; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011034 (gene) of Snake gourd v1 genome

Gene IDTan0011034
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribosome maturation protein SBDS
Genome locationLG01:89733915..89737049
RNA-Seq ExpressionTan0011034
SyntenyTan0011034
Gene Ontology termsGO:0042256 - mature ribosome assembly (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002140 - Ribosome maturation protein Sdo1/SBDS
IPR013087 - Zinc finger C2H2-type
IPR018023 - Ribosome maturation protein SBDS, conserved site
IPR018978 - Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783 - Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR036236 - Zinc finger C2H2 superfamily
IPR036786 - Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR037188 - Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR039100 - Ribosome maturation protein Sdo1/SBDS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592159.1 Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. sororia]1.4e-18491.94Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLL+KLNSW+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR
        SNDQSGNQQRSVICELDPSFYRDCNPLM+ELQG+FEVLSFCLHEEGDTNVDQY DDDFEN+ELPP+ +K  ES+IPQLSEALQKQ ISV+     +EGKR
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR

Query:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CSTCNVVVGD+ QFREHHKSEWHKHN+KRKTK+LPPLTEEECMVE+AM DSESDLK+YSF
Subjt:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

XP_022153710.1 ribosome maturation protein SBDS [Momordica charantia]1.7e-18592.44Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQT ICLKILKEGELQIA K
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLN+WNAS +
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIKESSIPQLSEALQKQTISVEKE----EGKRCST
        SNDQSG+QQRSVICELDPSFYRDCNPLM+ELQGRFEVLSFCLHEEGDTNVDQYDDDF+N ELPP+Q+KES IPQLSEALQ+QTISVE E    EGKRCST
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIKESSIPQLSEALQKQTISVEKE----EGKRCST

Query:  CNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CNV VGD+TQFREHHK EWHKHN+KRKTK+LPPLTEEECMVELAM +SESDLKDYSF
Subjt:  CNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

XP_022936066.1 ribosome maturation protein SBDS [Cucurbita moschata]1.4e-18491.94Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLL+KLNSW+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR
        SNDQSGNQQRSVICELDPSFYRDCNPLM+ELQG+FEVLSFCLHEEGDTNVDQY DDDFEN+ELPP+ +K  ES+IPQLSEALQKQ ISV+     +EGKR
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR

Query:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CSTCNVVVGD+ QFREHHKSEWHKHN+KRKTK+LPPLTEEECMVE+AM DSESDLK+YSF
Subjt:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

XP_022975304.1 ribosome maturation protein SBDS [Cucurbita maxima]1.4e-18491.94Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLL+KLNSW+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR
        SNDQSGNQQRSVICELDPSFYRDCNPLM+ELQG+FEVLSFCLHEEGDTNVDQY DDDFEN+ELPP+ +K  ES+IPQLSEALQKQ ISV+    ++EGKR
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR

Query:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CSTCNVVVGD+ QFREHHKSEWHKHNIKRKTK+LPPLTEEECMVE+A+ DSESDLK+YSF
Subjt:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

XP_038886377.1 ribosome maturation protein SBDS [Benincasa hispida]3.4e-18691.92Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRY VPEQNFPSLL+KLN+W+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC
        SNDQSGNQQRS+ICELDPSFYRDCNPLM+ELQGRFEVLSFCLHEEGDTNVDQYDDD+EN+ELPP+Q+K  ES+IPQL+EALQKQTISV  E    EGKRC
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC

Query:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        STCNVVVGD+TQFREHHKSEWHKHN+KRKTK+LPPLTEEEC VELAM D+ESDLK+YSF
Subjt:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

TrEMBL top hitse value%identityAlignment
A0A1S3CRW0 ribosome maturation protein SBDS1.6e-18189.42Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLL+KLN+W+ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC
        SNDQSGNQQRS+ICELDPSFYRDCNPLM+EL GRFEVLSFCLHEEGDTNVDQY+DD+EN+EL P+Q+K  ESSIPQLSEALQKQTISV  +    EGKRC
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC

Query:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        STCNV VGD+T+FREHHKS+WHKHN+KRKTK+LPPLTEEEC VELAM DSESDLK+YSF
Subjt:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

A0A5A7UXA4 Ribosome maturation protein SBDS1.6e-18189.42Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLL+KLN+W+ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC
        SNDQSGNQQRS+ICELDPSFYRDCNPLM+EL GRFEVLSFCLHEEGDTNVDQY+DD+EN+EL P+Q+K  ESSIPQLSEALQKQTISV  +    EGKRC
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIK--ESSIPQLSEALQKQTISVEKE----EGKRC

Query:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        STCNV VGD+T+FREHHKS+WHKHN+KRKTK+LPPLTEEEC VELAM DSESDLK+YSF
Subjt:  STCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

A0A6J1DHK8 ribosome maturation protein SBDS8.1e-18692.44Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQT ICLKILKEGELQIA K
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLN+WNAS +
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIKESSIPQLSEALQKQTISVEKE----EGKRCST
        SNDQSG+QQRSVICELDPSFYRDCNPLM+ELQGRFEVLSFCLHEEGDTNVDQYDDDF+N ELPP+Q+KES IPQLSEALQ+QTISVE E    EGKRCST
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIKESSIPQLSEALQKQTISVEKE----EGKRCST

Query:  CNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CNV VGD+TQFREHHK EWHKHN+KRKTK+LPPLTEEECMVELAM +SESDLKDYSF
Subjt:  CNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

A0A6J1F6G6 ribosome maturation protein SBDS6.9e-18591.94Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLL+KLNSW+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR
        SNDQSGNQQRSVICELDPSFYRDCNPLM+ELQG+FEVLSFCLHEEGDTNVDQY DDDFEN+ELPP+ +K  ES+IPQLSEALQKQ ISV+     +EGKR
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR

Query:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CSTCNVVVGD+ QFREHHKSEWHKHN+KRKTK+LPPLTEEECMVE+AM DSESDLK+YSF
Subjt:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

A0A6J1IK36 ribosome maturation protein SBDS6.9e-18591.94Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQ EICLKILKEGELQIAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLL+KLNSW+ASII
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR
        SNDQSGNQQRSVICELDPSFYRDCNPLM+ELQG+FEVLSFCLHEEGDTNVDQY DDDFEN+ELPP+ +K  ES+IPQLSEALQKQ ISV+    ++EGKR
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQY-DDDFENIELPPKQIK--ESSIPQLSEALQKQTISVE----KEEGKR

Query:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
        CSTCNVVVGD+ QFREHHKSEWHKHNIKRKTK+LPPLTEEECMVE+A+ DSESDLK+YSF
Subjt:  CSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

SwissProt top hitse value%identityAlignment
P70122 Ribosome maturation protein SBDS2.5e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AF TDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M+DIH++V PN S+K+QALEVI +L+++  I+R+ MR+R+ +P      L EKL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND

Query:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD
         S  QQ  ++C +DP  +R+ + L+   T+ +G  EVLS    EEGD
Subjt:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD

Q3SWZ6 Ribosome maturation protein SBDS7.3e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AF TDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M+DIH++V PN S+K+QALEVI +L+++  I+R+ MR+R+ +P      L EKL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND

Query:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD
            QQ  ++C +DP  +R+ + L+   T+ +G  EVLS    EEGD
Subjt:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD

Q5RAZ2 Ribosome maturation protein SBDS1.4e-6554.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AF TDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M+DIH++V  N S+K+QALEVI +L+++  I+R+ MR+R+ +P      L EKL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND

Query:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD
            QQ  ++C +DP  +R+ + L+   T+ +G  EVL+    EEGD
Subjt:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD

Q5RK30 Ribosome maturation protein SBDS2.5e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AF TDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M+DIH++V PN S+K+QALEVI +L+++  I+R+ MR+R+ +P      L EKL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND

Query:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD
         S  QQ  ++C +DP  +R+ + L+   T+ +G  EVLS    EEGD
Subjt:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD

Q9Y3A5 Ribosome maturation protein SBDS1.4e-6554.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AF TDDQTEIC +IL +GE+Q++ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M+DIH++V  N S+K+QALEVI +L+++  I+R+ MR+R+ +P      L EKL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISND

Query:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD
            QQ  ++C +DP  +R+ + L+   T+ +G  EVL+    EEGD
Subjt:  QSGNQQRSVICELDPSFYRDCNPLM---TELQGRFEVLSFCLHEEGD

Arabidopsis top hitse value%identityAlignment
AT1G43860.1 sequence-specific DNA binding transcription factors5.7e-13162.8Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK
        MS++LVQP+GQKRLTNVAVVRLK+ G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYSNVSKGVLAK+KDL  +F +DD T+IC+ IL++GELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII
        ERE+Q S+QFRDIATIVMQKT NPET+RPYTISM+ERLM +IHFAVDP+ +SKKQAL+VI ELQK FPIKRSPMR+R TVP QNFPSLLEKL  W+ S++
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASII

Query:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYD--DDF---ENIELPPKQIKESS----IPQLSEALQKQTISV-----
        S D+SG Q  S +CE++P  +R+C+  +  +QGR E+L+  +H EGDT++D YD  DD     +  L P + +       + +LS+ LQKQ IS      
Subjt:  SNDQSGNQQRSVICELDPSFYRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYD--DDF---ENIELPPKQIKESS----IPQLSEALQKQTISV-----

Query:  ----EKEEGKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF
            E+++G +CSTCN  VG++ Q+REH KS+WHKHN+KRKT+ LPP++ +ECM E+ MDDS +DLKDYSF
Subjt:  ----EKEEGKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTEEECMVELAMDDSESDLKDYSF

AT2G24500.1 Zinc finger protein 6228.2e-0542.86Show/hide
Query:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE
        G  C++CN    D  + + H+KSEWH++N+KRK   +P +TE
Subjt:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE

AT4G31420.1 Zinc finger protein 6221.4e-0440.48Show/hide
Query:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE
        G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Subjt:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE

AT4G31420.2 Zinc finger protein 6221.4e-0440.48Show/hide
Query:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE
        G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Subjt:  GKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPLTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGATCGCTGGTGCAGCCGATCGGACAGAAGAGGCTGACGAACGTGGCGGTGGTTCGTTTAAAGAGACATGGTCTTCGCTTCGAGATTGCTTGTTACAAGAACAA
GGTCCTTTCTTGGCGCTCTGGCGTGGAGAAAGATCTGGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCAAAAGGAGTTCTTGCGAAAACAAAAGATTTAA
AAGCAGCTTTTGACACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTCCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTT
CGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAACGGCTCATGCGTGATATTCATTTTGCTGTTGA
TCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTCATTCATGAGCTCCAAAAACAGTTCCCAATTAAACGTTCTCCTATGAGAATACGATATACTGTACCTGAACAGA
ACTTTCCATCTCTTCTTGAGAAGTTAAATTCCTGGAATGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTT
TATCGGGACTGTAATCCATTAATGACTGAACTACAAGGGAGATTTGAAGTTCTCTCTTTCTGTTTGCATGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTT
TGAGAACATAGAACTTCCACCCAAGCAAATCAAAGAATCGTCCATTCCTCAGCTAAGTGAAGCTTTACAAAAACAGACAATCTCGGTCGAGAAGGAGGAAGGGAAACGCT
GCAGCACATGCAACGTGGTTGTGGGGGATTCTACTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACATCAAGCGCAAAACCAAGAGTCTCCCTCCCCTG
ACCGAAGAAGAGTGCATGGTAGAATTGGCAATGGACGACTCCGAGTCTGACCTAAAAGACTATTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCGATCGCTGGTGCAGCCGATCGGACAGAAGAGGCTGACGAACGTGGCGGTGGTTCGTTTAAAGAGACATGGTCTTCGCTTCGAGATTGCTTGTTACAAGAACAA
GGTCCTTTCTTGGCGCTCTGGCGTGGAGAAAGATCTGGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCAAAAGGAGTTCTTGCGAAAACAAAAGATTTAA
AAGCAGCTTTTGACACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTCCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTT
CGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAACGGCTCATGCGTGATATTCATTTTGCTGTTGA
TCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTCATTCATGAGCTCCAAAAACAGTTCCCAATTAAACGTTCTCCTATGAGAATACGATATACTGTACCTGAACAGA
ACTTTCCATCTCTTCTTGAGAAGTTAAATTCCTGGAATGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTT
TATCGGGACTGTAATCCATTAATGACTGAACTACAAGGGAGATTTGAAGTTCTCTCTTTCTGTTTGCATGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTT
TGAGAACATAGAACTTCCACCCAAGCAAATCAAAGAATCGTCCATTCCTCAGCTAAGTGAAGCTTTACAAAAACAGACAATCTCGGTCGAGAAGGAGGAAGGGAAACGCT
GCAGCACATGCAACGTGGTTGTGGGGGATTCTACTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACATCAAGCGCAAAACCAAGAGTCTCCCTCCCCTG
ACCGAAGAAGAGTGCATGGTAGAATTGGCAATGGACGACTCCGAGTCTGACCTAAAAGACTATTCATTTTGA
Protein sequenceShow/hide protein sequence
MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKEREAQLSNQF
RDIATIVMQKTFNPETKRPYTISMIERLMRDIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNSWNASIISNDQSGNQQRSVICELDPSF
YRDCNPLMTELQGRFEVLSFCLHEEGDTNVDQYDDDFENIELPPKQIKESSIPQLSEALQKQTISVEKEEGKRCSTCNVVVGDSTQFREHHKSEWHKHNIKRKTKSLPPL
TEEECMVELAMDDSESDLKDYSF