; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011361 (gene) of Snake gourd v1 genome

Gene IDTan0011361
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor UPBEAT1
Genome locationLG06:5494204..5494738
RNA-Seq ExpressionTan0011361
SyntenyTan0011361
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]3.5e-2354.97Show/hide
Query:  MGVFPETLLLVQLNMKE--TTQE---TITKHRSNPQN-ESIFKQTSM-----EQQQQEAINKAKPKS------LNRIRRRRSSSNSLLMKNRRSR-----
        MGV  ETLL +QLNM++  TTQ+    I + R++  N +SI+K+ SM     E++ QE  +K K KS        R  RRRS SNSL++K R  R     
Subjt:  MGVFPETLLLVQLNMKE--TTQE---TITKHRSNPQN-ESIFKQTSM-----EQQQQEAINKAKPKS------LNRIRRRRSSSNSLLMKNRRSR-----

Query:  SSTTRIQQRVNTLRNLVPNMNNNNNNEDS--VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND
        SST+RI+QRVN LRNLVPN +N+ ++++S   GSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS D
Subjt:  SSTTRIQQRVNTLRNLVPNMNNNNNNEDS--VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2761.11Show/hide
Query:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN
        MG FP TLLL+QLNM+E TQ+ I        N SI K++SME++Q         K+    RRRR +S SL  K RR   S+TRI QRV TLRNLVPNMNN
Subjt:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN

Query:  NNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSS
        +N+N+++ GSLEQLFT TADYILSLQTRVR M TLVDVLSGSSS
Subjt:  NNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSS

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]7.7e-3166.67Show/hide
Query:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN
        MGV+PETLLLVQLNMKE +Q+  +      Q E        +Q+QQEAI K+         RRR SSNS LMK RRSRSS TRI+QRV+TLRNLVPNMNN
Subjt:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN

Query:  NNNNEDS-VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSNDHE
        NNNN +S VGSLEQLFTQTADYILSLQTRVR M  LVDVL  S+SSNDHE
Subjt:  NNNNEDS-VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSNDHE

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-3168.67Show/hide
Query:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN
        MGV+PETLLLVQLNMKE +Q+                +TSME+QQQE   +A  KS N   RRR SSNS LMK RRSRSS TRI+QRV+TLRNLVPNMNN
Subjt:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNN

Query:  NNNNEDS-VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSNDHE
        NNNN +S VGSLEQLFTQTADYILSLQTRVR M  LVDVL  S+SSNDHE
Subjt:  NNNNEDS-VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSNDHE

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]2.0e-2354.22Show/hide
Query:  MGVFPETLLLVQLNMK--ETTQETITK----HRSNPQNESIFKQTSMEQQQQEAIN-KAKPK------SLNRIRRRRSSSNSLLMKNRRSR---SSTTRI
        MGV  ETLL +QLNM+  +TTQ+ I        +N  ++S +K+ SM++++ + IN K K        +  R  RRRS SNSL++K R  R   SS++RI
Subjt:  MGVFPETLLLVQLNMK--ETTQETITK----HRSNPQNESIFKQTSMEQQQQEAIN-KAKPK------SLNRIRRRRSSSNSLLMKNRRSR---SSTTRI

Query:  QQRVNTLRNLVPNMNNNNN---NEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND
        +QRVNTLR+LVPN +N+N+   +E  VGSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS D
Subjt:  QQRVNTLRNLVPNMNNNNN---NEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein9.8e-2454.22Show/hide
Query:  MGVFPETLLLVQLNMK--ETTQETITK----HRSNPQNESIFKQTSMEQQQQEAIN-KAKPK------SLNRIRRRRSSSNSLLMKNRRSR---SSTTRI
        MGV  ETLL +QLNM+  +TTQ+ I        +N  ++S +K+ SM++++ + IN K K        +  R  RRRS SNSL++K R  R   SS++RI
Subjt:  MGVFPETLLLVQLNMK--ETTQETITK----HRSNPQNESIFKQTSMEQQQQEAIN-KAKPK------SLNRIRRRRSSSNSLLMKNRRSR---SSTTRI

Query:  QQRVNTLRNLVPNMNNNNN---NEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND
        +QRVNTLR+LVPN +N+N+   +E  VGSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS D
Subjt:  QQRVNTLRNLVPNMNNNNN---NEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND

A0A444XT61 Uncharacterized protein7.8e-0545.26Show/hide
Query:  RRRRSSSNSLLMK----NRRSRSSTTR----IQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND
        RR R+ +  +LMK    +RRSR   T+    IQ RV TL+NL+PN +NN         L+ LF +TA+YILSLQ RVR+M  +V VL+GS   ++
Subjt:  RRRRSSSNSLLMK----NRRSRSSTTR----IQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND

A0A445F6P8 Transcription factor UPBEAT14.6e-0541.38Show/hide
Query:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRS---RSSTTRIQQRVNTLRNLVPN
        MG+  +T  LV  ++K+  Q T      N  + S     S     Q    K   +S+ R RR       +LM NRRS   R S   I++RV TL++LVP 
Subjt:  MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRS---RSSTTRIQQRVNTLRNLVPN

Query:  MNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGS
              N DS+G L+ LF QTADYILSLQTRVR+M  +V VL+GS
Subjt:  MNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGS

A0A5A7TXU1 Transcription factor UPBEAT11.7e-2354.97Show/hide
Query:  MGVFPETLLLVQLNMKE--TTQE---TITKHRSNPQN-ESIFKQTSM-----EQQQQEAINKAKPKS------LNRIRRRRSSSNSLLMKNRRSR-----
        MGV  ETLL +QLNM++  TTQ+    I + R++  N +SI+K+ SM     E++ QE  +K K KS        R  RRRS SNSL++K R  R     
Subjt:  MGVFPETLLLVQLNMKE--TTQE---TITKHRSNPQN-ESIFKQTSM-----EQQQQEAINKAKPKS------LNRIRRRRSSSNSLLMKNRRSR-----

Query:  SSTTRIQQRVNTLRNLVPNMNNNNNNEDS--VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND
        SST+RI+QRVN LRNLVPN +N+ ++++S   GSLEQLFTQTADYILSLQTRVRLM TLVDVLS  SSS D
Subjt:  SSTTRIQQRVNTLRNLVPNMNNNNNNEDS--VGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSND

I1NHA0 BHLH transcription factor9.2e-0648.94Show/hide
Query:  AKPKSLNRIRRRRSSSNSLLMKNRRS---RSSTTRIQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGS
        A+ K +   +R       +LM NRRS   R S   I++RV TL++LVP       N DS+G L+ LF QTADYILSLQTRVR+M  +V VL+GS
Subjt:  AKPKSLNRIRRRRSSSNSLLMKNRRS---RSSTTRIQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTLVDVLSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators5.0e-0435.24Show/hide
Query:  SMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTR----IQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTL
        ++E Q++E+I       + R R RR+    ++++ R+S  ++ R    I +RV TL+ LVPN   +         L+ LF QTADYIL+L+ +V++M T+
Subjt:  SMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTR----IQQRVNTLRNLVPNMNNNNNNEDSVGSLEQLFTQTADYILSLQTRVRLMNTL

Query:  VDVLS
        V VL+
Subjt:  VDVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCCCAGAAACCCTTTTGCTAGTTCAACTCAACATGAAAGAAACAACTCAAGAAACCATAACCAAACACAGAAGCAACCCACAAAATGAATCCATATTCAA
ACAAACATCAATGGAACAACAACAACAAGAAGCCATTAACAAAGCCAAACCCAAGAGTTTGAACAGAATTAGAAGAAGAAGAAGCAGCAGCAACTCATTATTGATGAAGA
ATAGAAGATCAAGATCATCAACAACAAGAATCCAGCAAAGAGTCAACACATTGAGAAACCTCGTACCAAACATGAACAACAACAACAATAATGAAGACTCTGTCGGATCA
TTAGAACAGCTTTTCACTCAAACAGCTGATTACATATTGTCGTTGCAAACAAGAGTCAGATTGATGAACACTTTGGTTGATGTCTTGTCTGGTTCTTCTTCTTCTAATGA
TCACGAGTGA
mRNA sequenceShow/hide mRNA sequence
CCCAAATAATCCCAATTTCCAATTGATCCCAAAGCCCCATCTTCTTCTCTATCTCTCACCACAAAGAGAAAAGAAAACAAAACCAATGGGAGTTTTCCCAGAAACCCTTT
TGCTAGTTCAACTCAACATGAAAGAAACAACTCAAGAAACCATAACCAAACACAGAAGCAACCCACAAAATGAATCCATATTCAAACAAACATCAATGGAACAACAACAA
CAAGAAGCCATTAACAAAGCCAAACCCAAGAGTTTGAACAGAATTAGAAGAAGAAGAAGCAGCAGCAACTCATTATTGATGAAGAATAGAAGATCAAGATCATCAACAAC
AAGAATCCAGCAAAGAGTCAACACATTGAGAAACCTCGTACCAAACATGAACAACAACAACAATAATGAAGACTCTGTCGGATCATTAGAACAGCTTTTCACTCAAACAG
CTGATTACATATTGTCGTTGCAAACAAGAGTCAGATTGATGAACACTTTGGTTGATGTCTTGTCTGGTTCTTCTTCTTCTAATGATCACGAGTGA
Protein sequenceShow/hide protein sequence
MGVFPETLLLVQLNMKETTQETITKHRSNPQNESIFKQTSMEQQQQEAINKAKPKSLNRIRRRRSSSNSLLMKNRRSRSSTTRIQQRVNTLRNLVPNMNNNNNNEDSVGS
LEQLFTQTADYILSLQTRVRLMNTLVDVLSGSSSSNDHE