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Tan0011272 (gene) of Snake gourd v1 genome

Gene IDTan0011272
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionnon-classical arabinogalactan protein 30
Genome locationLG04:14188361..14188849
RNA-Seq ExpressionTan0011272
SyntenyTan0011272
Gene Ontology termsGO:0071944 - cell periphery (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599980.1 Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. sororia]8.5e-7685.54Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        MA K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ETNKYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPL DCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

XP_022942759.1 non-classical arabinogalactan protein 30 [Cucurbita moschata]3.2e-7584.94Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        M  K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ETNKYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPL DCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

XP_022996537.1 non-classical arabinogalactan protein 30 [Cucurbita maxima]2.5e-7584.94Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        MA K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ET+KYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPL DCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

XP_023541968.1 non-classical arabinogalactan protein 30 [Cucurbita pepo subsp. pepo]1.0e-7686.14Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        MA K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ETNKYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPLPDCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

XP_038893345.1 non-classical arabinogalactan protein 30 [Benincasa hispida]1.7e-7181.93Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADPN----LPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        M+ KNLLS+SLLLLLL IAAAD       P++VA+EG+VYCQSCQK+GTWSL+GAK I+GAKISVICKNHNNQVNFYKV+ETNK GYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADPN----LPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKPV SPL DC+LLTN+NYGL GAPLR++KKLVVGP YRAAVYAAGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

TrEMBL top hitse value%identityAlignment
A0A0A0KP60 Uncharacterized protein1.7e-6978.31Show/hide
Query:  MATKNLLSVSLLLLLLHIAAAD----PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        M+TKNLLS+S LLLLLHIA+AD    P+ P+++A+EG+VYCQ+C+KIGTWSLT AK I+GAKISVICKNHN+QV FYKV++TNK GYFYAELVGY+M HP
Subjt:  MATKNLLSVSLLLLLLHIAAAD----PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKPVSSPL DC+LLTN+NYGL GAPLRF+KK VVG  YRAAVYAAGPLAFHP+KCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

A0A1S3BZJ5 non-classical arabinogalactan protein 301.6e-6777.25Show/hide
Query:  MATKNLLSVS-LLLLLLHIAAAD----PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH
        M+TKNLLS+S LLLLLLHIA+A+    P+ P++VAVEG+VYCQ+C+K+GTWSLT AK I+GAKISVICKNHN+QV FYKV++TNK GYFYAELVGY+M H
Subjt:  MATKNLLSVS-LLLLLLHIAAAD----PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH

Query:  PVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        PVLDHPLQACKVKPVSSPL DC+LLTN+NYGL GAPLR++KK V+G  YRAAVYAAGPLAFHP+KCL
Subjt:  PVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

A0A6J1CYI2 non-classical arabinogalactan protein 305.4e-6070.48Show/hide
Query:  MATKNLLSVSLLLLLLHI-AAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH
        M  +NLLS+ +LLL +   AAADP    + PV + VEG+V+CQ+C++IG+WSLT  K IAGAK+SVICKN +NQVNFYKV++T+  GYFYAELVGYKMTH
Subjt:  MATKNLLSVSLLLLLLHI-AAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH

Query:  PVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKC
        PVLDHPLQ CKVK VSSPLP+CD LTNVNYGLAGAPLR++ K+V G  YRA VYAAGPLAFHPEKC
Subjt:  PVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKC

A0A6J1FS98 non-classical arabinogalactan protein 301.6e-7584.94Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        M  K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ETNKYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPL DCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

A0A6J1K278 non-classical arabinogalactan protein 301.2e-7584.94Show/hide
Query:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP
        MA K+LLS+SLLLLLLHIAAA+P      PVA+AVEGMVYCQ+CQKIG+WSLTGAK IAGAKISVICKNHNNQV+FYKV+ET+KYGYFYAELVGYKM HP
Subjt:  MATKNLLSVSLLLLLLHIAAADP----NLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHP

Query:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL
        VLDHPLQACKVKP+SSPL DCDLLTN+NYG+AGAPLR+DKK VVGPKYRAAVY+AGPLAFHPEKCL
Subjt:  VLDHPLQACKVKPVSSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL

SwissProt top hitse value%identityAlignment
O81417 Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN2.4e-0429.17Show/hide
Query:  ADPNLP--VAVAVEGMVYCQSCQKIGTWSLTGAKT-IAGAKISVICKNHNNQVNFYKVF--ETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLP
        ADP     + +AVEG++ C+S  K  T+ + GA   IA  K+      + N++    +   +T+  GYF A +   ++        +  CK     SPL 
Subjt:  ADPNLP--VAVAVEGMVYCQSCQKIGTWSLTGAKT-IAGAKISVICKNHNNQVNFYKVF--ETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLP

Query:  DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPE
        DCD  T+VN G+ G PL    +++    ++  +Y AGP  +  E
Subjt:  DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPE

P93013 Non-classical arabinogalactan protein 304.9e-1032.35Show/hide
Query:  VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLA
        VAV G+VYC++C+  G  ++ GAK +  A + ++CKN  N ++  K   T+K GYF   L+  K    V ++ ++ C+   V SP   C  +++++ G  
Subjt:  VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLA

Query:  GAPLR------FDKKLVVGPKYRAAVYAAGPLAFHP
        G+ L+      F   ++   KY  +VY  GP AF P
Subjt:  GAPLR------FDKKLVVGPKYRAAVYAAGPLAFHP

Q03211 Pistil-specific extensin-like protein5.7e-0631.53Show/hide
Query:  PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTN
        P L     V G+VYC+SC   G  +L  A  + GA + +IC      V +     T+  G F        M   +    +  CKV  V SP P+C++ TN
Subjt:  PNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTN

Query:  VNYGLAGAPLR
         N G +G  L+
Subjt:  VNYGLAGAPLR

Arabidopsis top hitse value%identityAlignment
AT2G33790.1 arabinogalactan protein 303.5e-1132.35Show/hide
Query:  VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLA
        VAV G+VYC++C+  G  ++ GAK +  A + ++CKN  N ++  K   T+K GYF   L+  K    V ++ ++ C+   V SP   C  +++++ G  
Subjt:  VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYGLA

Query:  GAPLR------FDKKLVVGPKYRAAVYAAGPLAFHP
        G+ L+      F   ++   KY  +VY  GP AF P
Subjt:  GAPLR------FDKKLVVGPKYRAAVYAAGPLAFHP

AT2G34700.1 Pollen Ole e 1 allergen and extensin family protein4.6e-1130.95Show/hide
Query:  LLSVSLLLLLLH-IAAADPNLPVA---------VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH
        LLS+SL  +  + +++A P  P +         VAVEGMVYC+SC+  G  +L  A  + GA + + C N    V      +T+K GYF+  L   K+T 
Subjt:  LLSVSLLLLLLH-IAAADPNLPVA---------VAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTH

Query:  PVLDHPLQACKVKPVSSPLP-----DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHP
            +    C+  P ++P P      C + + +N G+ GA L+  K + +G ++   +++ GP AF P
Subjt:  PVLDHPLQACKVKPVSSPLP-----DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHP

AT4G02270.1 root hair specific 131.7e-0529.17Show/hide
Query:  ADPNLP--VAVAVEGMVYCQSCQKIGTWSLTGAKT-IAGAKISVICKNHNNQVNFYKVF--ETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLP
        ADP     + +AVEG++ C+S  K  T+ + GA   IA  K+      + N++    +   +T+  GYF A +   ++        +  CK     SPL 
Subjt:  ADPNLP--VAVAVEGMVYCQSCQKIGTWSLTGAKT-IAGAKISVICKNHNNQVNFYKVF--ETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLP

Query:  DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPE
        DCD  T+VN G+ G PL    +++    ++  +Y AGP  +  E
Subjt:  DCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPE

AT5G05500.1 Pollen Ole e 1 allergen and extensin family protein1.8e-4762.22Show/hide
Query:  VAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYG
        V  AVEGMVYCQSC K G+WSL GA+ IAGAKIS+ICKNH  QV+FYKVF T+ YG+FY EL G+KMT   LDHPL +C+ K VSSP  DC+L +N+N  
Subjt:  VAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPVSSPLPDCDLLTNVNYG

Query:  LAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKC
        L GAPLR+++K +    Y A +YAAGPLAF P+ C
Subjt:  LAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCAAAAACCTCCTCTCCGTTTCCCTTCTCCTCCTCCTCCTCCACATCGCCGCCGCCGACCCGAACCTACCCGTCGCTGTCGCCGTCGAGGGCATGGTGTACTG
CCAAAGCTGCCAGAAAATCGGAACATGGTCCCTGACCGGCGCCAAGACGATCGCCGGAGCTAAAATCAGCGTGATTTGCAAGAATCATAACAACCAAGTGAACTTTTACA
AGGTCTTCGAAACCAACAAATATGGGTATTTTTACGCTGAGTTGGTCGGGTACAAGATGACCCACCCGGTTCTTGACCACCCGCTTCAGGCCTGCAAAGTCAAGCCGGTT
TCTTCCCCTCTGCCCGACTGTGACCTTCTGACCAATGTCAACTATGGCCTCGCCGGTGCGCCGCTCCGGTTTGATAAGAAGCTTGTCGTCGGCCCGAAGTATCGGGCGGC
AGTTTACGCCGCCGGTCCGTTGGCTTTCCACCCGGAGAAATGCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCAAAAACCTCCTCTCCGTTTCCCTTCTCCTCCTCCTCCTCCACATCGCCGCCGCCGACCCGAACCTACCCGTCGCTGTCGCCGTCGAGGGCATGGTGTACTG
CCAAAGCTGCCAGAAAATCGGAACATGGTCCCTGACCGGCGCCAAGACGATCGCCGGAGCTAAAATCAGCGTGATTTGCAAGAATCATAACAACCAAGTGAACTTTTACA
AGGTCTTCGAAACCAACAAATATGGGTATTTTTACGCTGAGTTGGTCGGGTACAAGATGACCCACCCGGTTCTTGACCACCCGCTTCAGGCCTGCAAAGTCAAGCCGGTT
TCTTCCCCTCTGCCCGACTGTGACCTTCTGACCAATGTCAACTATGGCCTCGCCGGTGCGCCGCTCCGGTTTGATAAGAAGCTTGTCGTCGGCCCGAAGTATCGGGCGGC
AGTTTACGCCGCCGGTCCGTTGGCTTTCCACCCGGAGAAATGCCTCTAG
Protein sequenceShow/hide protein sequence
MATKNLLSVSLLLLLLHIAAADPNLPVAVAVEGMVYCQSCQKIGTWSLTGAKTIAGAKISVICKNHNNQVNFYKVFETNKYGYFYAELVGYKMTHPVLDHPLQACKVKPV
SSPLPDCDLLTNVNYGLAGAPLRFDKKLVVGPKYRAAVYAAGPLAFHPEKCL