-binding protein S1FA25.5e-1968.75Show/hide
Query:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP++KK +SKKK+KRE+LKQG+  PGE
Subjt:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

Q7XLX6 DNA-binding protein S1FA28.4e-2070Show/hide
Query:  NVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        NV+ +   +G NPG+IVL+VV   LL F VGNYALY+YAQKTLPP++KK VSKKKMKRE+LKQG+SAPGE
Subjt:  NVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein3.9e-2068.75Show/hide
Query:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP++KK +SKKK+KRE+LKQG+  PGE
Subjt:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

AT3G09735.1 S1FA-like DNA-binding protein3.9e-2070.31Show/hide
Query:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        +++G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP++KK VSKKKMK+E++KQG+  PGE
Subjt:  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

AT3G53370.1 S1FA-like DNA-binding protein2.3e-2072.31Show/hide
Query:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP++KK VSKKK+KRE+LKQG+  PGE
Subjt:  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE

AT3G53370.2 S1FA-like DNA-binding protein7.1e-0666.67Show/hide
Query:  YAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE
        +A K LPP++KK VSKKK+KRE+LKQG+  PGE
Subjt:  YAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGACTTCGATTTCGGTGACAAGGTTCCGCCAGCCGTCAATCGCATGGGGAACGTGATTAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCT
GCTTGTAGTCGGGGGGCTGCTATTGGCTTTTCTTGTTGGGAATTACGCTCTGTACATGTATGCGCAGAAGACCCTCCCTCCAAAAAGGAAGAAACAAGTTTCTAAGAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCAGCTCCCGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
GCGCAACAGGCCTAAATCCACAATCCGCCATTTTCATATCTCCCCCTCCTTTTGTATTTTTCTGGAAGCTTCTGCGGTTCATCTTTGTAGTACAAAACTACAACAGGAGC
CCGTTGCCGTTGCGAAGGCCATCTCTCAGCTTCTGAATTTCAGCCATGGAAGACGACTTCGATTTCGGTGACAAGGTTCCGCCAGCCGTCAATCGCATGGGGAACGTGAT
TAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCTGCTTGTAGTCGGGGGGCTGCTATTGGCTTTTCTTGTTGGGAATTACGCTCTGTACATGTATGCGC
AGAAGACCCTCCCTCCAAAAAGGAAGAAACAAGTTTCTAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCAGCTCCCGGAGAGTAGTAGCGGACTAGTTGT
TGCAGAACTACACTTTTCTCTTATGTGCCGTGTTCCTGTTTCCTGTTTCCTGTTTTTTTTTTCTTGGTTGAACCGACAAGTTCTCCCAATGAATTTCACTGTTTGAAGAC
TTGTTTTGTTTATGTTGTTAACTTAGAATCTGAACATTATAACTAGAAGTTTATCGTCCCTTGTATTCGTAGAGATGGGAAATAAGAATAAGAGCTTAGTTTATATGGTA
TATTTTGATCCAATGTTGTTCCA
Protein sequenceShow/hide protein sequence
MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKRKKQVSKKKMKRERLKQGISAPGE