; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011038 (gene) of Snake gourd v1 genome

Gene IDTan0011038
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG11:7188147..7191521
RNA-Seq ExpressionTan0011038
SyntenyTan0011038
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600024.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-13490.44Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LTS  S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQ EN KMVYKRYGCKWKYIHFKGERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

XP_022139301.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia]4.9e-13288.19Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
        M V RG+S  FD LVPKKDCI N NKLTFRAAS KC H Q  Q  TS  S T+ERRIV+KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG

Query:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM
         LNKWIAWETEFPLIA AKALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK+LFSRMISLYDHHD+
Subjt:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM

Query:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        QDK+IEIFADMEELGVKPDEDTVRRVARAF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRVKRDGWDED+
Subjt:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

XP_022942519.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata]8.0e-13590.44Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LT   S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQEEN KMVYKRYGCKWKYIHFKGERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

XP_022996325.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita maxima]1.5e-13389.71Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LTS  S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMI+LYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQEEN K VYKRYGCKWKYIHFK ERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]6.1e-13590.44Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LTS  S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQEEN K+VYKRYGCKWKYIHFKGERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

TrEMBL top hitse value%identityAlignment
A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X14.9e-13086.72Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
        MLV  GSST FDALVPK DCIY  NK  FR ASV CVH Q AQ  TS    T ERR+V+KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG

Query:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM
        ELNKWIAWETEFPLIA AKALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLY+HHD+
Subjt:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM

Query:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        QDKIIEIFADMEELGVKPDEDTVRR+ RAF+KLGQEEN KMVYKRY C+WKYIHFKGERVRV++DGWDED+
Subjt:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

A0A5A7UD21 Pentatricopeptide repeat-containing protein4.9e-13086.72Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
        MLV  GSST FDALVPK DCIY  NK  FR ASV CVH Q AQ  TS    T ERR+V+KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG

Query:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM
        ELNKWIAWETEFPLIA AKALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLY+HHD+
Subjt:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM

Query:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        QDKIIEIFADMEELGVKPDEDTVRR+ RAF+KLGQEEN KMVYKRY C+WKYIHFKGERVRV++DGWDED+
Subjt:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.4e-13288.19Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
        M V RG+S  FD LVPKKDCI N NKLTFRAAS KC H Q  Q  TS  S T+ERRIV+KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG

Query:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM
         LNKWIAWETEFPLIA AKALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK+LFSRMISLYDHHD+
Subjt:  ELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDM

Query:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        QDK+IEIFADMEELGVKPDEDTVRRVARAF+KLGQEEN KMV+KRYGCKWKYIHFKGERVRVKRDGWDED+
Subjt:  QDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic3.9e-13590.44Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LT   S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMISLYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQEEN KMVYKRYGCKWKYIHFKGERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

A0A6J1K6G2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic7.3e-13489.71Show/hide
Query:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
        ML  RGSST FDALVPKK CIYN NKL FRAASVKCVHKQ AQ LTS  S T ERRIV +KVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY
Subjt:  MLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIV-EKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVY

Query:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD
        GELNKWIAWETEFPLIA +KALR+LRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKRLFSRMI+LYDHHD
Subjt:  GELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHD

Query:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE
        +QDKIIEIFADMEELGV+PDEDTVRRVA AFRKLGQEEN K VYKRYGCKWKYIHFK ERVRV+RDGWDED+
Subjt:  MQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDE

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.3e-9270.39Show/hide
Query:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK
        C+  +F++     +      TV  + ++KVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IA AKAL++LRKRSQW 
Subjt:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK

Query:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR
        RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHD+ DK+IE+FADMEEL V PDED+ RRVARAFR
Subjt:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR

Query:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR
        +L QEEN K++ +RY  ++KYI+F GERVRVKR
Subjt:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211903.2e-4646.7Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+ V KAL +L    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRY-GCKWKYIHFKGERVRVK
        AE LWN +   H     ++ F++MIS+Y   DM  K+ E+FADMEELGVKP+   V  V + F KL  ++ ++ + K+Y   +W++ + KG RV+VK
Subjt:  AESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRY-GCKWKYIHFKGERVRVK

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-9370.39Show/hide
Query:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK
        C+  +F++     +      TV  + ++KVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IA AKAL++LRKRSQW 
Subjt:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK

Query:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR
        RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHD+ DK+IE+FADMEEL V PDED+ RRVARAFR
Subjt:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR

Query:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR
        +L QEEN K++ +RY  ++KYI+F GERVRVKR
Subjt:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein4.7e-9376.06Show/hide
Query:  TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGT
        TV  + ++KVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IA AKAL++LRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHD+ DK+IE+FADMEEL V PDED+ RRVARAFR+L QEEN K++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRYGCKWK

Query:  YIHFKGERVRVKR
        YI+F GERVRVKR
Subjt:  YIHFKGERVRVKR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.6e-9370.39Show/hide
Query:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK
        C+  +F++     +      TV  + ++KVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IA AKAL++LRKRSQW 
Subjt:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK

Query:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR
        RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHD+ DK+IE+FADMEEL V PDED+ RRVARAFR
Subjt:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR

Query:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR
        +L QEEN K++ +RY  ++KYI+F GERVRVKR
Subjt:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.6e-9370.39Show/hide
Query:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK
        C+  +F++     +      TV  + ++KVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IA AKAL++LRKRSQW 
Subjt:  CVHKQFAQLLTSSISN----TVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWK

Query:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR
        RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESLWNMILHTHTRSI +RLF+RMI+LY HHD+ DK+IE+FADMEEL V PDED+ RRVARAFR
Subjt:  RVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFR

Query:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR
        +L QEEN K++ +RY  ++KYI+F GERVRVKR
Subjt:  KLGQEENWKMVYKRYGCKWKYIHFKGERVRVKR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein2.3e-4746.7Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+ V KAL +L    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRY-GCKWKYIHFKGERVRVK
        AE LWN +   H     ++ F++MIS+Y   DM  K+ E+FADMEELGVKP+   V  V + F KL  ++ ++ + K+Y   +W++ + KG RV+VK
Subjt:  AESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPDEDTVRRVARAFRKLGQEENWKMVYKRY-GCKWKYIHFKGERVRVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTGGTTTCTCGAGGAAGCTCAACTCGGTTCGATGCCCTCGTGCCGAAGAAAGATTGCATTTACAATGACAACAAATTGACATTTAGAGCTGCCAGTGTCAAGTG
TGTTCACAAGCAATTTGCGCAGCTGCTAACTAGTTCCATTTCCAACACCGTTGAGAGACGTATTGTTGAGAAGGTTGGGAAGGAGACCCACCATTTATGGAAGAAAAGAG
ATTCTGCTGGCTCTGGGCAAAAGGCTTTGAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAG
ACAGAGTTTCCATTGATTGCAGTTGCGAAAGCTTTAAGAGTACTGAGGAAGAGAAGTCAATGGAAGCGCGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGG
AGCCACAATGGGAACATATGACACCCTTCTTCTGGCATTCGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCACACACATACTCGTTCCA
TCTCTAAGCGATTGTTCTCTAGGATGATTTCTTTGTATGACCATCATGACATGCAAGATAAGATTATTGAGATATTTGCAGACATGGAGGAGTTGGGCGTAAAACCAGAT
GAAGACACCGTTAGAAGAGTTGCCCGTGCTTTTCGAAAACTAGGACAAGAAGAAAACTGGAAAATGGTCTATAAAAGATATGGCTGCAAATGGAAATACATACACTTCAA
GGGTGAGAGGGTTAGAGTGAAGAGAGATGGATGGGATGAAGATGAGGGATAA
mRNA sequenceShow/hide mRNA sequence
CTCAACACTAGAAGGGATTTAAGAAAGAAGATCAACAAAATGCAGCATACAATTCTAAAAAGATTCAAAGCCTTTTGCCTAGAGCCAACATAATCTCTGTTCTTCCATAA
GCCTCCTTTCCAACATTGTCAACCAACATGAAAATCAAAATAAATATTCTGGGGTTGGAAGGAAAATCAGAAAACATTCTAATCCAAGAAGTTGGGTCGTTTCTGAGATA
AGGAGTTCACACCCTTGTTCTTCTTCGCCCCCAAAAGAACAATCATCAGCCAAAGCTTCTGCAGAGCCCTTCAATGAATCAACCCCTTTGGCCAGAGTCCAATTTCTTGA
TTATGCTTGATACCCAATACACGAAGCGCTGAAATTTGAAAAATATGATGTTGGTTTCTCGAGGAAGCTCAACTCGGTTCGATGCCCTCGTGCCGAAGAAAGATTGCATT
TACAATGACAACAAATTGACATTTAGAGCTGCCAGTGTCAAGTGTGTTCACAAGCAATTTGCGCAGCTGCTAACTAGTTCCATTTCCAACACCGTTGAGAGACGTATTGT
TGAGAAGGTTGGGAAGGAGACCCACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTTTGAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGA
AAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGATTGCAGTTGCGAAAGCTTTAAGAGTACTGAGGAAGAGAAGTCAATGGAAG
CGCGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTTCTGGCATTCGATATGGACAAGAGGGTGGACGAAGC
CGAATCCTTATGGAACATGATTTTGCACACACATACTCGTTCCATCTCTAAGCGATTGTTCTCTAGGATGATTTCTTTGTATGACCATCATGACATGCAAGATAAGATTA
TTGAGATATTTGCAGACATGGAGGAGTTGGGCGTAAAACCAGATGAAGACACCGTTAGAAGAGTTGCCCGTGCTTTTCGAAAACTAGGACAAGAAGAAAACTGGAAAATG
GTCTATAAAAGATATGGCTGCAAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGAGTGAAGAGAGATGGATGGGATGAAGATGAGGGATAAATCAAAACTGCAAG
AAAAGATTTGTGGTTGAAATTATTGAAGAGCAGAGATGGCAACTTCATCATGGATAAGTTCACAAGGTTTGCGGTATAAACGAAAAGGCGAACGGGTCTGAATCAAGTAG
ATTTTCCTGGGGATGAAGATGAACTTACCCAGATAAGATCTGCACATCTTTTGCTTTTGCCTAGTTATGAAAACAGTAGAAAAGGTATAGTGAAAGTTGAATAAATTTCA
TATCAAACTTTAAATCTTCATCCTGAAGCATCAAGTCACTGCTAGGATTATGAAAAAAGAGAACTGGACTGACTATTGTTAGATAAGATAGATTTGAACAATCCCAACAA
ACAAAATAGATGACATGATATCCAAATTGCATACTTTTTTGTCATAAGGGTATGGTTGGGTAGGCAGAAGATAGATCTTAACATTTTAATAATGTATTGATTATATAATA
TAGATTTTGATGTTTGCTGAATGATTTGAAACTACTATTTTATATGAATGTATAATTACTTATGATTTTAGATGTGTTCCATGAGGTAAAATCCTAAATCCAGATTGAAG
TGGATGCCATTCCTGTCAAGTACAGAGGACAAC
Protein sequenceShow/hide protein sequence
MMLVSRGSSTRFDALVPKKDCIYNDNKLTFRAASVKCVHKQFAQLLTSSISNTVERRIVEKVGKETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWE
TEFPLIAVAKALRVLRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYDHHDMQDKIIEIFADMEELGVKPD
EDTVRRVARAFRKLGQEENWKMVYKRYGCKWKYIHFKGERVRVKRDGWDEDEG