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Tan0011304 (gene) of Snake gourd v1 genome

Gene IDTan0011304
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich protein 5-like
Genome locationLG06:74751932..74753103
RNA-Seq ExpressionTan0011304
SyntenyTan0011304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460740.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]7.4e-2869.23Show/hide
Query:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG
        KI+V+V FVF +++  GR VP         QTLE AA+PVA+PP RGGV +QKNIFGGVGGF GMGGYIGGLFPH+GG+G IGKYGGIGGG      GFG
Subjt:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG

Query:  GGVGGVGGVGGGVVPFP
         GVGGVGGVGGGVVPFP
Subjt:  GGVGGVGGVGGGVVPFP

XP_022964503.1 glycine-rich protein 5-like [Cucurbita moschata]1.1e-2671.9Show/hide
Query:  MAKI---IVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----
        MAKI   +VVVVFV LVVHA+GRNVP          L+LA APVA  P     V+QKNI+GGVGGFAGMGGYIGGLFPH+GG+GVIGKYGGIGGGI    
Subjt:  MAKI---IVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----

Query:  -GFGGGVGGVGGVGGGVVPFP
         GFGGGVGGVGGVGGGVVPFP
Subjt:  -GFGGGVGGVGGVGGGVVPFP

XP_023000565.1 glycine-rich protein 5-like [Cucurbita maxima]1.4e-2672.17Show/hide
Query:  IIVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFGGG
        ++VVVVFV LVVHA+GRNVP          L+LA APVA  P     V+QKNI+GGVGGFAGMGGYIGGLFPH+GG+GVIGKYGGIGGGI     GFGGG
Subjt:  IIVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFGGG

Query:  VGGVGGVGGGVVPFP
        VGGVGGVGGGVVPFP
Subjt:  VGGVGGVGGGVVPFP

XP_031736587.1 glycine-rich protein 5-like isoform X3 [Cucumis sativus]1.9e-2867.77Show/hide
Query:  MAK-IIVVVVFVFLVVHASGRNVPS---------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----
        MAK  ++++ FVFL+++  GRNVP          +TLE AAAPVA+PP RGGV +QKNIFGGVG FAGMGGYIGGLFPH+GG+GVIGKYGGIGGG     
Subjt:  MAK-IIVVVVFVFLVVHASGRNVPS---------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----

Query:  -GFGGGVGGVGGVGGGVVPFP
         GFGGGVGGVGG+GGG+VPFP
Subjt:  -GFGGGVGGVGGVGGGVVPFP

XP_038906734.1 glycine-rich protein 5-like [Benincasa hispida]7.1e-3177.31Show/hide
Query:  MAKI-IVVVVFVFLVVHASGRNVPS-------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----G
        MAKI IVVV FVFL V+A GRNVP+       QTLE AAAPVADPP   GV +QKNIFGGVGGFAGMGGYIGGLFPH+GG+GVIGKYGGIGGGI     G
Subjt:  MAKI-IVVVVFVFLVVHASGRNVPS-------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----G

Query:  FGGGVGGVGGVGGGVVPFP
        FGGGVGGVGGVGGG VPFP
Subjt:  FGGGVGGVGGVGGGVVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like3.6e-2869.23Show/hide
Query:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG
        KI+V+V FVF +++  GR VP         QTLE AA+PVA+PP RGGV +QKNIFGGVGGF GMGGYIGGLFPH+GG+G IGKYGGIGGG      GFG
Subjt:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG

Query:  GGVGGVGGVGGGVVPFP
         GVGGVGGVGGGVVPFP
Subjt:  GGVGGVGGVGGGVVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like3.6e-2869.23Show/hide
Query:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG
        KI+V+V FVF +++  GR VP         QTLE AA+PVA+PP RGGV +QKNIFGGVGGF GMGGYIGGLFPH+GG+G IGKYGGIGGG      GFG
Subjt:  KIIVVVVFVFLVVHASGRNVPS--------QTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFG

Query:  GGVGGVGGVGGGVVPFP
         GVGGVGGVGGGVVPFP
Subjt:  GGVGGVGGVGGGVVPFP

A0A6J1CDU6 WW domain-containing protein C660.062.7e-2067.24Show/hide
Query:  MAKIIVVVV---FVFLVVHASGRNVP--------SQTLELAAAPVADPPGRGGVVNQKN-IFGGVGGFAGMGGYIGGLFPHI--GGIGVIGKYGGIGGGI
        M KI V VV   FV LVVHASGR+VP         QTLELA  PVADPP  GGV  QK  IFGGVGGFAGMGG++GGLFPH+  GG+G IGK+GGIGGG 
Subjt:  MAKIIVVVV---FVFLVVHASGRNVP--------SQTLELAAAPVADPPGRGGVVNQKN-IFGGVGGFAGMGGYIGGLFPHI--GGIGVIGKYGGIGGGI

Query:  G-FGGGVGGVGGVGGG
        G   GGVGG+GGVGGG
Subjt:  G-FGGGVGGVGGVGGG

A0A6J1HL05 glycine-rich protein 5-like5.2e-2771.9Show/hide
Query:  MAKI---IVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----
        MAKI   +VVVVFV LVVHA+GRNVP          L+LA APVA  P     V+QKNI+GGVGGFAGMGGYIGGLFPH+GG+GVIGKYGGIGGGI    
Subjt:  MAKI---IVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI----

Query:  -GFGGGVGGVGGVGGGVVPFP
         GFGGGVGGVGGVGGGVVPFP
Subjt:  -GFGGGVGGVGGVGGGVVPFP

A0A6J1KIQ3 glycine-rich protein 5-like6.7e-2772.17Show/hide
Query:  IIVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFGGG
        ++VVVVFV LVVHA+GRNVP          L+LA APVA  P     V+QKNI+GGVGGFAGMGGYIGGLFPH+GG+GVIGKYGGIGGGI     GFGGG
Subjt:  IIVVVVFVFLVVHASGRNVP-------SQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGI-----GFGGG

Query:  VGGVGGVGGGVVPFP
        VGGVGGVGGGVVPFP
Subjt:  VGGVGGVGGGVVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein5.5e-0545.83Show/hide
Query:  IVVVVFVFLVVHASGRNVPSQTLELAA------------APVADPPGRGGVVNQKNIFG--GVGGFAGMGGY--IGGL-FPHIGGIGVIGKYGGIGGGIG
        +V V+     V A  R VP ++ E               A  AD      V ++K I G  GVGGFAG+GG   +GGL  P IGG+G IGKYGGIGG  G
Subjt:  IVVVVFVFLVVHASGRNVPSQTLELAA------------APVADPPGRGGVVNQKNIFG--GVGGFAGMGGY--IGGL-FPHIGGIGVIGKYGGIGGGIG

Query:  FG-----GGVGGVGGVGGGV
         G     GGVGG+GGVGGGV
Subjt:  FG-----GGVGGVGGVGGGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGATTATCGTCGTTGTCGTATTTGTTTTTCTGGTTGTGCACGCGAGCGGGCGCAACGTTCCAAGCCAAACCCTAGAACTTGCAGCGGCACCGGTGGCGGATCC
ACCGGGCCGCGGCGGCGTTGTCAATCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGTTATATTGGAGGATTGTTTCCACATATTGGTGGGATTG
GTGTAATCGGCAAGTACGGCGGAATTGGTGGTGGGATTGGCTTCGGAGGCGGAGTTGGCGGCGTCGGCGGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGATTATCGTCGTTGTCGTATTTGTTTTTCTGGTTGTGCACGCGAGCGGGCGCAACGTTCCAAGCCAAACCCTAGAACTTGCAGCGGCACCGGTGGCGGATCC
ACCGGGCCGCGGCGGCGTTGTCAATCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGTTATATTGGAGGATTGTTTCCACATATTGGTGGGATTG
GTGTAATCGGCAAGTACGGCGGAATTGGTGGTGGGATTGGCTTCGGAGGCGGAGTTGGCGGCGTCGGCGGCGTAGGTGGTGGAGTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
MAKIIVVVVFVFLVVHASGRNVPSQTLELAAAPVADPPGRGGVVNQKNIFGGVGGFAGMGGYIGGLFPHIGGIGVIGKYGGIGGGIGFGGGVGGVGGVGGGVVPFP