; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011397 (gene) of Snake gourd v1 genome

Gene IDTan0011397
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCoatomer subunit zeta
Genome locationLG01:101412511..101416492
RNA-Seq ExpressionTan0011397
SyntenyTan0011397
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
InterPro domainsIPR011012 - Longin-like domain superfamily
IPR022775 - AP complex, mu/sigma subunit
IPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]7.7e-7698.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]5.9e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]1.3e-7599.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPP EF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_022936551.1 uncharacterized protein LOC111443125 [Cucurbita moschata]5.0e-7597.96Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_038896955.1 TSET complex member tstD [Benincasa hispida]1.3e-7598.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        +PTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

TrEMBL top hitse value%identityAlignment
A0A1S3CRC6 Coatomer subunit zeta2.9e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5A7TBS4 Coatomer subunit zeta3.7e-7698.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5D3E691 Coatomer subunit zeta2.9e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A6J1BYX2 Coatomer subunit zeta6.4e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPP EF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A6J1IMX0 Coatomer subunit zeta2.4e-7597.96Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

SwissProt top hitse value%identityAlignment
C0HLF1 TSET complex member tstD3.5e-1532.64Show/hide
Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELAL++V F I  S+KD C 
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-

Query:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK
         K  TE+ F+++  K  L LDEI+  G L+  + + I+    LK
Subjt:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK

Q54CA7 Probable coatomer subunit zeta-B8.2e-0428.78Show/hide
Query:  AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKD-EYDELALAEVIFVITSSIKDACGK
        A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   ++ +   DV ++VVG     +ELAL +V+  + S  K AC  
Subjt:  AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKD-EYDELALAEVIFVITSSIKDACGK

Query:  AP----TERLFLDKYGKICLCLDEIVWTGILENTEKDRI
              T++ FL+ Y  I L +DEIV  GI+   +++ I
Subjt:  AP----TERLFLDKYGKICLCLDEIVWTGILENTEKDRI

Q5NA06 Coatomer subunit zeta-32.5e-0525.95Show/hide
Query:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTE
        +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  + D+  +V G DE +EL LA V+   + +I          
Subjt:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTE

Query:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI
        R  L+    I LCLDE+V  GI+  T+   I
Subjt:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI

Arabidopsis top hitse value%identityAlignment
AT1G15370.1 SNARE-like superfamily protein4.4e-6981.51Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYIVYT+LGDV++++VGKDEYDELALAE I++IT+++KD CGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE
         PTER+FLDKYG+ICLCLDEIVW G+LENT+KDRIKRLIRLKPP+E
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCT
GGGAGCAGATAATCTCAAAGGTGCAAAAAATGAGGAGCTCTATGTTGCTTCACACAAGTCTGTATACATTGTTTACACCGTGCTTGGTGATGTTGCAGTTTATGTTGTTG
GGAAGGATGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACCGAGCGATTGTTTCTTGACAAA
TATGGAAAGATTTGTTTGTGTCTTGATGAGATTGTCTGGACGGGCATCTTGGAGAACACAGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAGCCTCCAAATGAGTT
TTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTAAAAAAAAAAAGAAGAAGAAGAAAAGAACGAGAAAGAATCTGGGCTTGTAAGATTTATTTCTAGGCTTCGATTTTCCTCGGTGGCCAAACTCTCTTCACCAG
ATTTCTGGCTTGAGAAACTCCGATCGAACAGTTGAAAGTAGACGGCGAAAGATTAGGCATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAAC
GGTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGGTGCAAAAAATGAGGAGCTCTATGTTGCTTCA
CACAAGTCTGTATACATTGTTTACACCGTGCTTGGTGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAAC
ATCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATTTGTTTGTGTCTTGATGAGATTGTCTGGACGGGCATCTTGG
AGAACACAGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAGCCTCCAAATGAGTTTTGATTAATGAAACGGTTGCTTGTCCTCTCATTCATCCACATCTACGTCGTT
ATCGTCCTGCTTTCAACTGTTTTAACCATCAAATGACAAGATTGTTTCGGCTTTCTGTAATCATGGTGATCGATAAGTTTACTCTACTTCCTATTCTATTTGCCTCATAT
TATTCTTTATCGGACCCGTTCGGTTTGTAAGTTAGAACACAAAGTTGTAAAGAATTCAAGGGATTGTTTGGATTAAGATTTCCATGAGGGTAGGAAGTTTGAGAGTACAG
ACTACATTATTATTTTCTCATAGAATGCAGTGGGATTGTGAAGTAAATTTGTAGTTGAGATCTGAAGATTAGTTGTTGAAGTGGTGTTCTTGTACTATTACTTCCCTAAG
CACAGTATTGTTTTTTTTATTAGTCTGAATTTGATATTTTGTTTATTTTTTTTTGGGTAACTACAGATTAAAAGGG
Protein sequenceShow/hide protein sequence
MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDK
YGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF