CuGenDBv2

Gene ID	Tan0011092
Organism	Trichosanthes anguina (Snake gourd v1)
Description	photosystem II reaction center protein H
Genome location	LG04:52491867..52492088
RNA-Seq Expression	Tan0011092
Synteny	Tan0011092
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0050821 - protein stabilization (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0042301 - phosphate ion binding (molecular function)
InterPro domains	IPR001056 - Photosystem II reaction centre protein H IPR036863 - Photosystem II reaction centre protein H superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ALO21758.1 PsbH [Cucurbita argyrosperma]

6.0e-29

95.89

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLF IFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

YP_009317415.1 photosystem II protein H [Coccinia grandis]

4.6e-29

95.89

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTV+DSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

YP_009447479.1 photosystem II protein H [Cucurbita maxima]

2.1e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

YP_009456090.1 photosystem II protein H [Momordica charantia]

7.8e-29

95.89

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

YP_009753118.1 photosystem II subunit H [Corallocarpus boehmii]

7.8e-29

95.89

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVG+LLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IGM9 Photosystem II reaction center protein H

1.0e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

A0A346QN61 Photosystem II reaction center protein H

1.0e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

A0A410HFB6 Photosystem II reaction center protein H

1.0e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

A0A6H0ERB6 Photosystem II reaction center protein H

1.0e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

A0A6M3RU29 Photosystem II reaction center protein H

1.0e-29

97.26

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV MGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

SwissProt top hits

e value

%identity

Alignment

Q2PMQ6 Photosystem II reaction center protein H

1.5e-30

91.78

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVED+SRSGPRRT+VGDLLK LNSEYGKVAPGWGTTPLMGV M LFAIFLSIILEIYNSSILLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Q3C1M6 Photosystem II reaction center protein H

1.3e-29

89.04

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE+SSRSGPRRT VGDLLK LNSEYGKVAPGWGTTPLMGV M LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Q49KW9 Photosystem II reaction center protein H

5.6e-30

90.41

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE SSRSGPRRTIVGDLLK LNSEYGKVAPGWGTTPLMGV M LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Q4VZI9 Photosystem II reaction center protein H

3.3e-30

90.41

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTV+DSS+SGPRRT+VGDLLK LNSEYGKVAPGWGTTPLMGV M LFAIFL IILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Q7FNS3 Photosystem II reaction center protein H

1.3e-29

89.04

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE+SSRSGPRRT VGDLLK LNSEYGKVAPGWGTTPLMGV M LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00710.1 photosystem II reaction center protein H

9.9e-30

87.67

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Query:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPR T VG LLK LNSEYGKVAPGWGTTPLMGV M LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Sequences

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CDS sequence

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ATGGCTACACAAACCGTTGAGGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAATCATTGAATTCAGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACGCCTTTGATGGGTGTCGTGATGGGTCTATTTGCGATATTCCTATCTATTATTTTGGAGATTTATAATTCTTCCATTTTACTAGACGGAATTTCAAGCAATT
AG

mRNA sequence

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Protein sequence

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MATQTVEDSSRSGPRRTIVGDLLKSLNSEYGKVAPGWGTTPLMGVVMGLFAIFLSIILEIYNSSILLDGISSN

Tan0011092 (gene) of Snake gourd v1 genome