CuGenDBv2

Gene ID	Tan0011311
Organism	Trichosanthes anguina (Snake gourd v1)
Description	serine/arginine-rich splicing factor 11
Genome location	LG09:7847502..7850327
RNA-Seq Expression	Tan0011311
Synteny	Tan0011311
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

4.0e-62

80.77

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSS+ TS +SDSSSSS RRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDR+KKDK
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

1.4e-67

84.62

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSATS+TSDSSSSS RRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR+KKDK
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

XP_022970036.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita maxima]

1.7e-60

81.73

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  K
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

XP_023531665.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita pepo subsp. pepo]

1.7e-60

81.73

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  K
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

4.3e-64

81.73

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSATSYTSDSSSSS RRRRRRR RREKDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSESDYSR++SSSQSEPETSGRSKRHK+NDR+K+DK
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

2.0e-62

80.77

Show/hide

Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSS+ TS +SDSSSSS RRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDR+KKDK
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

6.9e-68

84.62

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSATS+TSDSSSSS RRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR+KKDK
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

A0A6J1EV15 serine/arginine-rich splicing factor 11 isoform X1

3.1e-60

81.25

Show/hide

Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDR+ALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  K
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

8.2e-61

81.73

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Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  K
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

3.1e-60

81.25

Show/hide

Query:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK
        MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +KK  
Subjt:  MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDK

Query:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL
         RERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         ILLKLDKSKEDKAEENKRNELL
Subjt:  ERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELL

Query:  KFLNSSFD
        KFLNSSFD
Subjt:  KFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

2.7e-32

55.24

Show/hide

Query:  MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKK
        MAASSSS++S  S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+RHKK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKK

Query:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNE
         K++ERSKSH HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKK                         ILLK+DKSKEDKA E+KRNE
Subjt:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNE

Query:  LLKFLNSSFD
        LLKFLN+SFD
Subjt:  LLKFLNSSFD

AT5G27860.2 unknown protein

2.7e-32

55.24

Show/hide

Query:  MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKK
        MAASSSS++S  S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+RHKK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKK

Query:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNE
         K++ERSKSH HKR K++ ++K   E SS PV+LSKFL R+KDDG RRSAVSGKK                         ILLK+DKSKEDKA E+KRNE
Subjt:  DKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNE

Query:  LLKFLNSSFD
        LLKFLN+SFD
Subjt:  LLKFLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCATCTTCTTCTTGTCGCCGTCGCCGACGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCACT
TAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGATTACTCCCGAAGCG
ATAGCTCCTCTCAAAGCGAGCCCGAAACATCAGGTCGTTCAAAGCGGCATAAGAAGAATGATAGATCGAAGAAGGATAAGGAGAGGGAGCGAAGTAAGAGTCATCACCAT
AAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTGCTCGGCGGAG
TGCTGTCTCTGGAAAAAAGGTTAAAGATCCACCTCTTGTTTTTGCACATGTTTGGAAATGCTTTTTTCACTATGTTTTTTTTTTTTTTTTTTTGATATTGTTGAAACTTG
ATAAATCAAAGGAAGACAAAGCTGAAGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

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Protein sequence

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MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHH
KRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELLKFLNSSFD

Tan0011311 (gene) of Snake gourd v1 genome