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Tan0011321 (gene) of Snake gourd v1 genome

Gene IDTan0011321
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG09:30287170..30287412
RNA-Seq ExpressionTan0011321
SyntenyTan0011321
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2475Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2475Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2475Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2475Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-2475Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein6.2e-2575Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
A0A5A7TU93 Gag/pol protein6.2e-2575Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
A0A5A7TWB9 Gag/pol protein6.2e-2575Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
A0A5A7V4M1 Gag/pol protein6.2e-2575Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
A0A5D3CPJ6 Gag/pol protein6.2e-2575Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  I +DALKY+YN+RM +G SVR HVLNMMVHFNVAE+NGAVIDE SQ+SFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAAGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGATTTGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
CGGAACATCTGTTAGGGCGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACGGGGCTGTCATTGATGAGAACAGTCAGATTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAAGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGATTTGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
CGGAACATCTGTTAGGGCGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACGGGGCTGTCATTGATGAGAACAGTCAGATTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTGTAG
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSICYDALKYVYNSRMKDGTSVRAHVLNMMVHFNVAEVNGAVIDENSQISFIMESLPKSFL