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Tan0011250 (gene) of Snake gourd v1 genome

Gene IDTan0011250
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4219 domain-containing protein
Genome locationLG07:68957152..68957439
RNA-Seq ExpressionTan0011250
SyntenyTan0011250
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAG60117.1 copia-type polyprotein, putative [Arabidopsis thaliana]5.4e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
CAB75469.1 copia-type reverse transcriptase-like protein [Arabidopsis thaliana]5.4e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
PKU71906.1 hypothetical protein MA16_Dca021744 [Dendrobium catenatum]9.9e-3272.63Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASN M+ FQVP  N SNYDNWSIKMKA LG QDVWE++EKG+ EP+++ SL Q Q+D+LRDSRKRDKKALYLI+QGLDDD+FEKI +AK+ KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
XP_020688719.2 uncharacterized protein LOC110104092 [Dendrobium catenatum]4.4e-3271.58Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASN M+ FQVP  N SNYDNWSIKMKA LG+QDVWE++EKG+ EP+++ SL Q Q+D+LRDSRKRDKKALYLI+QGLDDD+FEK+S+ K+ KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
XP_028556025.1 uncharacterized protein LOC110109975 [Dendrobium catenatum]6.8e-3373.68Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASN M+ FQVP  N SNYDNWSIKMKA LG+QDVWE++EKG++EP+++ SL Q Q+D+LRDSRKRDKKALYLI+QGLDDD+FEKIS+AK+ KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
TrEMBL top hitse value%identityAlignment
A0A2I0W8B3 DUF4219 domain-containing protein4.8e-3272.63Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASN M+ FQVP  N SNYDNWSIKMKA LG QDVWE++EKG+ EP+++ SL Q Q+D+LRDSRKRDKKALYLI+QGLDDD+FEKI +AK+ KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
Q9C536 Copia-type polyprotein, putative2.6e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
Q9C739 Copia-type polyprotein, putative2.6e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
Q9M2D1 Copia-type polyprotein2.6e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
Q9SXB2 T28P6.8 protein2.6e-3074.74Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + KEA
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein3.3e-3373.4Show/hide
Query:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKE
        MASNN V FQVPV  KSNYDNWS++MKA LG+ DVWEIVEKG  EPEN+GSL Q Q+D LRDSRKRDKKAL LIYQGLD+D FEK+ EA + K+
Subjt:  MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTAACAACATGGTCTCGTTCCAAGTCCCAGTGTTCAACAAGAGTAACTACGATAATTGGAGCATCAAGATGAAGGCTCCTCTTGGATCGCAAGATGTATGGGA
GATAGTAGAGAAAGGGCACTCCGAGCCGGAGAATGATGGTAGTCTTTTTCAAATACAAAGGGATAATTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAA
TCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACGACAAAAGAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTAACAACATGGTCTCGTTCCAAGTCCCAGTGTTCAACAAGAGTAACTACGATAATTGGAGCATCAAGATGAAGGCTCCTCTTGGATCGCAAGATGTATGGGA
GATAGTAGAGAAAGGGCACTCCGAGCCGGAGAATGATGGTAGTCTTTTTCAAATACAAAGGGATAATTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCTAA
TCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACGACAAAAGAAGCATGA
Protein sequenceShow/hide protein sequence
MASNNMVSFQVPVFNKSNYDNWSIKMKAPLGSQDVWEIVEKGHSEPENDGSLFQIQRDNLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTTKEA