; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011416 (gene) of Snake gourd v1 genome

Gene IDTan0011416
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box domain-containing protein
Genome locationLG06:28591650..28593076
RNA-Seq ExpressionTan0011416
SyntenyTan0011416
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592887.1 F-box protein PP2-B11, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4473.48Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK ++ QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

XP_022960303.1 F-box protein PP2-B11-like isoform X2 [Cucurbita moschata]1.1e-4373.48Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

XP_023005066.1 F-box protein PP2-B11-like isoform X1 [Cucurbita maxima]6.9e-4373.13Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA
        MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY HLS HPLLIGTGNT  SF 
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA

Query:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD
        LEKESGKV YM GAKDLKIVW D T +   WE D
Subjt:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD

XP_023005068.1 F-box protein PP2-B11-like isoform X2 [Cucurbita maxima]2.1e-4474.24Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

XP_023513884.1 F-box protein PP2-B11-like isoform X2 [Cucurbita pepo subsp. pepo]5.3e-4372.73Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        M+DID  +QLPEECISRI+AL PVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

TrEMBL top hitse value%identityAlignment
A0A6J1H715 F-box protein PP2-B11-like isoform X11.7e-4272.39Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA
        M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY  LS HPLLIGTGNT  SF 
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA

Query:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD
        LEKESGKV YM GAKDLKIVW D T +   WE D
Subjt:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD

A0A6J1H8G3 F-box protein PP2-B11-like isoform X25.1e-4473.48Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

A0A6J1IZ41 putative F-box protein PP2-B129.4e-3055.38Show/hide
Query:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC
        +QLP ECIS I+A T  KD C  AAVS  FRS A+S+  W   LPS+ ++II Q+S PS + FLNSLS K LY HL   PLLIG+GN+SFALEK+SGK C
Subjt:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC

Query:  YMIGAKDLKIVWYDATSECCYWESDFNILS
        Y+IGA+DL I+W +++    YW  + N +S
Subjt:  YMIGAKDLKIVWYDATSECCYWESDFNILS

A0A6J1KTW8 F-box protein PP2-B11-like isoform X13.3e-4373.13Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA
        MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY HLS HPLLIGTGNT  SF 
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFA

Query:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD
        LEKESGKV YM GAKDLKIVW D T +   WE D
Subjt:  LEKESGKVCYMIGAKDLKIVWYDATSECCYWESD

A0A6J1L176 F-box protein PP2-B11-like isoform X21.0e-4474.24Show/hide
Query:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE
        MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LE
Subjt:  MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALE

Query:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD
        KESGKV YM GAKDLKIVW D T +   WE D
Subjt:  KESGKVCYMIGAKDLKIVWYDATSECCYWESD

SwissProt top hitse value%identityAlignment
Q3E6P4 F-box protein At2g022403.9e-1739.52Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPE+CIS II+ T  +D C  A+VS+ F S  +SD  W+  LP   + ++ +S            S K+LY  L H+P+LI  G  SF LEK SGK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDATSECCYWE
        C M+ +K+L I W  +     YW+
Subjt:  CYMIGAKDLKIVWYDATSECCYWE

Q6NPT8 F-box protein PP2-B12.6e-2142.4Show/hide
Query:  RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGK
        RF  LPE+CIS++I+ T  +D C VA+VS+  +S A SD  WE  LPS    ++LQS+        N LS K+++L L+ + +L+  G  SF +EK SGK
Subjt:  RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGK

Query:  VCYMIGAKDLKIVWYDATSECCYWE
         CYM+ A +L I+W D+ +   YW+
Subjt:  VCYMIGAKDLKIVWYDATSECCYWE

Q949S5 F-box protein PP2-B114.8e-1540.18Show/hide
Query:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC
        + LPE+CI++I++LT   D C ++AVS IFRS A SD  W   LP++         P   +      + K L+  L  +PLLI     SF+LE++SG  C
Subjt:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC

Query:  YMIGAKDLKIVW
        YM+ A+ L IVW
Subjt:  YMIGAKDLKIVW

Q9FLU7 Putative F-box protein PP2-B122.5e-1945.69Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPEECI+ +I+ T   D C ++AVS++ RS A+S+  WE  LPS+ +  I      SLS+F N    K L+L     PLLI  G TSF +EK SGK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDA
        C+M+ A+ L IVW D+
Subjt:  CYMIGAKDLKIVWYDA

Q9ZVR5 Putative F-box protein PP2-B23.9e-1740.65Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPE+CIS II+ T  +D C  A+VS+ F S  NSD  W+  LPS+   ++    PPS        S K+LY  +  +P+L+  G  SF LEKE+GK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDATSECCYW
        C+M+  K  K +W    S   YW
Subjt:  CYMIGAKDLKIVWYDATSECCYW

Arabidopsis top hitse value%identityAlignment
AT1G80110.1 phloem protein 2-B113.4e-1640.18Show/hide
Query:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC
        + LPE+CI++I++LT   D C ++AVS IFRS A SD  W   LP++         P   +      + K L+  L  +PLLI     SF+LE++SG  C
Subjt:  SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVC

Query:  YMIGAKDLKIVW
        YM+ A+ L IVW
Subjt:  YMIGAKDLKIVW

AT2G02230.1 phloem protein 2-B11.9e-2242.4Show/hide
Query:  RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGK
        RF  LPE+CIS++I+ T  +D C VA+VS+  +S A SD  WE  LPS    ++LQS+        N LS K+++L L+ + +L+  G  SF +EK SGK
Subjt:  RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGK

Query:  VCYMIGAKDLKIVWYDATSECCYWE
         CYM+ A +L I+W D+ +   YW+
Subjt:  VCYMIGAKDLKIVWYDATSECCYWE

AT2G02240.1 F-box family protein2.8e-1839.52Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPE+CIS II+ T  +D C  A+VS+ F S  +SD  W+  LP   + ++ +S            S K+LY  L H+P+LI  G  SF LEK SGK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDATSECCYWE
        C M+ +K+L I W  +     YW+
Subjt:  CYMIGAKDLKIVWYDATSECCYWE

AT2G02250.1 phloem protein 2-B22.8e-1840.65Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPE+CIS II+ T  +D C  A+VS+ F S  NSD  W+  LPS+   ++    PPS        S K+LY  +  +P+L+  G  SF LEKE+GK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDATSECCYW
        C+M+  K  K +W    S   YW
Subjt:  CYMIGAKDLKIVWYDATSECCYW

AT5G24560.1 phloem protein 2-B121.8e-2045.69Show/hide
Query:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV
        F  LPEECI+ +I+ T   D C ++AVS++ RS A+S+  WE  LPS+ +  I      SLS+F N    K L+L     PLLI  G TSF +EK SGK 
Subjt:  FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKV

Query:  CYMIGAKDLKIVWYDA
        C+M+ A+ L IVW D+
Subjt:  CYMIGAKDLKIVWYDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATATAGATAGGTTCAGCCAGCTACCGGAGGAGTGCATCTCTCGCATCATCGCCTTAACGCCGGTGAAGGATACTTGTGGAGTTGCCGCAGTCTCGCGGATCTT
CAGATCAATGGCTAATTCCGACCCTGCTTGGGAGGCACGGCTGCCCTCGAACATTAAAAAGATCATTTTGCAGTCCTCGCCACCGTCATTATCACAGTTTCTAAATTCCT
TGTCTTTGAAGGATCTCTACCTTCATCTCTCTCATCATCCACTTCTCATCGGCACTGGAAACACAAGCTTTGCTTTGGAAAAAGAGAGTGGGAAGGTATGTTATATGATA
GGAGCAAAAGACTTGAAGATTGTGTGGTATGATGCTACCTCAGAATGTTGCTATTGGGAATCTGACTTCAATATCCTCTCTTTTTGGTTGCATTGCATTTCTATTTCTTC
TCCCCATCCATGTTTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ACTGAATCCATTTTGTAAAGGAAAATGAAAAATGAATAAAGAAAATGGAGGAAACTGCTCCATGCCAGTTCATCTTCTTCTTCACACCCTCTCCTCCGTTTTCAGCAGCT
CGGTTTCGCCGCCGCTTCTCTTCCGTACGCTGCTGCAACCGCCACCATCGTCTTTCTTCCGTTCGTGCTGCCGAAGCCTCGTTCCTAGCAGTTTTGCACTGATTTTCTAC
TCTCTTGCTTTGCTGTGTTACAGAGAAAGGGAAGCAAGAAATGGAAGATATAGATAGGTTCAGCCAGCTACCGGAGGAGTGCATCTCTCGCATCATCGCCTTAACGCCGG
TGAAGGATACTTGTGGAGTTGCCGCAGTCTCGCGGATCTTCAGATCAATGGCTAATTCCGACCCTGCTTGGGAGGCACGGCTGCCCTCGAACATTAAAAAGATCATTTTG
CAGTCCTCGCCACCGTCATTATCACAGTTTCTAAATTCCTTGTCTTTGAAGGATCTCTACCTTCATCTCTCTCATCATCCACTTCTCATCGGCACTGGAAACACAAGCTT
TGCTTTGGAAAAAGAGAGTGGGAAGGTATGTTATATGATAGGAGCAAAAGACTTGAAGATTGTGTGGTATGATGCTACCTCAGAATGTTGCTATTGGGAATCTGACTTCA
ATATCCTCTCTTTTTGGTTGCATTGCATTTCTATTTCTTCTCCCCATCCATGTTTCAATTAA
Protein sequenceShow/hide protein sequence
MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMI
GAKDLKIVWYDATSECCYWESDFNILSFWLHCISISSPHPCFN