; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011033 (gene) of Snake gourd v1 genome

Gene IDTan0011033
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:69082236..69082755
RNA-Seq ExpressionTan0011033
SyntenyTan0011033
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595145.1 hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1481.43Show/hide
Query:  MAISGTSKIFAVVVLAIVAVFSAVASAQEA----PAPAPELDRGTAALPAAASMALLCASFFFSLPALLK
        MAISGTS +F VVV AIVAVFSAVASAQE+    PAPAP LDRG AALPAAASMALL ASFF SLPALLK
Subjt:  MAISGTSKIFAVVVLAIVAVFSAVASAQEA----PAPAPELDRGTAALPAAASMALLCASFFFSLPALLK
KGN45142.1 hypothetical protein Csa_015584 [Cucumis sativus]1.3e-0977.05Show/hide
Query:  SKIFAVVVLAIVAVFSAVASAQEAPAPAPELDRGTA-ALPAAASMALLCASFFFSLPALLK
        SKI  VV LA+VA+FSA+ SAQEAPAPAP LDRG A +LP A SMALL ASFFFSLPALLK
Subjt:  SKIFAVVVLAIVAVFSAVASAQEAPAPAPELDRGTA-ALPAAASMALLCASFFFSLPALLK
TrEMBL top hitse value%identityAlignment
A0A0A0K9T6 Uncharacterized protein6.2e-1077.05Show/hide
Query:  SKIFAVVVLAIVAVFSAVASAQEAPAPAPELDRGTA-ALPAAASMALLCASFFFSLPALLK
        SKI  VV LA+VA+FSA+ SAQEAPAPAP LDRG A +LP A SMALL ASFFFSLPALLK
Subjt:  SKIFAVVVLAIVAVFSAVASAQEAPAPAPELDRGTA-ALPAAASMALLCASFFFSLPALLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCCGGCACTTCCAAGATCTTCGCCGTGGTTGTCTTGGCCATCGTCGCGGTCTTCTCGGCCGTCGCTTCCGCACAGGAAGCTCCGGCGCCGGCTCCGGAGCT
CGATCGAGGAACGGCGGCTCTGCCTGCGGCTGCCTCCATGGCTCTGCTCTGTGCTTCCTTCTTCTTCTCTCTTCCTGCGCTTTTGAAGCACTAA
mRNA sequenceShow/hide mRNA sequence
GAAATCACAAATCGTAGAGATTCTTTTTCTCTCGCCCTAATTCCCTCTCTCTTTAATTTCTTTCTCCATCAAACTTTCAGTTTCAATGGCGATTTCCGGCACTTCCAAGA
TCTTCGCCGTGGTTGTCTTGGCCATCGTCGCGGTCTTCTCGGCCGTCGCTTCCGCACAGGAAGCTCCGGCGCCGGCTCCGGAGCTCGATCGAGGAACGGCGGCTCTGCCT
GCGGCTGCCTCCATGGCTCTGCTCTGTGCTTCCTTCTTCTTCTCTCTTCCTGCGCTTTTGAAGCACTAAATTAAATCGATCGCGGATCTTTCATTCACATACATTATTAG
AGATGTATTGGAGTTGATTATACTGTTGATTGTTGATATTATTACGAAATTTATTTGATCGGAAAATAAAAGGAGATCCTCTGGAATCTCTTTAGGTTTATTTGTTCATT
ATTGTTAGTCTGTATTTTTTGTATTTTTTTAGTGTGATTTATTATAAATAATACTCTCTCGGCATGTTTCGATTGTGCTC
Protein sequenceShow/hide protein sequence
MAISGTSKIFAVVVLAIVAVFSAVASAQEAPAPAPELDRGTAALPAAASMALLCASFFFSLPALLKH