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Tan0011275 (gene) of Snake gourd v1 genome

Gene IDTan0011275
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:71389053..71389490
RNA-Seq ExpressionTan0011275
SyntenyTan0011275
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]4.2e-2664.1Show/hide
Query:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESY-KDYC--RCDDELITRE-ICVYDNCDEDCEEGLQDDLEKRAQEFI
        VSSKH+NF + L EII VVKSS   +FLA N I+ ILF EK KR  S+E+  ES+ KD+C    D EL + E ICV D+CDE CEEG+QDDLEK+AQEFI
Subjt:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESY-KDYC--RCDDELITRE-ICVYDNCDEDCEEGLQDDLEKRAQEFI

Query:  DMMNSFWREELVCDRFL
        DMMN+FWREEL+ DRFL
Subjt:  DMMNSFWREELVCDRFL

KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]3.2e-2659.6Show/hide
Query:  MKKLPIIFLLLLCIIIVLSFFLFFFFYFSSSSVSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYKDYCR-CDD--EL
        MKKL +IF   LCIIIVLSFFLFF        VS  H+N      EI+ VVKSS   +FLA N I+ ILFG+K K+  S+EE  E  KD C  C D  EL
Subjt:  MKKLPIIFLLLLCIIIVLSFFLFFFFYFSSSSVSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYKDYCR-CDD--EL

Query:  ITRE-ICVYDNCDED-CEEG-LQDDLEKRAQEFIDMMNSFWREELVCDRFL
         + E ICV D+CDED CEEG +QDDLEK+AQEFIDMMN+FWREEL+ DRFL
Subjt:  ITRE-ICVYDNCDED-CEEG-LQDDLEKRAQEFIDMMNSFWREELVCDRFL

KAG6593708.1 hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2475Show/hide
Query:  MFILFGEKFKRSPSEE----ERVESYKDYCRCDDELITREICVYDNCDEDCEEGLQDDLEKRAQEFIDMMNSFWREELVCDRFL
        MFILFGEKFK+SPSEE    E+VESY+DY R DDELIT  I VYD+CDED +E  QDD EK+AQEFI+MM SFWREELVCDRFL
Subjt:  MFILFGEKFKRSPSEE----ERVESYKDYCRCDDELITREICVYDNCDEDCEEGLQDDLEKRAQEFIDMMNSFWREELVCDRFL

TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein3.1e-2259.66Show/hide
Query:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYKDYCR-CDD--ELITRE-ICVYDNCDED-CEEG-LQDDLEKRAQE
        VS  H+N      EI+ VVKSS   +FLA N I+ ILFG+K K+  S+EE  E  KD C  C D  EL + E ICV D+CDED CEEG +QDDLEK+AQE
Subjt:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYKDYCR-CDD--ELITRE-ICVYDNCDED-CEEG-LQDDLEKRAQE

Query:  FIDMMNSFWREELVCDRFL
        FIDMMN+FWREEL+ DRFL
Subjt:  FIDMMNSFWREELVCDRFL

A0A5A7T9A6 Uncharacterized protein2.1e-2664.1Show/hide
Query:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESY-KDYC--RCDDELITRE-ICVYDNCDEDCEEGLQDDLEKRAQEFI
        VSSKH+NF + L EII VVKSS   +FLA N I+ ILF EK KR  S+E+  ES+ KD+C    D EL + E ICV D+CDE CEEG+QDDLEK+AQEFI
Subjt:  VSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESY-KDYC--RCDDELITRE-ICVYDNCDEDCEEGLQDDLEKRAQEFI

Query:  DMMNSFWREELVCDRFL
        DMMN+FWREEL+ DRFL
Subjt:  DMMNSFWREELVCDRFL

A0A7N2MFN6 Uncharacterized protein8.4e-0437.11Show/hide
Query:  MKKLPIIFLLLLCIIIVLSFFLFFFFYFSSSSVSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYK-DYCRCDDELIT
        MK    I  LLLC+II+L  F+F    FS S  +SK  N FL  YE I + KSS   VF  FN I+  +    FK S  + +   S+       DD+   
Subjt:  MKKLPIIFLLLLCIIIVLSFFLFFFFYFSSSSVSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYK-DYCRCDDELIT

Query:  REICVYDNCDE---DCEEGLQD----------DLEKRAQEFIDMMNSFWREELVCDRFL
         +   YD+ DE   D  EG  D          DLE R ++FI   +  WREEL+ +RFL
Subjt:  REICVYDNCDE---DCEEGLQD----------DLEKRAQEFIDMMNSFWREELVCDRFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACTTCCCATAATTTTTCTTTTGCTTCTTTGCATCATTATTGTACTAAGTTTCTTCCTCTTCTTCTTCTTCTATTTCTCATCCTCTTCGGTGAGTTCCAAGCA
TCAAAACTTCTTCCTCTACTTGTATGAAATCATTCGTGTAGTGAAATCGAGTCATACGTTGGTGTTTCTCGCATTTAACGCCATCATGTTCATCCTCTTCGGCGAGAAGT
TTAAGCGGTCACCGAGTGAAGAAGAACGGGTAGAGAGTTATAAAGATTATTGTAGATGTGACGATGAATTGATTACTCGTGAAATTTGTGTTTATGATAATTGTGATGAA
GACTGTGAAGAAGGGCTTCAAGATGATTTGGAGAAGAGGGCGCAAGAGTTTATTGACATGATGAACTCTTTTTGGAGGGAAGAATTGGTTTGTGATAGGTTTCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACTTCCCATAATTTTTCTTTTGCTTCTTTGCATCATTATTGTACTAAGTTTCTTCCTCTTCTTCTTCTTCTATTTCTCATCCTCTTCGGTGAGTTCCAAGCA
TCAAAACTTCTTCCTCTACTTGTATGAAATCATTCGTGTAGTGAAATCGAGTCATACGTTGGTGTTTCTCGCATTTAACGCCATCATGTTCATCCTCTTCGGCGAGAAGT
TTAAGCGGTCACCGAGTGAAGAAGAACGGGTAGAGAGTTATAAAGATTATTGTAGATGTGACGATGAATTGATTACTCGTGAAATTTGTGTTTATGATAATTGTGATGAA
GACTGTGAAGAAGGGCTTCAAGATGATTTGGAGAAGAGGGCGCAAGAGTTTATTGACATGATGAACTCTTTTTGGAGGGAAGAATTGGTTTGTGATAGGTTTCTATAG
Protein sequenceShow/hide protein sequence
MKKLPIIFLLLLCIIIVLSFFLFFFFYFSSSSVSSKHQNFFLYLYEIIRVVKSSHTLVFLAFNAIMFILFGEKFKRSPSEEERVESYKDYCRCDDELITREICVYDNCDE
DCEEGLQDDLEKRAQEFIDMMNSFWREELVCDRFL