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Tan0011410 (gene) of Snake gourd v1 genome

Gene IDTan0011410
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTubby-like F-box protein 8
Genome locationLG01:6875141..6883486
RNA-Seq ExpressionTan0011410
SyntenyTan0011410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]1.4e-1169.84Show/hide
Query:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDD
        ME+SA     A+LC  LLS A VTVSADAADCID CFTACVQKD+R MQRCE KC IKC P +
Subjt:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDD

KAE9595095.1 hypothetical protein Lalb_Chr18g0060771 [Lupinus albus]7.8e-1056.9Show/hide
Query:  AAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        A ++  F++ +   TV++DA+DC+DAC TACVQ+DTRLMQRC+ KC+IKC PD +VE+
Subjt:  AAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2083.33Show/hide
Query:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVE
        M+KS AATT A+LCF LLSAAA TVSADAADCID CFTACVQKDTRLMQRCEGKCRIKC PD + E
Subjt:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVE

XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]4.6e-1880.88Show/hide
Query:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        MEKSAAA  AA+LC  LLSA A VTVSADAADCIDACFTACVQKDTR+MQRCEGKCRIKC PD++V++
Subjt:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]3.6e-1570.13Show/hide
Query:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKD---------TRLMQRCEGKCRIKCDPDDEVED
        MEKSAAA  AA+LC  LLSA A VTVSADAADCIDACFTACVQKD          R+MQRCEGKCRIKC PD++V++
Subjt:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKD---------TRLMQRCEGKCRIKCDPDDEVED

TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein5.6e-1470.15Show/hide
Query:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        ME+SA     A+LC  LLS A VTVSADAADCID CFTACVQKD+R MQRCE KC IKC PD++VE+
Subjt:  MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X22.2e-1880.88Show/hide
Query:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        MEKSAAA  AA+LC  LLSA A VTVSADAADCIDACFTACVQKDTR+MQRCEGKCRIKC PD++V++
Subjt:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X11.8e-1570.13Show/hide
Query:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKD---------TRLMQRCEGKCRIKCDPDDEVED
        MEKSAAA  AA+LC  LLSA A VTVSADAADCIDACFTACVQKD          R+MQRCEGKCRIKC PD++V++
Subjt:  MEKSAAATTAAVLCFFLLSA-AAVTVSADAADCIDACFTACVQKD---------TRLMQRCEGKCRIKCDPDDEVED

A0A2P5EEC4 Uncharacterized protein3.5e-0869.77Show/hide
Query:  VSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        V+ADAADC DAC TACVQ +TRLMQRC+ KC+IKC PD  V++
Subjt:  VSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

A0A6A4NXS4 Uncharacterized protein3.8e-1056.9Show/hide
Query:  AAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED
        A ++  F++ +   TV++DA+DC+DAC TACVQ+DTRLMQRC+ KC+IKC PD +VE+
Subjt:  AAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCTGCAGCGGCGACGACGGCGGCTGTTTTGTGCTTCTTCCTGCTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCCGACTGCATCGACGCCTGCTT
CACCGCATGTGTCCAGAAAGATACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGATCCAGATGATGAAGTCGAAGATATTTTTCATTGA
mRNA sequenceShow/hide mRNA sequence
CCGATATTTAGGTGGGAATTCTGAAAAGTTCATAAATAAAAAATTGCTTTACCAATTAGTATACGCAGAAACAAACTACCAAAGGATCTGATCCAAAACCAGGGGCGCCG
ATGGAGAAATCTGCAGCGGCGACGACGGCGGCTGTTTTGTGCTTCTTCCTGCTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCCGACTGCATCGACGCCTGCTT
CACCGCATGTGTCCAGAAAGATACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGATCCAGATGATGAAGTCGAAGATATTTTTCATTGAGAAGTGA
TTGGTAGGTAAAATAATAGACGATATCAATGTTATGGAAAATCAAAACATATATTCTCCCATTGTAAGAAGAAAAAAAAATAGGAGAATATTTTATGTTATAAAATAATG
TTTTTATTTTCTTTATAATCTCATGTGTGTGAACGTTGGATATTGCATTTTTCTATAGAAAATGCATTTTCTTTGTGGAATATATGTTGTTTTAGTTTCTA
Protein sequenceShow/hide protein sequence
MEKSAAATTAAVLCFFLLSAAAVTVSADAADCIDACFTACVQKDTRLMQRCEGKCRIKCDPDDEVEDIFH