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Tan0011245 (gene) of Snake gourd v1 genome

Gene IDTan0011245
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG10:32347742..32348008
RNA-Seq ExpressionTan0011245
SyntenyTan0011245
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]2.2e-2577.22Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        MVTAKEIM SLQA+FGQPSSS  +DA+K+VYN RMKEG +VREHVLDMM HFN+ EVN AV++E+SQV FIMESLPKSF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]6.3e-2575.95Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        MV AKEIM SLQA+FGQPSSS  +DA+KYVYN RMKEG +VREHVLDMM HFN+ EVNGAV++E++Q  FIMESLPKSF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.5e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

A0A5A7TU93 Gag/pol protein1.5e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

A0A5A7TWB9 Gag/pol protein1.5e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

A0A5A7V4M1 Gag/pol protein1.5e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

A0A5D3CPJ6 Gag/pol protein1.5e-2473.42Show/hide
Query:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF
        M+TA+EIM SLQ MFGQ S  + +DA+KY+YN+RM EGASVREHVL+MM HFNVAE+NGAVIDE SQV+FI+ESLP+SF
Subjt:  MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACAGCAAAGGAGATCATGGGATCATTACAGGCGATGTTTGGACAACCGTCCTCATCGGTCCATTATGATGCTGTCAAATACGTTTACAACTCCCGTATGAAGGA
GGGAGCCTCTGTTAGGGAACATGTCCTTGACATGATGACCCACTTCAACGTGGCTGAAGTAAATGGGGCAGTCATAGATGAGAGAAGTCAGGTAACTTTTATTATGGAAT
CTCTTCCAAAGAGTTTCTGCCATTCGCACAAATGCGGTAATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCACAGCAAAGGAGATCATGGGATCATTACAGGCGATGTTTGGACAACCGTCCTCATCGGTCCATTATGATGCTGTCAAATACGTTTACAACTCCCGTATGAAGGA
GGGAGCCTCTGTTAGGGAACATGTCCTTGACATGATGACCCACTTCAACGTGGCTGAAGTAAATGGGGCAGTCATAGATGAGAGAAGTCAGGTAACTTTTATTATGGAAT
CTCTTCCAAAGAGTTTCTGCCATTCGCACAAATGCGGTAATGAATAA
Protein sequenceShow/hide protein sequence
MVTAKEIMGSLQAMFGQPSSSVHYDAVKYVYNSRMKEGASVREHVLDMMTHFNVAEVNGAVIDERSQVTFIMESLPKSFCHSHKCGNE