CuGenDBv2

Gene ID	Tan0011108
Organism	Trichosanthes anguina (Snake gourd v1)
Description	EF-hand calcium-binding domain-containing protein 4A
Genome location	LG10:7463376..7464006
RNA-Seq Expression	Tan0011108
Synteny	Tan0011108
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438723.1 PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]

8.8e-77

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_011650993.1 uncharacterized protein LOC105434839 [Cucumis sativus]

5.7e-76

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ++SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_022936946.1 uncharacterized protein LOC111443378 [Cucurbita moschata]

1.7e-75

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_023522910.1 uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo]

2.2e-75

95.07

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRP+ELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

XP_038875149.1 uncharacterized protein LOC120067683 [Benincasa hispida]

7.5e-76

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRPVELQIRVGSILK+VH+LKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ+ISLEDLREFSEIRIFRDHQRGCVSV KKPRPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8V0 Uncharacterized protein

2.8e-76

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ++SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A1S3AWR3 uncharacterized protein LOC103483746

4.3e-77

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A5A7U2C9 Uncharacterized protein

4.3e-77

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTR+WNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A6J1F8W2 uncharacterized protein LOC111443378

8.1e-76

95.77

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDHAQASG GTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

A0A6J1I9A2 LOW QUALITY PROTEIN: uncharacterized protein LOC111472255

8.9e-75

94.37

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Query:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS
        MPGFGVFPLGSCFDGCRDH QASG GTRIWNLSDRPVELQIRVG ILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHE+GGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDS

Query:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        +RMV QQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  IRMVNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06145.1 unknown protein

2.4e-40

57.04

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Query:  LGSCFDGCRDH-----AQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDSIRM
        L  C+ GC D         +   TR WNLSDRPVELQIRVGSILK+VH+LKPG SK+L+ +SI++AY+  +  +  L YYD+ C PYVW+HETG D  +M
Subjt:  LGSCFDGCRDH-----AQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDSIRM

Query:  VNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR
        V QQ++SLEDLR++SEIR+F+D QRGCV+V K+ R
Subjt:  VNQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR

Sequences

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CDS sequence

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ATGCCCGGGTTCGGCGTTTTCCCTCTCGGTAGCTGTTTCGATGGCTGTCGAGACCACGCGCAGGCGTCGGGATTGGGGACTCGAATATGGAACTTGAGCGACAGGCCGGT
GGAGCTGCAGATAAGGGTGGGATCAATATTGAAAAAAGTTCATAGTTTGAAGCCAGGATGCTCAAAGAGGCTGAAATGTAAGAGCATTTACAAAGCATACATGCCAGGAA
GGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATTCATGAAACTGGAGGTGATTCCATCAGAATGGTCAACCAACAATTCATCAGT
CTTGAAGATTTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAGCGCGGTTGCGTATCGGTTCGAAAGAAACCGAGGCCCGATTTTTGCTGA

mRNA sequence

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GGATTGATGGTTTTATGTGACAAAAACAGAACCAACATTTGCAATGCCCGGGTTCGGCGTTTTCCCTCTCGGTAGCTGTTTCGATGGCTGTCGAGACCACGCGCAGGCGT
CGGGATTGGGGACTCGAATATGGAACTTGAGCGACAGGCCGGTGGAGCTGCAGATAAGGGTGGGATCAATATTGAAAAAAGTTCATAGTTTGAAGCCAGGATGCTCAAAG
AGGCTGAAATGTAAGAGCATTTACAAAGCATACATGCCAGGAAGGAGTATGAAGAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATTCATGAAAC
TGGAGGTGATTCCATCAGAATGGTCAACCAACAATTCATCAGTCTTGAAGATTTAAGGGAGTTTTCTGAGATCAGAATCTTTAGGGATCATCAGCGCGGTTGCGTATCGG
TTCGAAAGAAACCGAGGCCCGATTTTTGCTGATTCTTCTTCTTCTTCTTCTTCATACTCAAAAATGTTGTCTTTAATTTGAACTTTGTAACCTTTATATGAATGTTATTG
TTCTTGCTTTCCAATTCTGTTATGTCTATTGTCAAACTCTCTTTCCCTGTTTGCTTTTTTTGTTTGGGAATTCAAGAAAAT

Protein sequence

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MPGFGVFPLGSCFDGCRDHAQASGLGTRIWNLSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGRSMKSLLYYYDEACQPYVWIHETGGDSIRMVNQQFIS
LEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC

Tan0011108 (gene) of Snake gourd v1 genome