; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011031 (gene) of Snake gourd v1 genome

Gene IDTan0011031
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprimase homolog protein-like isoform X1
Genome locationLG05:79480876..79486200
RNA-Seq ExpressionTan0011031
SyntenyTan0011031
Gene Ontology termsGO:0032508 - DNA duplex unwinding (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0043139 - 5'-3' DNA helicase activity (molecular function)
InterPro domainsIPR006171 - TOPRIM domain
IPR027032 - Twinkle-like protein
IPR034154 - Archaeal primase DnaG/twinkle, TOPRIM domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573428.1 Primase-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-18484.7Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAP--PSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLS
        MP+ T FNFNFNHR A +  HPLN+ SF SPSL L  TR  CA+S  P  PSPSPPPVKV+MEKMDLIGIVCDE CTPGKYYCL CPKC+GGRLMERSLS
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAP--PSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLS

Query:  LHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLV
        LHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G TAK+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ A RQAAIAFTYRQNGQLV
Subjt:  LHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLV

Query:  GCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDS
        GCKYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAP KVST+AV SI+KDTAYQYLWSCKD LDKV RIILATDS
Subjt:  GCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDS

Query:  DEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        DEPGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEILV LG DALKKAIQDAK YQL ++++IQ E  LES HEP
Subjt:  DEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

XP_022955059.1 primase homolog protein-like isoform X1 [Cucurbita moschata]5.6e-18785.41Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLH
        MP+ T FNFNFNHR A + SHPLN+ SF SPSL L  TR SCA+S  PPSPSPPPVKV+MEKMDLIGIVCDE CTPGKYYCL CPKC+GGRLMERSLSLH
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLH

Query:  VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVGC
        VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G TAK+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ A RQAAIAFTYRQNGQLVGC
Subjt:  VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVGC

Query:  KYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDE
        KYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAP KVST+AV SI+KDTAYQYLWSCKD LDKV RIILATDSDE
Subjt:  KYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDE

Query:  PGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        PGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEILV LG DALKKAI+DAK YQL ++++IQ E  LES HEP
Subjt:  PGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

XP_022994814.1 primase homolog protein isoform X1 [Cucurbita maxima]1.6e-18684.51Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSP----PPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS
        MP+ T FNFNFNHR A + SHPLN+ SF SPSL L  TR SCA+S  PPSPSP    PPVKV+MEKMDLIGIVCDE CTPGKYYCL CPKC+GGRLMERS
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSP----PPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS

Query:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ
        LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G T K+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ AGRQAAIAFTYRQNGQ
Subjt:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ

Query:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT
        LVGCKYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVST+AV SI+KDTAYQYLWSCKD LDKV R+ILAT
Subjt:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT

Query:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        DSDEPGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEIL+ LG DALKKAI+DAK YQL +++ IQ EG LES HEP
Subjt:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

XP_023541322.1 primase homolog protein-like [Cucurbita pepo subsp. pepo]3.1e-18584.51Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAP----PSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS
        MP+ T FNFN NHR A L SHPLN+ SF SPSL L  TR SCA+S  P    PSPSPPPVKV+MEKMDLIGIVCDEHCTPGKYYCL CPKC+GGRLMERS
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAP----PSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS

Query:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ
        LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G T K+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ A RQAAIAFTYRQNGQ
Subjt:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ

Query:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT
        LVGCKYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAP KVST+AV SI+KDTAYQYLWSCKD LDKV RIILAT
Subjt:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT

Query:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        DSDEPGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEIL+ LG DALKKAI+DAK YQL +++QIQ E  LES HEP
Subjt:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

XP_038893950.1 primase homolog protein isoform X1 [Benincasa hispida]2.8e-18686.05Show/hide
Query:  INTTFNF-NFNHRSALLISHPLNDLSFY---SPS--LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS
        +N  FNF NFNHRS    SHP ND SF+   SPS  LR CTTR S AVSH P  PSPPPVKV+MEKMDLIGIVCDEHCTPGKYYCLFCPKC+GGR +ERS
Subjt:  INTTFNF-NFNHRSALLISHPLNDLSFY---SPS--LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS

Query:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ
        LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFN FSRTVK VGR+A+ESLVLEPLGDELISYF+KRMIS ETLERNVVMQIAGRQ AIAFTYRQNGQ
Subjt:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ

Query:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT
        LVGCKYRT+DKRFWQEKGTEKL+YGIDDINDA+ELIIVEGEMDKLSVEEAG LNCISVPGGAP+KVSTD VPS EKDTAYQYLWSCKDYLDKVSRIILAT
Subjt:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT

Query:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHE
        DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEIL+HLGPDALK AIQDAK Y+L +SNQI++E  L+S  E
Subjt:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHE

TrEMBL top hitse value%identityAlignment
A0A0A0LYN4 Toprim domain-containing protein4.6e-17981.65Show/hide
Query:  MPINTTF----NFNF-----NHRSALLISHPLNDLSF-YSPS--LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCR
        MPIN+TF    NFNF     NHRS    SH LN+ S   SPS  LR CTTR S AVSHAP  PSPPPVK +ME+MDL+GIVCDEHC PGKYYCLFCPKC+
Subjt:  MPINTTF----NFNF-----NHRSALLISHPLNDLSF-YSPS--LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCR

Query:  GGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIA
        GGRLMERSLSLHVIPTGDFAMWRCFQ ECGWAG+IFADG+LAFN F +  K+VGR++KESLVLEPL DELISYFS RMIS ETLERNVVMQ+AGRQ  IA
Subjt:  GGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIA

Query:  FTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDK
        FTYRQNGQLVGCKYRT+DKRFWQEKGT K +YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTD VP IEKDTAYQYLWSCKDYLDK
Subjt:  FTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDK

Query:  VSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSH
        VSR+ILATDSD PGQALAEELARRLGK+RCWRV WPYKD FNRFKDANE+LVHLGPDALKKAI+DAK YQLS+SNQIQ+E  L   H
Subjt:  VSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSH

A0A1S3BDI8 primase homolog protein isoform X22.1e-17681.4Show/hide
Query:  MPINTTF----NFNFN----HRSALLISHPLNDLSF-YSPS---LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCR
        MPIN+TF    NFNFN    HRS+   S  LN+ S   SPS   LR CTTR S A+SHAP  P PPPVKV+ EKMDLIGIVCDEHC PGKYYCLFCPKC+
Subjt:  MPINTTF----NFNFN----HRSALLISHPLNDLSF-YSPS---LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCR

Query:  GGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIA
        GGRLMERSLSLHVIPTGDFAMWRCF+ ECGWAGRIFADGRLAFN FS+T K+VGR++KESLVLEPL DELISYFS RMIS ETLERNVVMQ+ GRQ AIA
Subjt:  GGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIA

Query:  FTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDK
        FTYRQNGQLVGCKYRT+DKRFWQEKGT K +YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAP+KVSTD +P IEKD+AYQYLW CKDYLDK
Subjt:  FTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDK

Query:  VSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSH
        VSRIILATDSD PGQALAEELARRLGKHRCWRVDWPYKD FNRFKDANE+LVHLGPDALK AIQDAK YQLS S  IQ+E  L   H
Subjt:  VSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSH

A0A6J1CNI0 primase homolog protein isoform X12.5e-18084.78Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPS-LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSL
        MPIN      FNHR A L  HPLN  SF SP  LR C+TR S A SHAPP PSPPPVKV+MEKMDLIGI CDE+CTPGKYYCLFCPKC+GG L ERSLSL
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPS-LRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSL

Query:  HVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVG
        HV+PTGDFAMWRC+ SECGWAGRIFADGRLAFN   RTVKLVGR+AKESLVLEPLGDELI YFSKRMI  ETLERN VMQIAGRQ  IAFTYRQNGQL+G
Subjt:  HVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVG

Query:  CKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAV-PSIEKDTAYQYLWSCKDYLDKVSRIILATDS
        CKYRT+DKRFWQEKGTEKL+YGIDDINDADE+IIVEGEMDKLSVEEAGFLNCISVPGGAP KVSTD+V PSIEKDTAYQYLWSCKDYLDKVS IILATDS
Subjt:  CKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAV-PSIEKDTAYQYLWSCKDYLDKVSRIILATDS

Query:  DEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQ
        DEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALK+A+++AK Y+ SN+NQIQ
Subjt:  DEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQ

A0A6J1GUU9 primase homolog protein-like isoform X12.7e-18785.41Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLH
        MP+ T FNFNFNHR A + SHPLN+ SF SPSL L  TR SCA+S  PPSPSPPPVKV+MEKMDLIGIVCDE CTPGKYYCL CPKC+GGRLMERSLSLH
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLH

Query:  VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVGC
        VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G TAK+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ A RQAAIAFTYRQNGQLVGC
Subjt:  VIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVGC

Query:  KYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDE
        KYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAP KVST+AV SI+KDTAYQYLWSCKD LDKV RIILATDSDE
Subjt:  KYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDE

Query:  PGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        PGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEILV LG DALKKAI+DAK YQL ++++IQ E  LES HEP
Subjt:  PGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

A0A6J1K3X3 primase homolog protein isoform X17.9e-18784.51Show/hide
Query:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSP----PPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS
        MP+ T FNFNFNHR A + SHPLN+ SF SPSL L  TR SCA+S  PPSPSP    PPVKV+MEKMDLIGIVCDE CTPGKYYCL CPKC+GGRLMERS
Subjt:  MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSP----PPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERS

Query:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ
        LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRT KL G T K+SL+LEPLGDELI+YFSKRMIS ETL+RNVVMQ AGRQAAIAFTYRQNGQ
Subjt:  LSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQ

Query:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT
        LVGCKYRTI+K+FWQ KGTEKL YGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVST+AV SI+KDTAYQYLWSCKD LDKV R+ILAT
Subjt:  LVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILAT

Query:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP
        DSDEPGQALAEELA RLGKHRCWRVDWPYKDDFNRFKDANEIL+ LG DALKKAI+DAK YQL +++ IQ EG LES HEP
Subjt:  DSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP

SwissProt top hitse value%identityAlignment
B5X582 Twinkle homolog protein, chloroplastic/mitochondrial2.5e-8954.67Show/hide
Query:  EHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHET
        E+C PG++  L CP C GG   E+SLSL + P G  A W CF+ +CG  G + ADG LA        K+  +   E + LEPL DE+  YF+ R IS +T
Subjt:  EHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHET

Query:  LERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSI
        LERN VMQ   G +  IAFTY Q G+LV CKYR++ K F+QE+ T +++YG+DDI    E+IIVEGE+DKL++EEAGFLNC+SVP GAP KVS+  +PS 
Subjt:  LERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSI

Query:  EKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQL
        +KDT Y++LW+C DYL K SRI++ATD D PGQA+AEE+ARRLGK RCWRV WP K +   FKDANE+L+  GP  LK+AI DA+ Y +
Subjt:  EKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQL

F4I6E6 Primase homolog protein8.3e-8551.64Show/hide
Query:  IMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDEL
        +M K+   GI   ++C PG   CL CPKC  G   E+SL+L++ P G  A W C + +CG  G +  DG+L   +     K+  +   ES+ LEPL DE+
Subjt:  IMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDEL

Query:  ISYFSKRMISHETLERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGG
          +F+ R IS +TLERN VMQ     +  IAFTY Q G+LV CKYR++ K+F QE+ T K++YG+DDI +  E+IIVEGE DKL++EEAGF NC+SVP G
Subjt:  ISYFSKRMISHETLERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGG

Query:  APNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLY
        AP  VS+  +PS  KDTA++Y+W+C DYL K SRI++ATD D PGQALAEELARRLGK RCW V WP K +   FKDANE+L+  GP  LK+AI +A+ Y
Subjt:  APNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLY

Query:  QLSN
         L +
Subjt:  QLSN

Arabidopsis top hitse value%identityAlignment
AT1G30660.1 nucleic acid binding;nucleic acid binding5.9e-8651.64Show/hide
Query:  IMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDEL
        +M K+   GI   ++C PG   CL CPKC  G   E+SL+L++ P G  A W C + +CG  G +  DG+L   +     K+  +   ES+ LEPL DE+
Subjt:  IMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDEL

Query:  ISYFSKRMISHETLERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGG
          +F+ R IS +TLERN VMQ     +  IAFTY Q G+LV CKYR++ K+F QE+ T K++YG+DDI +  E+IIVEGE DKL++EEAGF NC+SVP G
Subjt:  ISYFSKRMISHETLERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGG

Query:  APNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLY
        AP  VS+  +PS  KDTA++Y+W+C DYL K SRI++ATD D PGQALAEELARRLGK RCW V WP K +   FKDANE+L+  GP  LK+AI +A+ Y
Subjt:  APNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLY

Query:  QLSN
         L +
Subjt:  QLSN

AT1G30680.1 toprim domain-containing protein1.8e-9054.67Show/hide
Query:  EHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHET
        E+C PG++  L CP C GG   E+SLSL + P G  A W CF+ +CG  G + ADG LA        K+  +   E + LEPL DE+  YF+ R IS +T
Subjt:  EHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMWRCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHET

Query:  LERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSI
        LERN VMQ   G +  IAFTY Q G+LV CKYR++ K F+QE+ T +++YG+DDI    E+IIVEGE+DKL++EEAGFLNC+SVP GAP KVS+  +PS 
Subjt:  LERNVVMQ-IAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMYGIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSI

Query:  EKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQL
        +KDT Y++LW+C DYL K SRI++ATD D PGQA+AEE+ARRLGK RCWRV WP K +   FKDANE+L+  GP  LK+AI DA+ Y +
Subjt:  EKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFNRFKDANEILVHLGPDALKKAIQDAKLYQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATAAACACCACTTTCAATTTCAACTTCAATCATCGCTCTGCCCTTCTAATTTCTCACCCGCTTAACGATTTATCCTTCTATTCCCCCTCTCTTCGACTCTGCAC
AACCAGATTCTCATGCGCCGTTTCTCATGCTCCGCCGTCGCCGTCGCCACCACCAGTGAAGGTTATAATGGAGAAGATGGATCTCATCGGAATCGTCTGTGATGAACATT
GTACTCCTGGAAAATACTATTGCCTGTTCTGTCCCAAGTGCAGGGGTGGGCGCTTAATGGAGAGGAGCTTATCTCTACATGTAATTCCAACAGGAGATTTTGCAATGTGG
AGGTGTTTCCAGTCTGAATGTGGTTGGGCAGGCCGGATATTTGCAGATGGAAGATTGGCATTTAATGAATTCAGCAGAACTGTAAAGTTGGTTGGACGAACTGCAAAGGA
GAGTTTGGTTTTGGAGCCTCTTGGTGATGAGCTAATCTCTTACTTCAGCAAGAGAATGATATCCCATGAAACTCTAGAAAGGAATGTTGTTATGCAAATAGCTGGTCGCC
AGGCTGCTATTGCATTTACATATAGACAAAATGGGCAGCTCGTTGGCTGCAAGTACCGAACCATAGACAAGAGATTTTGGCAGGAGAAGGGTACAGAAAAGTTAATGTAT
GGGATTGATGACATTAATGATGCAGATGAACTCATCATTGTCGAAGGTGAAATGGATAAACTTTCAGTAGAAGAAGCTGGCTTCCTCAATTGTATTAGTGTTCCTGGTGG
TGCTCCAAACAAGGTTTCAACTGATGCAGTACCATCAATTGAAAAGGATACTGCATATCAATATTTATGGAGCTGCAAAGACTACTTAGATAAGGTTTCCCGCATTATCT
TGGCTACTGATAGTGATGAACCAGGACAGGCTTTGGCAGAAGAGCTAGCTCGCCGCCTTGGAAAACACAGATGTTGGCGGGTAGATTGGCCATATAAAGATGACTTCAAT
CGTTTTAAAGATGCCAATGAGATTCTAGTGCACTTGGGGCCAGATGCTTTGAAGAAAGCAATTCAAGATGCCAAGTTATATCAACTTTCTAATTCAAATCAAATACAAGA
AGAAGGGTACCTCGAGAGCTCCCACGAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATAAACACCACTTTCAATTTCAACTTCAATCATCGCTCTGCCCTTCTAATTTCTCACCCGCTTAACGATTTATCCTTCTATTCCCCCTCTCTTCGACTCTGCAC
AACCAGATTCTCATGCGCCGTTTCTCATGCTCCGCCGTCGCCGTCGCCACCACCAGTGAAGGTTATAATGGAGAAGATGGATCTCATCGGAATCGTCTGTGATGAACATT
GTACTCCTGGAAAATACTATTGCCTGTTCTGTCCCAAGTGCAGGGGTGGGCGCTTAATGGAGAGGAGCTTATCTCTACATGTAATTCCAACAGGAGATTTTGCAATGTGG
AGGTGTTTCCAGTCTGAATGTGGTTGGGCAGGCCGGATATTTGCAGATGGAAGATTGGCATTTAATGAATTCAGCAGAACTGTAAAGTTGGTTGGACGAACTGCAAAGGA
GAGTTTGGTTTTGGAGCCTCTTGGTGATGAGCTAATCTCTTACTTCAGCAAGAGAATGATATCCCATGAAACTCTAGAAAGGAATGTTGTTATGCAAATAGCTGGTCGCC
AGGCTGCTATTGCATTTACATATAGACAAAATGGGCAGCTCGTTGGCTGCAAGTACCGAACCATAGACAAGAGATTTTGGCAGGAGAAGGGTACAGAAAAGTTAATGTAT
GGGATTGATGACATTAATGATGCAGATGAACTCATCATTGTCGAAGGTGAAATGGATAAACTTTCAGTAGAAGAAGCTGGCTTCCTCAATTGTATTAGTGTTCCTGGTGG
TGCTCCAAACAAGGTTTCAACTGATGCAGTACCATCAATTGAAAAGGATACTGCATATCAATATTTATGGAGCTGCAAAGACTACTTAGATAAGGTTTCCCGCATTATCT
TGGCTACTGATAGTGATGAACCAGGACAGGCTTTGGCAGAAGAGCTAGCTCGCCGCCTTGGAAAACACAGATGTTGGCGGGTAGATTGGCCATATAAAGATGACTTCAAT
CGTTTTAAAGATGCCAATGAGATTCTAGTGCACTTGGGGCCAGATGCTTTGAAGAAAGCAATTCAAGATGCCAAGTTATATCAACTTTCTAATTCAAATCAAATACAAGA
AGAAGGGTACCTCGAGAGCTCCCACGAACCTTGA
Protein sequenceShow/hide protein sequence
MPINTTFNFNFNHRSALLISHPLNDLSFYSPSLRLCTTRFSCAVSHAPPSPSPPPVKVIMEKMDLIGIVCDEHCTPGKYYCLFCPKCRGGRLMERSLSLHVIPTGDFAMW
RCFQSECGWAGRIFADGRLAFNEFSRTVKLVGRTAKESLVLEPLGDELISYFSKRMISHETLERNVVMQIAGRQAAIAFTYRQNGQLVGCKYRTIDKRFWQEKGTEKLMY
GIDDINDADELIIVEGEMDKLSVEEAGFLNCISVPGGAPNKVSTDAVPSIEKDTAYQYLWSCKDYLDKVSRIILATDSDEPGQALAEELARRLGKHRCWRVDWPYKDDFN
RFKDANEILVHLGPDALKKAIQDAKLYQLSNSNQIQEEGYLESSHEP