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Tan0011393 (gene) of Snake gourd v1 genome

Gene IDTan0011393
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationLG03:72374679..72375090
RNA-Seq ExpressionTan0011393
SyntenyTan0011393
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647513.1 hypothetical protein Csa_002853 [Cucumis sativus]4.0e-3488.75Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++SLILSSF LQ+ATADSSTTY PRVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

KAG6595002.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3490Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S+SLV+VSL+LSSFLLQHA ADSS TY PRVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

KAG7026958.1 Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-3175.53Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S+SLV+VSL+LSSFLLQHA ADSS TY P               VKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TYK12845.1 peamaclein-like [Cucumis melo var. makuwa]4.4e-3386.25Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++S ILSSF LQ+ TADSSTTY PRVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742787.1 peamaclein-like isoform X1 [Cucumis sativus]9.2e-3173.68Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR---------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++SLILSSF LQ+ATADSSTTY P+               VKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR---------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein4.4e-3173.68Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR---------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++SLILSSF LQ+ATADSSTTY P+               VKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR---------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like8.4e-3072.34Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++S ILSSF LQ+ TADSSTTY P               VKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5D3CMS1 Peamaclein-like2.1e-3386.25Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV++S ILSSF LQ+ TADSSTTY PRVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like1.3e-3074.47Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S+SLV+VSL+LSSFLLQHA ADS  TY P               VKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like7.6e-3175.53Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S+SLV+VSLILSSFLL HA ADSS TYVP               VKDRC+KYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPR--------------VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 83.5e-1750.57Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVK-------DRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   +   ++SL+L+S     ++ADSS      V+       + CLKYC ICCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVK-------DRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 75.4e-1880.43Show/hide
Query:  VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCGICC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein4.6e-1777.78Show/hide
Query:  KDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++RCLKYCGICC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  KDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 103.2e-1852.81Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  ++ ++++SL+++S L   +TADSS               +DRCLKYC ICC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-14.0e-2156.82Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   ++L++V+L+++  L+Q   A SS              + DRCLKYCGICC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein9.5e-1850Show/hide
Query:  ISLVVVSLILSSFLLQHATADSST---------TYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +   ++SL+L+S     ++ADSS          +   R  + CL+ C ICCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  ISLVVVSLILSSFLLQHATADSST---------TYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein9.5e-1850.6Show/hide
Query:  ISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +   ++SL+L+S     ++ADSS         +   R  + CL+ C ICCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  ISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein3.9e-1980.43Show/hide
Query:  VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCGICC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein2.5e-1850.57Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVK-------DRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   +   ++SL+L+S     ++ADSS      V+       + CLKYC ICCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVK-------DRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein2.3e-1952.81Show/hide
Query:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  ++ ++++SL+++S L   +TADSS               +DRCLKYC ICC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSASISLVVVSLILSSFLLQHATADSS--------TTYVPRVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGCTTCAATCAGTTTGGTGGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAACATGCCACAGCTGATTCTTCTACAACCTATGTACCAAGGGTGAAGGA
CAGGTGCCTTAAGTATTGTGGAATCTGCTGCCAACAATGCAAATGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGCTACAGGGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGCTTCAATCAGTTTGGTGGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAACATGCCACAGCTGATTCTTCTACAACCTATGTACCAAGGGTGAAGGA
CAGGTGCCTTAAGTATTGTGGAATCTGCTGCCAACAATGCAAATGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGCTACAGGGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MKSASISLVVVSLILSSFLLQHATADSSTTYVPRVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP