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Tan0011417 (gene) of Snake gourd v1 genome

Gene IDTan0011417
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationLG06:51542875..51560042
RNA-Seq ExpressionTan0011417
SyntenyTan0011417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459744.1 PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]3.5e-4267.08Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA
        MWAASSTSPSPS RRLPI T PPP+ PVS  YAKS PP+ DA NT PN+  +IKSFGHKILS V S  P + NQTTPK ES     QISGSDVLRALQKA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA

Query:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD
        AAVKEKNR +Q+KEKKK+      ++   SE+  RVRPL+IK DWGLRLT+LEKRL E+S+
Subjt:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]2.5e-5174.69Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-----QISGSDVLRALQKAA
        MW A STSPSPSC RLP+PTRPPP+PPVSA YAK+QPPETDA N TPN+ +SIKSFGHKILS   S+NP       KQES     QISG DVLRALQKAA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-----QISGSDVLRALQKAA

Query:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AVKEKNR RQ KE+KK+G P TEGS S+NSE+ RRVRPLRIK+DWGLRLTELEKRLQEIS+T
Subjt:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]8.4e-5275.31Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQ-----ISGSDVLRALQKAA
        MWAA STSPSPSC RLP+PTRP P+PPVSA YAK+QPP+TDA N TPN+ SSIKSFGHKILS  KS+NP       KQESQ     ISG DVLRALQKAA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQ-----ISGSDVLRALQKAA

Query:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AVKEKNR RQ+KE+KK+G P TEGS S+NSE+ RRVRPLRIK+DWGLRLTELEKRLQEIS+T
Subjt:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

XP_023547620.1 uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]3.5e-5073.46Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSN-----PNRNQTTPKQESQISGSDVLRALQKAA
        MWAA STSPSPSC RLP+PTRPPP+PPVSA YAK+QPPETDA N TPN+ SSIKSFGHKILS   S+N     P R Q +  + +QISG DVLRALQKAA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSN-----PNRNQTTPKQESQISGSDVLRALQKAA

Query:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AVKEKNR RQ +E+KK+G P TEGS S+NSE+ RRVRPLRIK+DWGLRL ELEKRLQEIS+T
Subjt:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]1.3e-4972.73Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVV-----KSSNPNRNQTTPKQE-----SQISGSDVLRA
        MWAASST P+PSC RLPI TRP P+PPVSA YA+SQPP+TDAGNTTPN  SSIKSFGHKILS V     KS NP  N+TTPKQE     +QISGSD+LRA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVV-----KSSNPNRNQTTPKQE-----SQISGSDVLRA

Query:  LQKAAAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD
        LQKAAAVKEKNR RQ+K KKKEGP+TEGS   +SE+  RVRPL+IK DWGLRL++LEKRLQE S+
Subjt:  LQKAAAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD

TrEMBL top hitse value%identityAlignment
A0A1S3CAW4 uncharacterized protein LOC1034987861.7e-4267.08Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA
        MWAASSTSPSPS RRLPI T PPP+ PVS  YAKS PP+ DA NT PN+  +IKSFGHKILS V S  P + NQTTPK ES     QISGSDVLRALQKA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA

Query:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD
        AAVKEKNR +Q+KEKKK+      ++   SE+  RVRPL+IK DWGLRLT+LEKRL E+S+
Subjt:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD

A0A5D3DMB8 Chaperone ClpB1.7e-4267.08Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA
        MWAASSTSPSPS RRLPI T PPP+ PVS  YAKS PP+ DA NT PN+  +IKSFGHKILS V S  P + NQTTPK ES     QISGSDVLRALQKA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNP-NRNQTTPKQES-----QISGSDVLRALQKA

Query:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD
        AAVKEKNR +Q+KEKKK+      ++   SE+  RVRPL+IK DWGLRLT+LEKRL E+S+
Subjt:  AAVKEKNRARQLKEKKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISD

A0A6J1DX20 serine/arginine repetitive matrix protein 11.4e-3964.02Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-------QISGSDVLRALQK
        MWAA++ SPSPSCRR P+PT+PPP P   A YAKS PP+T A + TP++  S+KS GH ILS VKS  PN+ Q TPKQES       Q+ GSDVL ALQK
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-------QISGSDVLRALQK

Query:  AAAVKEKNRARQLKE-KKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AAA KEKNR+R++ + KKKEGPST  ++ +NS I R VRPLRI SDWG RL+ELEKRLQEISDT
Subjt:  AAAVKEKNRARQLKE-KKKEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

A0A6J1H4Y8 uncharacterized protein LOC1114604381.2e-5174.69Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-----QISGSDVLRALQKAA
        MW A STSPSPSC RLP+PTRPPP+PPVSA YAK+QPPETDA N TPN+ +SIKSFGHKILS   S+NP       KQES     QISG DVLRALQKAA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQES-----QISGSDVLRALQKAA

Query:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AVKEKNR RQ KE+KK+G P TEGS S+NSE+ RRVRPLRIK+DWGLRLTELEKRLQEIS+T
Subjt:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

A0A6J1L2U1 uncharacterized protein LOC1114993294.1e-5275.31Show/hide
Query:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQ-----ISGSDVLRALQKAA
        MWAA STSPSPSC RLP+PTRP P+PPVSA YAK+QPP+TDA N TPN+ SSIKSFGHKILS  KS+NP       KQESQ     ISG DVLRALQKAA
Subjt:  MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQ-----ISGSDVLRALQKAA

Query:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
        AVKEKNR RQ+KE+KK+G P TEGS S+NSE+ RRVRPLRIK+DWGLRLTELEKRLQEIS+T
Subjt:  AVKEKNRARQLKEKKKEG-PSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein2.2e-1038.62Show/hide
Query:  PPVSASYAKSQPPETDAGN---------TTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQISGSDVLRALQKAAAVKEKNRARQLKEKKK----E
        P V+ S A SQPP  +            T   +  S+   G +IL     SNP +    PK E++ISGSDVL A+Q+A A +++  A + K K +    E
Subjt:  PPVSASYAKSQPPETDAGN---------TTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQISGSDVLRALQKAAAVKEKNRARQLKEKKK----E

Query:  GPSTEGSDS-ENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT
          S+ G  + +N   Y  V PLRIKSDWG RL E EK L+E  +T
Subjt:  GPSTEGSDS-ENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCTGCCTCCTCAACCTCACCAAGCCCGTCCTGCCGCCGCCTCCCGATTCCTACCAGGCCGCCTCCGAGCCCTCCGGTCTCTGCCAGCTACGCCAAGTCTCAGCC
ACCCGAAACCGACGCCGGAAACACCACGCCAAACAGCGGTAGCAGCATCAAAAGCTTTGGCCACAAAATTCTCTCAGTTGTCAAGTCTTCAAATCCCAATCGAAACCAAA
CGACCCCAAAACAGGAGTCACAAATTAGTGGGTCGGATGTTCTAAGGGCTCTGCAGAAAGCGGCTGCCGTGAAAGAGAAGAACAGGGCCCGACAATTGAAAGAGAAGAAG
AAAGAAGGGCCGTCCACCGAAGGGAGCGACTCTGAGAACTCTGAGATTTACCGTAGAGTGAGGCCTCTGAGGATCAAGAGCGATTGGGGCTTGAGGCTCACCGAGTTGGA
AAAACGCCTTCAGGAGATCTCTGACACGCGCGATTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGCTGCCTCCTCAACCTCACCAAGCCCGTCCTGCCGCCGCCTCCCGATTCCTACCAGGCCGCCTCCGAGCCCTCCGGTCTCTGCCAGCTACGCCAAGTCTCAGCC
ACCCGAAACCGACGCCGGAAACACCACGCCAAACAGCGGTAGCAGCATCAAAAGCTTTGGCCACAAAATTCTCTCAGTTGTCAAGTCTTCAAATCCCAATCGAAACCAAA
CGACCCCAAAACAGGAGTCACAAATTAGTGGGTCGGATGTTCTAAGGGCTCTGCAGAAAGCGGCTGCCGTGAAAGAGAAGAACAGGGCCCGACAATTGAAAGAGAAGAAG
AAAGAAGGGCCGTCCACCGAAGGGAGCGACTCTGAGAACTCTGAGATTTACCGTAGAGTGAGGCCTCTGAGGATCAAGAGCGATTGGGGCTTGAGGCTCACCGAGTTGGA
AAAACGCCTTCAGGAGATCTCTGACACGCGCGATTCATAG
Protein sequenceShow/hide protein sequence
MWAASSTSPSPSCRRLPIPTRPPPSPPVSASYAKSQPPETDAGNTTPNSGSSIKSFGHKILSVVKSSNPNRNQTTPKQESQISGSDVLRALQKAAAVKEKNRARQLKEKK
KEGPSTEGSDSENSEIYRRVRPLRIKSDWGLRLTELEKRLQEISDTRDS