; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011334 (gene) of Snake gourd v1 genome

Gene IDTan0011334
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-directed RNA polymerase III subunit rpc6-like
Genome locationLG10:4359908..4361799
RNA-Seq ExpressionTan0011334
SyntenyTan0011334
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]2.8e-10478.1Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+        GALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK CS+GG+K
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK

Query:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        GEP+TGAMASIPC VCPRI++CTPNG++SP TCVYYTKWLDF
Subjt:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]1.7e-10478.6Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+       GGALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK C++ GG+
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV

Query:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        KGEP+ GAMASIPC VCPRI+YCTPNG++SP TCVYYTKWLDF
Subjt:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]2.8e-10478.1Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+        GALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK CS+GG+K
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK

Query:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        GEP+TGAMASIPC VCPRI++CTPNG++SP TCVYYTKWLDF
Subjt:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]1.7e-10478.6Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+       GGALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK C++ GG+
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV

Query:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        KGEP+ GAMASIPC VCPRI+YCTPNG++SP TCVYYTKWLDF
Subjt:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

XP_022149571.1 DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia]3.0e-10680.67Show/hide
Query:  MSKSQGPSSLKRKRPE--GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGD
        MS+SQGPSSLKRKRP+   GGALIEHEK LYDLI SKQS GI   D+KRET +A++ VTKSLKALQAKG+IK+V+HYQNKGKKFY+SKDFEPSKELTGG+
Subjt:  MSKSQGPSSLKRKRPE--GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGD

Query:  WYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPR
        WY +G LD EYINTLKG C RMIQK K+ TIEGIV+SFKKSGASKV+LS+EQIQEIVNALVLD+EVMEVKS G+GEFDF+P+GKICYKC +KGGVKGEP+
Subjt:  WYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPR

Query:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        TGAMASIPC VCPRIS+CTPNGV+SP+TCVYYTKWLDF
Subjt:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like8.0e-10578.6Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+       GGALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK C++ GG+
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV

Query:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        KGEP+ GAMASIPC VCPRI+YCTPNG++SP TCVYYTKWLDF
Subjt:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

A0A5A7UBI4 DNA-directed RNA polymerase III subunit RPC6-like1.4e-10478.1Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+        GALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK CS+GG+K
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK

Query:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        GEP+TGAMASIPC VCPRI++CTPNG++SP TCVYYTKWLDF
Subjt:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like1.4e-10478.1Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+        GALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK CS+GG+K
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVK

Query:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        GEP+TGAMASIPC VCPRI++CTPNG++SP TCVYYTKWLDF
Subjt:  GEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like8.0e-10578.6Show/hide
Query:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL
        MSKSQGPSSLKRKRP+       GGALI  EK LYDLI SKQS GICTFDMKRET FAE+ VTKSLK+LQ KGLIK+VQHYQNKGKKFY+S DFEP+KEL
Subjt:  MSKSQGPSSLKRKRPE------GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKEL

Query:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV
        TGG+WYRDG LD +YINTLK VCARMIQ+KKL+TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK C++ GG+
Subjt:  TGGDWYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSK-GGV

Query:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        KGEP+ GAMASIPC VCPRI+YCTPNG++SP TCVYYTKWLDF
Subjt:  KGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

A0A6J1D8D1 DNA-directed RNA polymerase III subunit rpc6 isoform X11.5e-10680.67Show/hide
Query:  MSKSQGPSSLKRKRPE--GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGD
        MS+SQGPSSLKRKRP+   GGALIEHEK LYDLI SKQS GI   D+KRET +A++ VTKSLKALQAKG+IK+V+HYQNKGKKFY+SKDFEPSKELTGG+
Subjt:  MSKSQGPSSLKRKRPE--GGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGD

Query:  WYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPR
        WY +G LD EYINTLKG C RMIQK K+ TIEGIV+SFKKSGASKV+LS+EQIQEIVNALVLD+EVMEVKS G+GEFDF+P+GKICYKC +KGGVKGEP+
Subjt:  WYRDGILDTEYINTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPR

Query:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        TGAMASIPC VCPRIS+CTPNGV+SP+TCVYYTKWLDF
Subjt:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

SwissProt top hitse value%identityAlignment
Q2T9S3 DNA-directed RNA polymerase III subunit RPC67.4e-2331.74Show/hide
Query:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK
        EK +Y +I    + GI + D++ ++N   T + K LK L++K LIK V+      KK YM  + +P + +TGG WY D   ++E++  L   C + +Q K
Subjt:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK

Query:  KLVTIEGIV-------ESFKKS----------GASKVELSKEQIQEIVNALVLDHEV-MEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMASIP
             E           SF  S          G SKVELS E I+ I+N L+ D +V M + +   G    +      Y+  S       P TG +   P
Subjt:  KLVTIEGIV-------ESFKKS----------GASKVELSKEQIQEIVNALVLDHEV-MEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMASIP

Query:  CAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        C +CP    C   G +SP  C+Y T+WL+F
Subjt:  CAVCPRISYCTPNGVVSPKTCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc62.3e-2431.9Show/hide
Query:  LYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKKKLV
        +Y LI +  + G  T ++K  + + +  +TK LK L+++ LIK V+  Q+  KK YM  + EPS+E+TGG  Y D   D +YI  +K      +  K  V
Subjt:  LYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKKKLV

Query:  TIEGIVESFKK--SGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMASIPCAVCPRISYCTPNGVVSPK
         +  I+   +K    A+   L  E IQ +VN ++ D ++ E++    G       G I YK       K         ++PC  CP    C+ NG+VSPK
Subjt:  TIEGIVESFKK--SGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMASIPCAVCPRISYCTPNGVVSPK

Query:  TCVYYTKWLD
         CVY+ ++L+
Subjt:  TCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC65.7e-2331.09Show/hide
Query:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK
        EK +Y +I    + GI + D++ ++N   T + K LK L++K LIK V+      KK YM  + +P + +TGG WY D   ++E++  L   C + +Q K
Subjt:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK

Query:  KLVTIEG----IVE---SFKKS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKCCSKGGVKGEPR
             E     +++   SF  S          G SKVELS E I+ I+N L+ D +V    +  K    G  D     +  V  I             P 
Subjt:  KLVTIEG----IVE---SFKKS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKCCSKGGVKGEPR

Query:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        TG + + PC +CP    C   G +SP  C+Y T+WL+F
Subjt:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC61.3e-2231.09Show/hide
Query:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK
        EK +Y +I    + GI + D++ ++N   T + K LK L++K LIK V+      KK YM  + +P + +TGG WY D   ++E++  L   C + +Q K
Subjt:  EKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYINTLKGVCARMIQKK

Query:  KLVTIEGIV-------ESFKKS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKCCSKGGVKGEPR
             E           SF  S          G SKVELS E I+ I+N L+ D +V    +  K    G  D     +  V  I             P 
Subjt:  KLVTIEGIV-------ESFKKS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKCCSKGGVKGEPR

Query:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        TG +   PC +CP    C   G +SP  C+Y T+WL+F
Subjt:  TGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF

Q9VD25 Probable DNA-directed RNA polymerase III subunit RPC63.8e-1928.05Show/hide
Query:  KRKRPEGGGALIE----HEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILD
        + K PE   AL +     EK +Y ++    + GI   D++ ++N     + K LK L+ K LIK V+      KK YM  + EP   +TGG WY+D   +
Subjt:  KRKRPEGGGALIE----HEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILD

Query:  TEYINTLKGVCARMIQKKK-----------------LVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCS
         E+++ L   C R +Q K+                   T+  + +     G SKV L++  ++ I+  +V D     V+    G F +  V         
Subjt:  TEYINTLKGVCARMIQKKK-----------------LVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCS

Query:  KGGVKGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLD
               P TG +  +PC +CP I  C+  G V+  TC Y   WLD
Subjt:  KGGVKGEPRTGAMASIPCAVCPRISYCTPNGVVSPKTCVYYTKWLD

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases9.9e-5547.84Show/hide
Query:  KRKRPE---GGGALIE-HEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILD
        KRKRP+    GG L E HEK+L DLIR  Q  G   F++KRE     T VT+ + +L+ K LIK V +  NKG K Y++ +FEP  ELTGG+WY DG LD
Subjt:  KRKRPE---GGGALIE-HEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILD

Query:  TEYINTLKGVCARMIQ--KKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMAS
           I  LK  C  +++  ++++VT+E +   F K    + +LS +Q +EI+  L+LD+ +MEVKSNG  EF    +G++CY+   K    GEPR GA AS
Subjt:  TEYINTLKGVCARMIQ--KKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMAS

Query:  IPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF
        IPC VCP I+ C+P+GV+SP TCVY+ KWLDF
Subjt:  IPCAVCPRISYCTPNGVVSPKTCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAATCACAAGGCCCTTCATCACTGAAAAGAAAAAGGCCAGAAGGAGGAGGAGCTCTAATTGAGCATGAAAAACAGCTCTATGACCTGATTCGCAGCAAGCAAAG
CGCCGGAATTTGCACATTCGACATGAAAAGAGAAACAAATTTTGCTGAAACTACAGTAACTAAATCACTCAAGGCCCTTCAAGCCAAAGGCCTGATAAAAGTGGTTCAAC
ACTATCAGAACAAAGGGAAGAAATTCTACATGTCGAAAGATTTCGAACCATCGAAAGAACTAACCGGAGGAGATTGGTACCGGGACGGGATACTCGACACCGAATATATC
AACACTCTTAAAGGAGTTTGTGCAAGAATGATACAGAAGAAGAAGCTGGTCACCATTGAAGGGATTGTGGAGTCTTTCAAGAAGAGTGGAGCTTCTAAAGTGGAGTTGTC
TAAGGAACAAATTCAAGAGATTGTAAATGCTTTGGTGTTGGATCATGAAGTAATGGAAGTGAAGAGCAATGGAACTGGAGAATTTGATTTTATGCCTGTTGGGAAGATAT
GTTATAAGTGTTGTTCTAAAGGAGGTGTTAAAGGGGAGCCTAGAACAGGGGCAATGGCTTCTATTCCTTGTGCAGTTTGTCCAAGGATTAGTTATTGTACACCAAACGGC
GTCGTTTCGCCGAAGACTTGTGTGTATTACACCAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
TAATTATTACATTGGTTTATATTGTTGATTGATTTTTATTTGTATTTTTTTTTATTGAAAACTTTCTTTAAAATTGTTCTGTTTTTATTTGTTTTAGTTGTTTAGGTAAA
TTATTATATTGTTTTATCGTAATGTTTATGCTGAAATATTTGCCAAATTTAGACATTTATATAAAATTGAGTTTCAAAGTTAACCCTATCCTACGGCCCATCCTAAAAAG
CCCATTCCCCTTTCTTTCATTAATGGCAGTTAGCAGAAAATCAAAAAGAATTCCTTAACCTTCTCCTAGTTCTCTCTCACGCTCATCCCTCTCTAGCGCCGCCGTCGCCG
TCGCCCCTCCACCGTCCTCCTCTCGCCGCCGCCTTCCTCTGACAAGAAGAAAATGAGCAAATCACAAGGCCCTTCATCACTGAAAAGAAAAAGGCCAGAAGGAGGAGGAG
CTCTAATTGAGCATGAAAAACAGCTCTATGACCTGATTCGCAGCAAGCAAAGCGCCGGAATTTGCACATTCGACATGAAAAGAGAAACAAATTTTGCTGAAACTACAGTA
ACTAAATCACTCAAGGCCCTTCAAGCCAAAGGCCTGATAAAAGTGGTTCAACACTATCAGAACAAAGGGAAGAAATTCTACATGTCGAAAGATTTCGAACCATCGAAAGA
ACTAACCGGAGGAGATTGGTACCGGGACGGGATACTCGACACCGAATATATCAACACTCTTAAAGGAGTTTGTGCAAGAATGATACAGAAGAAGAAGCTGGTCACCATTG
AAGGGATTGTGGAGTCTTTCAAGAAGAGTGGAGCTTCTAAAGTGGAGTTGTCTAAGGAACAAATTCAAGAGATTGTAAATGCTTTGGTGTTGGATCATGAAGTAATGGAA
GTGAAGAGCAATGGAACTGGAGAATTTGATTTTATGCCTGTTGGGAAGATATGTTATAAGTGTTGTTCTAAAGGAGGTGTTAAAGGGGAGCCTAGAACAGGGGCAATGGC
TTCTATTCCTTGTGCAGTTTGTCCAAGGATTAGTTATTGTACACCAAACGGCGTCGTTTCGCCGAAGACTTGTGTGTATTACACCAAGTGGTTAGATTTTTAATTTGCTT
TTTATACAATATTTAGAGATTTTTATTTTTTACATTAACCATATGTAAAGATAGAGATTCAAATCTATGACTTTTGTTAACATGAGCTGCAAATCTTGTTACCAACTGAG
CAATACCTTGATTTTTAAGTGGAAGCTTTTTTATAATAGTTTTTTTTTTTTAGTAAAATAAATTCAGGGAAATGTCTAATTATTT
Protein sequenceShow/hide protein sequence
MSKSQGPSSLKRKRPEGGGALIEHEKQLYDLIRSKQSAGICTFDMKRETNFAETTVTKSLKALQAKGLIKVVQHYQNKGKKFYMSKDFEPSKELTGGDWYRDGILDTEYI
NTLKGVCARMIQKKKLVTIEGIVESFKKSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKCCSKGGVKGEPRTGAMASIPCAVCPRISYCTPNG
VVSPKTCVYYTKWLDF