; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011180 (gene) of Snake gourd v1 genome

Gene IDTan0011180
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG05:59602488..59604052
RNA-Seq ExpressionTan0011180
SyntenyTan0011180
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012717.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-14188.93Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLN+N  K IKIREVWASNLESEF+LIRD ID FPCVSMDTEFPGIVFT PT P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR

Query:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        V FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]4.1e-14288.85Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT
        MV +DL NN +KPI+IREVWASNLESEFELIRD+IDQFPCVSMDTEFPG+VFTDP  PY+ QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT

Query:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV
          SRFIWEFNFMDFDVARD HAPDSI+LLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++ LP+RLEEFLGVLRV
Subjt:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV

Query:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FFGD VYDVKY+MRFCK+LYGGLDRIAK+LNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Subjt:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.8e-14289.29Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNNN  K IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVFT PT P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR

Query:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        V FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]1.8e-14288.93Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNNN  K IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVFT PT P+N+ NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+RLPNR++EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR

Query:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        V FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

XP_023541056.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]5.8e-14188.61Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR--PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL
        MV+ DLNNN  K IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVFT PT P+NA NR   SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDL
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR--PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL

Query:  GTDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVL
        GTDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNRL+EFLGVL
Subjt:  GTDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVL

Query:  RVFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        RV FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  RVFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease1.5e-12981.72Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT
        M+  DLN N +K I+IREVWASNLESEF LIRD+IDQFPCVSMDTEFPG++F     P  + N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT

Query:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV
         D+RFIWEFNF DFDVARD HAP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILT Q+LP  LE+FLGV+R+
Subjt:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV

Query:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        FFGDNVYD+KY+MRFC++LYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLEVF
Subjt:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease1.6e-12880.85Show/hide
Query:  MVNEDLNNND---NKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPD
        M+  DLN N    +KPI+IREVWASNL+SEF LI D+ID+FPCVSMDTEFPG++F   T P    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPD
Subjt:  MVNEDLNNND---NKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPD

Query:  LGTDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGV
        LGT D+RFIWEFNF DFDVARD HAPDSI+LLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQQ+LP  LEEFLGV
Subjt:  LGTDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGV

Query:  LRVFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        +RVFFGDNVYD+KY+MRFC++LYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ E+ KHAGVLYGLEVF
Subjt:  LRVFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease2.0e-14288.85Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT
        MV +DL NN +KPI+IREVWASNLESEFELIRD+IDQFPCVSMDTEFPG+VFTDP  PY+ QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT

Query:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV
          SRFIWEFNFMDFDVARD HAPDSI+LLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++ LP+RLEEFLGVLRV
Subjt:  DDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRV

Query:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        FFGD VYDVKY+MRFCK+LYGGLDRIAK+LNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Subjt:  FFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease8.8e-14389.29Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNNN  K IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVFT PT P+NA NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR

Query:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        V FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

A0A6J1HU54 Poly(A)-specific ribonuclease8.8e-14388.93Show/hide
Query:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG
        MV+ DLNNN  K IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVFT PT P+N+ NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLG
Subjt:  MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSIDLLRRQGIDFDRNR EGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+RLPNR++EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLR

Query:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        V FGDNVYDVKY+MRFCK+LYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE F
Subjt:  VFFGDNVYDVKYIMRFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.4e-10871.27Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFM
        I IR+VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF 
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYI
        DFDV RD HAPDSI+LLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+++LP  L EFLG+LR FFGD VYDVK+I
Subjt:  DFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYI

Query:  MRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        MRFC + LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLEVF
Subjt:  MRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 102.2e-7453.58Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I IREVW  NL  EF LIR+++D+F  ++MDTEFPG+V   P   +   N    +YR LK NVD L LIQ+G+T SD +GNLP  GT D   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        F++  D +A +SI+LLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
         FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ +F     EK+ GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 93.4e-10769.42Show/hide
Query:  NNDNKP----IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS
        N D KP    +  REVWA NLESEFELI ++ID +P +SMDTEFPG++F       N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  
Subjt:  NNDNKP----IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFF
        R FIWEFNF DFDVARD HAPDSI+LLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  V+RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFF

Query:  GDNVYDVKYIMRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        G+ VYDVK++M+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEVF
Subjt:  GDNVYDVKYIMRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.2e-7553.96Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     T    ++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        FD+  D  A DSI+LL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+   +F  ++ V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +FC +L+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.5e-7855.47Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I+IREVW  NLESE  LIR+V+D FP V+MDTEFPGIV     T    +     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        FD+  D +A DSI+LLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +FC +L+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-7753.96Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     T    ++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        FD+  D  A DSI+LL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+   +F  ++ V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +FC +L+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-7753.96Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     T    ++    HY  LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        FD+  D  A DSI+LL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+   +F  ++ V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +FC +L+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-7955.47Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD
        I+IREVW  NLESE  LIR+V+D FP V+MDTEFPGIV     T    +     HY  LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM
        FD+  D +A DSI+LLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ V+F   VYD+K++M
Subjt:  FDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIM

Query:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV
        +FC +L+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL V
Subjt:  RFCKTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-10869.42Show/hide
Query:  NNDNKP----IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS
        N D KP    +  REVWA NLESEFELI ++ID +P +SMDTEFPG++F       N    P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  
Subjt:  NNDNKP----IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFF
        R FIWEFNF DFDVARD HAPDSI+LLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  V+RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFF

Query:  GDNVYDVKYIMRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        G+ VYDVK++M+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEVF
Subjt:  GDNVYDVKYIMRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-11071.27Show/hide
Query:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFM
        I IR+VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF 
Subjt:  IKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYI
        DFDV RD HAPDSI+LLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+++LP  L EFLG+LR FFGD VYDVK+I
Subjt:  DFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYI

Query:  MRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF
        MRFC + LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLEVF
Subjt:  MRFC-KTLYGGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACGAGGATCTGAACAACAATGACAATAAACCCATTAAAATCCGTGAAGTTTGGGCCTCTAATCTCGAATCCGAGTTTGAGTTGATCCGTGATGTGATCGATCA
GTTTCCGTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTTTTCACCGATCCCACGACACCCTACAACGCTCAAAATCGGCCCTCCGATCACTACAGGCTTCTCAAAT
CCAACGTCGATGCTCTGAATCTCATTCAGATCGGGATCACTCTCTCCGATTCGGACGGCAACCTGCCAGATCTCGGCACCGACGACAGCCGATTCATCTGGGAGTTCAAC
TTCATGGACTTCGACGTGGCGCGTGACTTCCACGCACCGGATTCCATCGACCTCCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGTGCCGAAGGGATCGACTCGTG
CCGGTTCGCCGAGTTGATGATGTCATCGGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTAGTTAAGATTTTGACTC
AACAGAGGCTTCCGAATCGGCTAGAGGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAATGTGTACGATGTGAAGTACATTATGCGGTTCTGCAAGACCCTCTAC
GGCGGCTTGGACCGGATTGCGAAAGTGTTGAATGTGAACCGGGCGGTTGGAAAATGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAG
GGACACCTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGGGTTTTGTATGGATTGGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AATCTCTATAAAACCCCTCCTTCTTCCTTCTCTTTTCCATCCAAATCTCACATCTAACACTCACTATTAATTCCTCCATCAGATCAGATCTCAGGAATTCGGCCATGGTT
AACGAGGATCTGAACAACAATGACAATAAACCCATTAAAATCCGTGAAGTTTGGGCCTCTAATCTCGAATCCGAGTTTGAGTTGATCCGTGATGTGATCGATCAGTTTCC
GTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTTTTCACCGATCCCACGACACCCTACAACGCTCAAAATCGGCCCTCCGATCACTACAGGCTTCTCAAATCCAACG
TCGATGCTCTGAATCTCATTCAGATCGGGATCACTCTCTCCGATTCGGACGGCAACCTGCCAGATCTCGGCACCGACGACAGCCGATTCATCTGGGAGTTCAACTTCATG
GACTTCGACGTGGCGCGTGACTTCCACGCACCGGATTCCATCGACCTCCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGTGCCGAAGGGATCGACTCGTGCCGGTT
CGCCGAGTTGATGATGTCATCGGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTAGTTAAGATTTTGACTCAACAGA
GGCTTCCGAATCGGCTAGAGGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAATGTGTACGATGTGAAGTACATTATGCGGTTCTGCAAGACCCTCTACGGCGGC
TTGGACCGGATTGCGAAAGTGTTGAATGTGAACCGGGCGGTTGGAAAATGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGACAC
CTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGGGTTTTGTATGGATTGGAGGTCTTCTAAATTAGAAAATGAATTAAATAAAAAAAAATTATTTATTATTTATTTA
TTTGGTAAATCAATGGGCCAAGTTATTTGACTACATTTTAACTTTTTTTTTTCTCTTTTGTTTTTTTAATTTTGTTAAAAGATGACTATATTGGAAATTGGATGCAGACA
ATGTCGCCCCAATGTTATTCAATAGAATAATTATATAGGTTTAGACTAAATATTGAAAGGGTAAATAAATACATGCTTTAGTTCTTATTATTTAAAAACTTTGAGTCAAG
AGCGTATCTGAGAGTTTATTTTGGGGAGTCCAATGTTAAATAACATTTTTTTTTTGTCAAAAACAAACCCAATTTATACTAGAAAGTTAGGAGTAATGAACTTAAACAAA
TGCAATTTATAGTACAAAATTAGGAGCAATGAACATAAAAACAAACCTAGGAGCAATGGACTAAAAAAAGGTAAATTTAGCAAAATTTAGATAAAATATTAAGAAAATAG
CAACTAAAAAGTAATTAAAATATACTGAGTTCAGAATATATAATCAATAATTATTGTTAATCACAATTATTGTATATTTAAATTAGTGATCAATTTATGGTAATCAAATA
TTTTCTTAAAAAAAAATGTTATTTC
Protein sequenceShow/hide protein sequence
MVNEDLNNNDNKPIKIREVWASNLESEFELIRDVIDQFPCVSMDTEFPGIVFTDPTTPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFN
FMDFDVARDFHAPDSIDLLRRQGIDFDRNRAEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQRLPNRLEEFLGVLRVFFGDNVYDVKYIMRFCKTLY
GGLDRIAKVLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVF