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Tan0011212 (gene) of Snake gourd v1 genome

Gene IDTan0011212
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionOrf129b protein
Genome locationLG05:75515795..75516172
RNA-Seq ExpressionTan0011212
SyntenyTan0011212
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_064025.1 orf129b gene product [Beta vulgaris subsp. vulgaris]1.7e-2376.62Show/hide
Query:  RETLLREGRLASRASRDGAFWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSG
        ++ LLREGRLASR      F  +KSISGHQTLQLMRRPYG+KGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G
Subjt:  RETLLREGRLASRASRDGAFWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSG
XP_016549454.1 PREDICTED: uncharacterized mitochondrial protein AtMg00660-like [Capsicum annuum]2.9e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
YP_004222269.1 hypothetical protein BevumaM_p030 [Beta vulgaris subsp. maritima]3.8e-2374.67Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYG+KGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
YP_009049646.1 hypothetical protein [Capsicum annuum]2.9e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
YP_173434.1 hypothetical protein NitaMp095 [Nicotiana tabacum]2.9e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
TrEMBL top hitse value%identityAlignment
A0A075VT34 Uncharacterized protein1.4e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
A0A2G2Y0Y3 uncharacterized mitochondrial protein AtMg00660-like1.4e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
A0A5P9S2L0 Uncharacterized protein1.4e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
Q5M9X9 uncharacterized mitochondrial protein AtMg00660-like1.4e-2376Show/hide
Query:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
        F  +KSISGHQTLQLMRRPYGVKGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G  D  LKA HD    P+
Subjt:  FWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPS
Q9MFB4 Orf129b protein8.2e-2476.62Show/hide
Query:  RETLLREGRLASRASRDGAFWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSG
        ++ LLREGRLASR      F  +KSISGHQTLQLMRRPYG+KGSV+VVTLPAFQRCL+DGPDAAERRPGS FPT  G
Subjt:  RETLLREGRLASRASRDGAFWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGAGAAACCCTACTGCGAGAGGGACGCCTCGCAAGCCGGGCTTCTAGAGATGGGGCCTTTTGGCGAAGCAAGTCAATTTCGGGGCACCAAACCCTGCAACTGAT
GAGAAGGCCCTATGGAGTAAAGGGAAGCGTGCACGTTGTCACACTCCCTGCCTTTCAAAGGTGCCTAAAGGACGGGCCAGACGCAGCAGAGCGACGACCCGGGAGCAGAT
TCCCCACCGACAGTGGGATAAGAGACGACCGTCTCAAGGCACAACACGACTCTCTGGTCTTTCCATCCGTCTACAACTTTTTTATTATTCATCCTACATTCGCCCTTTTG
TTAGCTTCTCTTCGATCAACCCAGGTTCGGGTGGAAGGGGAGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGAGAAACCCTACTGCGAGAGGGACGCCTCGCAAGCCGGGCTTCTAGAGATGGGGCCTTTTGGCGAAGCAAGTCAATTTCGGGGCACCAAACCCTGCAACTGAT
GAGAAGGCCCTATGGAGTAAAGGGAAGCGTGCACGTTGTCACACTCCCTGCCTTTCAAAGGTGCCTAAAGGACGGGCCAGACGCAGCAGAGCGACGACCCGGGAGCAGAT
TCCCCACCGACAGTGGGATAAGAGACGACCGTCTCAAGGCACAACACGACTCTCTGGTCTTTCCATCCGTCTACAACTTTTTTATTATTCATCCTACATTCGCCCTTTTG
TTAGCTTCTCTTCGATCAACCCAGGTTCGGGTGGAAGGGGAGAGGTGA
Protein sequenceShow/hide protein sequence
MRRETLLREGRLASRASRDGAFWRSKSISGHQTLQLMRRPYGVKGSVHVVTLPAFQRCLKDGPDAAERRPGSRFPTDSGIRDDRLKAQHDSLVFPSVYNFFIIHPTFALL
LASLRSTQVRVEGER