CuGenDBv2

Gene ID	Tan0011177
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	LG07:9650289..9654993
RNA-Seq Expression	Tan0011177
Synteny	Tan0011177
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

5.6e-157

82.2

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVH YCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+ R
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

XP_022957637.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]

7.4e-157

81.92

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSP+ND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+ R
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

1.8e-158

82.77

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Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+QR
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

1.8e-158

82.77

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+QR
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

XP_023533198.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo]

3.9e-158

82.49

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Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRS+A+QR
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

3.1e-153

81.3

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED+FHL+FTRIT KSPDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDE
        CNEAGVKAELC NEGC VRVH+YCLKKMLSNKKSKRACPGCGT+WRST                                         +NMES+EEEDE
Subjt:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDE

Query:  PDTRTQGQSSSHKRKKSRLNIDIDSGPNGDSTAQASQPPPYTRRVTRSSANQR
        PD RTQGQSSS +RKKSRLNID+DS  NG   A ASQPPP TRRVTRSSA QR
Subjt:  PDTRTQGQSSSHKRKKSRLNIDIDSGPNGDSTAQASQPPPYTRRVTRSSANQR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

3.1e-153

81.3

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED+FHL+FTRIT KSPDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDE
        CNEAGVKAELC NEGC VRVH+YCLKKMLSNKKSKRACPGCGT+WRST                                         +NMES+EEEDE
Subjt:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDE

Query:  PDTRTQGQSSSHKRKKSRLNIDIDSGPNGDSTAQASQPPPYTRRVTRSSANQR
        PD RTQGQSSS +RKKSRLNID+DS  NG   A ASQPPP TRRVTRSSA QR
Subjt:  PDTRTQGQSSSHKRKKSRLNIDIDSGPNGDSTAQASQPPPYTRRVTRSSANQR

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

3.6e-157

81.92

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSP+ND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+ R
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

8.5e-159

82.77

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+QR
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

8.5e-159

82.77

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHLLFTRITEKSPDND+QLFN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP
        NEAGVKAELCSNEGC VRVHRYCLKKMLSNKKSKRACP CGTQWRSTAP                                        N+E +EEEDEP
Subjt:  NEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEP

Query:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR
        D R QGQSSSHKRKK+RLN DIDSGPNGDS   AQASQPPP TRR+TRSSA+QR
Subjt:  DTRTQGQSSSHKRKKSRLNIDIDSGPNGDS--TAQASQPPPYTRRVTRSSANQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

2.5e-06

20.21

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Query:  ELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDN-DQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY
        +++  H   +Q L++ G +       L     E    N      + ++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  +
Subjt:  ELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDN-DQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY

Query:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP
        +  +E I    S  G    I+ L+L  E Q                  S  +K+K + +L     QD+WL    +G   L  R  ++L  +      D+ 
Subjt:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP

Query:  S-CEVCNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKS
          C VC++  ++ +LC N  C + +H  C   +     +   CP C   W    P++     +    ++       ++R ++
Subjt:  S-CEVCNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKS

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.1e-09

21.66

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Query:  HHTLIQALLARGPLREDRFHLLFTRITE-KSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE
        H   +QAL++ G +       L     E           + ++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E
Subjt:  HHTLIQALLARGPLREDRFHLLFTRITE-KSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE

Query:  AIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV
         I    S  G  ++I+ L+L  E Q                  S  +K+K + +L     Q++WL    +G   L  R  ++L  + R    D+   C V
Subjt:  AIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV

Query:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKS
        C +  ++++LC N  C + +H  C  K   + K+   CP C   W    P++     +    ++T      ++R K+
Subjt:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

1.8e-89

54.29

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Query:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQS-QVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +AQG IS+  AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQS-QVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQW-RSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEED
        CNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C GCG  W  S     E+ EE    +  +  Q+++ K K+ R     DS  N S+  S     
Subjt:  CNEAGVKAELCSNEGCAVRVHRYCLKKMLSNKKSKRACPGCGTQW-RSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEED

Query:  EPDTRTQGQSSSHKR
          +TR   +S  H R
Subjt:  EPDTRTQGQSSSHKR

Sequences

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CDS sequence

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ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCGGTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAG
TCCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCTTGACGATTAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGCGGGGCTGCAGAAACCAATATGATGGTCGTG
TTTACTATGGCTTGGTGAATAATGTATCTGACGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAA
GATCCATCTGCTCAAGGTGGAATATCGAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCCCAGGTCATACCACCTGCTTTCAA
GAATTTCTCGATCTCTCTCAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTG
ATTTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGTTGCGCTGTTCGTGTACAT
CGGTATTGCCTCAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGTCCAGGTTGTGGCACACAATGGCGATCTACAGCACCCAATATGGAGTCCAGGGAGGAGGA
GGACGAGCCAGATACGCGCACTCGAGACCAGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAGACATTGATTCAGAACCAAATAGATCTAATATGGAGTCCA
GGGAAGAAGAGGATGAGCCAGATACGCGCACTCAAGGCCAGTCATCATCACATAAGAGGAAGAAATCCAGACTGAACATAGATATTGATTCAGGACCAAATGGAGACAGT
ACGGCGCAAGCTTCCCAACCTCCTCCATATACAAGAAGAGTAACGCGAAGTTCTGCAAACCAGCGACCATAG

mRNA sequence

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AAAAGTTGCATATCCTCGTTGGAGTAAAAGGGCAACCTTTCCCGCCTTCTGAAAGCGGATACCCTTCGCGAAACTCATTTCTGGGGTTCAGAATGCGGGAGCTGAGTTGG
AGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCGGTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCAGCA
GCTTTTTAATAGTTACCTCTTGACGATTAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGCGGGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTGA
ATAATGTATCTGACGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGT
GGAATATCGAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCCCAGGTCATACCACCTGCTTTCAAGAATTTCTCGATCTCTCT
CAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCC
GCACTAATGATATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGTTGCGCTGTTCGTGTACATCGGTATTGCCTCAAGAAA
ATGTTATCCAATAAAAAGAGTAAAAGGGCTTGTCCAGGTTGTGGCACACAATGGCGATCTACAGCACCCAATATGGAGTCCAGGGAGGAGGAGGACGAGCCAGATACGCG
CACTCGAGACCAGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAGACATTGATTCAGAACCAAATAGATCTAATATGGAGTCCAGGGAAGAAGAGGATGAGC
CAGATACGCGCACTCAAGGCCAGTCATCATCACATAAGAGGAAGAAATCCAGACTGAACATAGATATTGATTCAGGACCAAATGGAGACAGTACGGCGCAAGCTTCCCAA
CCTCCTCCATATACAAGAAGAGTAACGCGAAGTTCTGCAAACCAGCGACCATAGCAGTGGTTCTCCATTCTTGTCATCCTTACATGCAAGGAACGAGCTGTTCCATGGTA
AAGATTATTATTTTTTTTTTCTTTTTGTACCTAGGACAGTTTGATTGTGTTGAGCAGAATTATTAGGCGAATTATATAAAATATCCTTGTACTTTGCCCTTTGTTAAAAA
CCACCCATATTCTTTCAAAAGTTGTAATATTATTCTTGATCTTCGGTAAATGTTTCAAAACTGCTATTGGAGTAGAAATTAGTTAGAATGTTGGGTAAGAATTCAACCGA
TGACTAGAACATTTGCTTGTATTAAGTTTGAAAGAACGGTATTTCTATTTTTCGATCAATATTTTAACAGTTTTTCTACTTCAAGGATAGTTTTGAAACATTTATGAAAG
GTCAAATGTAATATTGTAACTTTTAAAAGGA

Protein sequence

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MRELSWRHHTLIQALLARGPLREDRFHLLFTRITEKSPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCAVRVH
RYCLKKMLSNKKSKRACPGCGTQWRSTAPNMESREEEDEPDTRTRDQSSSHKRKKSRLNIDIDSEPNRSNMESREEEDEPDTRTQGQSSSHKRKKSRLNIDIDSGPNGDS
TAQASQPPPYTRRVTRSSANQRP

Tan0011177 (gene) of Snake gourd v1 genome