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Tan0011262 (gene) of Snake gourd v1 genome

Gene IDTan0011262
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLate embryogenesis abundant protein
Genome locationLG03:74815709..74816545
RNA-Seq ExpressionTan0011262
SyntenyTan0011262
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441122.1 PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]3.8e-3772.06Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED
        MINAIRFGR PP  VLT PLPPQLRR   S ELRS Q  GFATAPDQNP  + MD+S+N  KE GDIM  SFGEGYATR +EEGFGGTY GN   DDDE+
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED

Query:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HAN
Subjt:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

XP_011658492.1 uncharacterized protein LOC101219972 [Cucumis sativus]2.2e-3773.53Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGN-QSIDDDED
        MINAIRFGR PP  VLT PLPP+LRR SSPEL S Q I FATAPD+NP  + MDDS+N  KE GDIM  SFGEGYATR +EEGFGGTY G  QSIDDDE 
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGN-QSIDDDED

Query:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
          NKK V   N  EYDKSQGSEVKEKEKSRHQ HAN
Subjt:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

XP_022133090.1 uncharacterized protein LOC111005770 [Momordica charantia]7.5e-4678.36Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAP-DQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDAD
        M +AIR GR+PP SVLT PLPPQLRRRSSPELRS QVIG ATAP DQ+  NMDDS+NT K+ GDIMSHSFGEGYATR DEEGFGG Y GN+S  DD+D +
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAP-DQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDAD

Query:  NKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
         K  VIHENHPEYDKSQGSEVKEKE SRHQTHAN
Subjt:  NKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

XP_023543426.1 uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo]1.1e-3668.66Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN
        MINAIRFGR+PP  VLT+PLPPQLRR  +PELRS Q IGF+TAPDQNPQNMDDS+NTAK+ GDIM+ SFG  YA R + EGFGG YR  +S   +E A+N
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN

Query:  KKSVIHENHPEYDKSQGSEVKEKEKSRHQTHANC
        +K        EYDKSQGSEVKEKEK+RHQTH+NC
Subjt:  KKSVIHENHPEYDKSQGSEVKEKEKSRHQTHANC

XP_038883658.1 uncharacterized protein LOC120074572 [Benincasa hispida]5.2e-3972.93Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN
        MINAIRFGR PP  VLT PLPPQLRR  SPELRS Q IG ATAPDQN  +MDDS+N AKE GDIM  SFGE YATR +EEGFGGTY  NQ  DD  + DN
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN

Query:  KKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
        KK   H N  EYDKSQG EVKEKEKSRHQ HAN
Subjt:  KKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

TrEMBL top hitse value%identityAlignment
A0A0A0KGG3 Uncharacterized protein1.1e-3773.53Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGN-QSIDDDED
        MINAIRFGR PP  VLT PLPP+LRR SSPEL S Q I FATAPD+NP  + MDDS+N  KE GDIM  SFGEGYATR +EEGFGGTY G  QSIDDDE 
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGN-QSIDDDED

Query:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
          NKK V   N  EYDKSQGSEVKEKEKSRHQ HAN
Subjt:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

A0A1S3B3C5 uncharacterized protein LOC1034853501.8e-3772.06Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED
        MINAIRFGR PP  VLT PLPPQLRR   S ELRS Q  GFATAPDQNP  + MD+S+N  KE GDIM  SFGEGYATR +EEGFGGTY GN   DDDE+
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED

Query:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HAN
Subjt:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

A0A5D3CN97 Late embryogenesis abundant protein1.8e-3772.06Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED
        MINAIRFGR PP  VLT PLPPQLRR   S ELRS Q  GFATAPDQNP  + MD+S+N  KE GDIM  SFGEGYATR +EEGFGGTY GN   DDDE+
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRR-SSPELRSHQVIGFATAPDQNP--QNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDED

Query:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
          NKKSV   N  EYD+SQGSEVKEKEKSRHQ HAN
Subjt:  ADNKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

A0A6J1BUB9 uncharacterized protein LOC1110057703.7e-4678.36Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAP-DQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDAD
        M +AIR GR+PP SVLT PLPPQLRRRSSPELRS QVIG ATAP DQ+  NMDDS+NT K+ GDIMSHSFGEGYATR DEEGFGG Y GN+S  DD+D +
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAP-DQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDAD

Query:  NKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN
         K  VIHENHPEYDKSQGSEVKEKE SRHQTHAN
Subjt:  NKKSVIHENHPEYDKSQGSEVKEKEKSRHQTHAN

A0A6J1IUE6 uncharacterized protein LOC1114785137.6e-3665Show/hide
Query:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN
        MINAIRFGR+PP  VLT+PLPPQLRR  SPELRS Q+IGF+TAPDQNP+NMDDS+NTAK+ GDIM+ SFG+ YA R + EGFGG YR  +S   +  A+N
Subjt:  MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKE-GDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADN

Query:  KKSVIHENHPEYDKSQGSEVKEK------EKSRHQTHANC
        +K       PEYDKSQGSEVKE+      EK+RHQTH+NC
Subjt:  KKSVIHENHPEYDKSQGSEVKEK------EKSRHQTHANC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66780.1 unknown protein4.3e-2346.83Show/hide
Query:  NPPRSVLTIPLPPQLRRRSSPELRSHQVIG--FATAPDQNPQNMDDSRNTAKEGDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADNKKSVIHEN
        N  +++ ++P    +   S+P     +V G  FAT  DQ   +        K GD+MSHS+GEGYATR DEEGFGG Y GNQ++        K++ IHEN
Subjt:  NPPRSVLTIPLPPQLRRRSSPELRSHQVIG--FATAPDQNPQNMDDSRNTAKEGDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADNKKSVIHEN

Query:  HPEYDKSQGSEVKEKEKSRHQTHANC
        HP+YDK+QGSE KEKEK+R+QT ++C
Subjt:  HPEYDKSQGSEVKEKEKSRHQTHANC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACGCAATCAGATTCGGCCGTAATCCACCGCGGAGCGTGCTCACAATTCCTCTTCCGCCGCAGCTCCGCCGTAGAAGCTCGCCTGAGCTCCGATCTCATCAAGT
GATCGGTTTCGCCACCGCACCTGATCAGAACCCACAGAACATGGACGACTCTCGGAACACTGCCAAGGAAGGAGATATAATGTCTCATTCCTTTGGAGAAGGCTATGCGA
CCAGATGTGATGAAGAAGGATTCGGAGGCACTTACAGAGGCAATCAGTCAATTGACGACGATGAGGACGCCGATAATAAGAAGTCGGTTATTCACGAGAATCACCCAGAA
TATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCTCGCCATCAGACCCATGCAAACTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAACGCAATCAGATTCGGCCGTAATCCACCGCGGAGCGTGCTCACAATTCCTCTTCCGCCGCAGCTCCGCCGTAGAAGCTCGCCTGAGCTCCGATCTCATCAAGT
GATCGGTTTCGCCACCGCACCTGATCAGAACCCACAGAACATGGACGACTCTCGGAACACTGCCAAGGAAGGAGATATAATGTCTCATTCCTTTGGAGAAGGCTATGCGA
CCAGATGTGATGAAGAAGGATTCGGAGGCACTTACAGAGGCAATCAGTCAATTGACGACGATGAGGACGCCGATAATAAGAAGTCGGTTATTCACGAGAATCACCCAGAA
TATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCTCGCCATCAGACCCATGCAAACTGCTAG
Protein sequenceShow/hide protein sequence
MINAIRFGRNPPRSVLTIPLPPQLRRRSSPELRSHQVIGFATAPDQNPQNMDDSRNTAKEGDIMSHSFGEGYATRCDEEGFGGTYRGNQSIDDDEDADNKKSVIHENHPE
YDKSQGSEVKEKEKSRHQTHANC