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Tan0011384 (gene) of Snake gourd v1 genome

Gene IDTan0011384
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:9684259..9684633
RNA-Seq ExpressionTan0011384
SyntenyTan0011384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]5.1e-0442.34Show/hide
Query:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDAS-----------SDHQVGILSPTPASLAP-
        +  R IKKPPLP       +R PP +K  E EP II+V+    + + FK IVQLLTG  +R  P++  +              DH  GILSP P SL P 
Subjt:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDAS-----------SDHQVGILSPTPASLAP-

Query:  VSPNSFAPPPS
        VSP  F P PS
Subjt:  VSPNSFAPPPS
XP_038885909.1 extensin-like [Benincasa hispida]7.1e-0646.02Show/hide
Query:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDASSDHQ--------VGILSPTPASL-APVSP
        +  RKIKKPP PP+ AK A   P  + R E EP II VE    +   FK IVQLLTG  +R  P  +   S+DH          GILSPTP SL   V P
Subjt:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDASSDHQ--------VGILSPTPASL-APVSP

Query:  NSFAPPPSLPVPV
        ++F P PS P P+
Subjt:  NSFAPPPSLPVPV
TrEMBL top hitse value%identityAlignment
A0A5A7UXK4 Uncharacterized protein2.5e-0442.34Show/hide
Query:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDAS-----------SDHQVGILSPTPASLAP-
        +  R IKKPPLP       +R PP +K  E EP II+V+    + + FK IVQLLTG  +R  P++  +              DH  GILSP P SL P 
Subjt:  SRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDAS-----------SDHQVGILSPTPASLAP-

Query:  VSPNSFAPPPS
        VSP  F P PS
Subjt:  VSPNSFAPPPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTCAGAGTCTCGAAAGCGAAAGATCAAGAAGCCGCCACTCCCGCCGAGGGCTGCCAAATTTGCCCGCCGGCCGCCGCCGGAGATGAAAAGGTGCGAGGAGGA
GCCGATGATAATTGACGTGGAAGAAGAAGACGTCTCACAGTCACAATTCAAGGACATTGTTCAACTCCTCACCGGCAGCCGCCACCGCCAACTTCCCCTTTTCTTCTCCG
ACGCTTCTTCCGATCATCAGGTGGGAATATTGTCGCCGACCCCCGCTTCTCTGGCGCCGGTTTCTCCAAATTCTTTCGCTCCGCCGCCGTCCCTGCCGGTGCCGGTTTCG
AAAGAAGAACTCATTCCATCTCATGATATGAGGCTTATAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTCAGAGTCTCGAAAGCGAAAGATCAAGAAGCCGCCACTCCCGCCGAGGGCTGCCAAATTTGCCCGCCGGCCGCCGCCGGAGATGAAAAGGTGCGAGGAGGA
GCCGATGATAATTGACGTGGAAGAAGAAGACGTCTCACAGTCACAATTCAAGGACATTGTTCAACTCCTCACCGGCAGCCGCCACCGCCAACTTCCCCTTTTCTTCTCCG
ACGCTTCTTCCGATCATCAGGTGGGAATATTGTCGCCGACCCCCGCTTCTCTGGCGCCGGTTTCTCCAAATTCTTTCGCTCCGCCGCCGTCCCTGCCGGTGCCGGTTTCG
AAAGAAGAACTCATTCCATCTCATGATATGAGGCTTATAACTTAA
Protein sequenceShow/hide protein sequence
MGCSESRKRKIKKPPLPPRAAKFARRPPPEMKRCEEEPMIIDVEEEDVSQSQFKDIVQLLTGSRHRQLPLFFSDASSDHQVGILSPTPASLAPVSPNSFAPPPSLPVPVS
KEELIPSHDMRLIT