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Tan0011418 (gene) of Snake gourd v1 genome

Gene IDTan0011418
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHomeodomain-like superfamily protein
Genome locationLG04:51402502..51402935
RNA-Seq ExpressionTan0011418
SyntenyTan0011418
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601716.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2785.53Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH
        MR VVRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+L+LMDVKG+SISHVKSHLQMYRSMR +D  RH
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH

KAG7032464.1 putative Myb family transcription factor [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2785.53Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH
        MR VVRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+L+LMDVKG+SISHVKSHLQMYRSMR +D  RH
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH

XP_022158770.1 putative Myb family transcription factor At1g14600 [Momordica charantia]4.2e-2890Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR
        VRQY+RSK PRLRWTP+LHHSF+LAIQTLGGHQKATPKLVLQLMDVKGL+ISHVKSHLQMYRSMR D GR
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR

XP_022991492.1 putative Myb family transcription factor At1g14600 [Cucurbita maxima]4.2e-2887.01Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRHA
        MR VVRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+LQLMDVKG+SISHVKSHLQMYRSMR +D  RHA
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRHA

XP_023516803.1 putative Myb family transcription factor At1g14600 [Cucurbita pepo subsp. pepo]1.2e-2786.84Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH
        MR VVRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+LQLMDVKG+SISHVKSHLQMYRSMR +D  RH
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH

TrEMBL top hitse value%identityAlignment
A0A0A0KSV1 SANT domain-containing protein3.8e-2788.57Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR
        VRQYIRSK PRLRWTP LHHSF+LAI+ LGGHQKATPKLVLQLMDVKGL+ISHVKSHLQMYRSMR D GR
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR

A0A1S4E2S3 putative Myb family transcription factor At1g146003.8e-2788.57Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR
        VRQYIRSK PRLRWTP LHHSF+LAI+ LGGHQKATPKLVLQLMDVKGL+ISHVKSHLQMYRSMR D GR
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR

A0A6J1E1Y6 putative Myb family transcription factor At1g146002.0e-2890Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR
        VRQY+RSK PRLRWTP+LHHSF+LAIQTLGGHQKATPKLVLQLMDVKGL+ISHVKSHLQMYRSMR D GR
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGR

A0A6J1EP17 myb family transcription factor PHL6-like2.3e-2784.21Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH
        MR  VRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+LQLMDVKG+S+SHVKSHLQMYRSMR +D  RH
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRH

A0A6J1JLZ1 putative Myb family transcription factor At1g146002.0e-2887.01Show/hide
Query:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRHA
        MR VVRQY+RSKTPRLRWTPQLH+SFLLAIQ+LGGHQKATPKL+LQLMDVKG+SISHVKSHLQMYRSMR +D  RHA
Subjt:  MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGRHA

SwissProt top hitse value%identityAlignment
A0A0P0X0C0 Myb family transcription factor MPH16.3e-1965.15Show/hide
Query:  RRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRS
        RR VRQY RS+ PR+RWT ++H  F+ A++ LGG  +ATPK +LQLM VKG+SISH+KSHLQMYRS
Subjt:  RRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRS

A3AWH5 Myb family transcription factor MOF13.0e-2176.92Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        VRQYIRSK PRLRWT +LH SF+ AI+ LGG  KATPKL+LQLM VKGL+ISHVKSHLQMYR  R
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Q700D9 Putative Myb family transcription factor At1g146005.2e-2172.31Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        VR Y+RS  PRLRWTP+LH SF+ A+  LGG  KATPKLVL++MDVKGL+ISHVKSHLQMYR  R
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Q93WJ9 Transcription repressor KAN11.5e-1560.34Show/hide
Query:  KTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        + PR+RWT  LH  F+ A++ LGGH++ATPK VL+LMDVK L+++HVKSHLQMYR+++
Subjt:  KTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Q9C616 Probable transcription factor KAN21.9e-1560.34Show/hide
Query:  KTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        + PR+RWT  LH  F+ A++ LGGH++ATPK VL+LMDVK L+++HVKSHLQMYR+++
Subjt:  KTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

Arabidopsis top hitse value%identityAlignment
AT1G14600.1 Homeodomain-like superfamily protein3.7e-2272.31Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        VR Y+RS  PRLRWTP+LH SF+ A+  LGG  KATPKLVL++MDVKGL+ISHVKSHLQMYR  R
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR

AT2G02060.1 Homeodomain-like superfamily protein6.9e-2170.97Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYR
        VR Y+RS  PRLRWTP LH  F+ A++ LGG  +ATPKLVL++MDVKGL+ISHVKSHLQMYR
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYR

AT2G38300.1 myb-like HTH transcriptional regulator family protein8.2e-2266.2Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGR
        VR Y+RSK PRLRWTP LH  F+ A++ LGG ++ATPKLV Q+M++KGLSI+HVKSHLQMYRS + DD G+
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR-DDFGR

AT2G40260.1 Homeodomain-like superfamily protein5.7e-2374.63Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDD
        VR Y RSKTPRLRWTP+LH  FL A++ LGG  +ATPKLVLQLM+VKGLSI+HVKSHLQMYRS + D
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDD

AT2G42660.1 Homeodomain-like superfamily protein6.3e-2272.31Show/hide
Query:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR
        VRQYIRS  PRLRWTP LH SF+ A+Q LGG  +ATPKLVL++M++KGLSI+HVKSHLQMYRS +
Subjt:  VRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGTGTTGTTAGACAGTACATAAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATCACTCCTTCCTTCTTGCCATTCAAACCCTTGGTGGCCATCA
AAAGGCCACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGTCTCTCTATATCACATGTTAAGAGCCATCTTCAGATGTATAGAAGTATGAGAGATGACTTTGGAA
GACATGCTGGTACATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGTGTTGTTAGACAGTACATAAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATCACTCCTTCCTTCTTGCCATTCAAACCCTTGGTGGCCATCA
AAAGGCCACTCCCAAGCTTGTGCTTCAGTTGATGGATGTGAAAGGTCTCTCTATATCACATGTTAAGAGCCATCTTCAGATGTATAGAAGTATGAGAGATGACTTTGGAA
GACATGCTGGTACATTTTGA
Protein sequenceShow/hide protein sequence
MRRVVRQYIRSKTPRLRWTPQLHHSFLLAIQTLGGHQKATPKLVLQLMDVKGLSISHVKSHLQMYRSMRDDFGRHAGTF