CuGenDBv2

Gene ID	Tan0011431
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Rab5-interacting
Genome location	LG05:2899681..2902706
RNA-Seq Expression	Tan0011431
Synteny	Tan0011431
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004143124.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

4.6e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFK+AKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

3.5e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFK+AKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

2.7e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFK+AKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_023532324.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita pepo subsp. pepo]

3.5e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFK+AKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWIL+YSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

1.6e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKE+KPVKFNLHQHQ+HQNGHLAPFK+AKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

2.2e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFK+AKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

1.7e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFK+AKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A5D3DK85 Rab5-interacting

1.7e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFK+AKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1D489 uncharacterized protein C20orf24 homolog

2.2e-64

96.9

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQEHQNGHLAPFK+AKLFD EASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF+IFLVISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

1.3e-64

96.12

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFK+AKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWFLIFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

5.3e-15

37.84

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Query:  NGHLAPFKIAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKIAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAH
        +     ++  H
Subjt:  LAWILVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

3.9e-18

39.29

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Query:  NGHLAPFKIAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKIAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAHF
        + WI+ Y+  H+
Subjt:  LAWILVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

1.3e-48

69.92

Show/hide

Query:  MKEAKPVKFNLHQHQE----HQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FL IS+ IVYGYYA++LK+DEE
Subjt:  MKEAKPVKFNLHQHQE----HQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAWILVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF

AT5G59410.1 Rab5-interacting family protein

5.4e-55

78.46

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Query:  MKEAKPVKFN-LHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFG
        MKE+K  K N L Q + HQN HL+P K+AKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FL IS+ IVYGYYAMILKVDEE+FG
Subjt:  MKEAKPVKFN-LHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWILVYSLAHF
        GH ALLQEGLFAS+TLFLLAWILVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWILVYSLAHF

Sequences

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CDS sequence

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ATGAAAGAAGCGAAACCGGTTAAGTTCAATCTTCACCAGCATCAAGAGCACCAAAACGGTCACTTGGCGCCGTTCAAGATCGCCAAATTGTTCGATCCAGAGGCCTCCTG
GGACAAGGACCAATTAGGAGACGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTCGGACTTCTATGGGGCTCCATACCTTTGGTTGGAGGCATATGGTTTTTAA
TTTTCCTGGTTATATCGACCAGCATTGTATATGGATATTATGCAATGATTTTAAAAGTTGACGAGGAAGAATTTGGAGGCCATGGAGCTCTCCTGCAAGAGGGGCTTTTT
GCTTCTATAACTCTATTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGA

mRNA sequence

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CTGGAGCCGAAAAGAAAAAGAGAAATGCAGTACCAGTAATCTTCTTCGTGATAAAGTCGAAGCTGAAAAATCCACACGAGAGACGAGACATTTTTGTTTTGCAGCAGTAT
TTGACTGCCAATGAACCCTGCAAATTGAAGTTGCTTCTTCCTTGAAAACCCTAGGAGTTGCCGTTCTTAGTGTTTCTGTTCTGACTGGAGAATTTTACCCCTGCTCTCTC
GCCGGATTCTAGATCTAAGCTTACTGTATAGCATTTGATTTTTCTTTTGTTCTATTTTAGTTTTCCGAAGAGTGGTTGATTGGATTATCCGTTATGAAAGAAGCGAAACC
GGTTAAGTTCAATCTTCACCAGCATCAAGAGCACCAAAACGGTCACTTGGCGCCGTTCAAGATCGCCAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGACCAATTAG
GAGACGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTCGGACTTCTATGGGGCTCCATACCTTTGGTTGGAGGCATATGGTTTTTAATTTTCCTGGTTATATCG
ACCAGCATTGTATATGGATATTATGCAATGATTTTAAAAGTTGACGAGGAAGAATTTGGAGGCCATGGAGCTCTCCTGCAAGAGGGGCTTTTTGCTTCTATAACTCTATT
TCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGATTGGCGAAGAAAGATTTTGCATCCATGAAATTACTTGGTGAAGTTGGATCAATGAACTTAGTTATAC
TTCCTGCCCTGCTCATTTTCGATTGCTTCTAATTGGCGGCACAAATTCTTTTAACATTCCTGATGTTGAACAAATTGATTTTAGCAGAGCAGGAAAACTCTAGCATCTGA
ATGATATGTCGTGATAGATTTTTTATCTCCATTTCGTTGTAGACATTCTTCCAATGCCATATAGTGATAGACTATGGACGTAATCCTTGTTAAAATTAACACCTTCTATT
GGCGTCAATTAATTAGCTAGATGCTTGTGGTTGAAGTTGAGACATTAACAATGTTGTGTGCATTTGATGATAGTTGGATAGGCACCTCATTTCTCAATAGCTTTTTTTTA
TCCTGCACCATCCTAAGAGAAGCCATCAAGCAATTTATGCCTTGGAAATCTTTGAATGTGGTAAAATGATATAAACTGCAGTATATAATATTATTTACTGGTGCGACTGA
ACGGTTTTTCAGCTGAAATAAGCCTGCGAAAGATTTGTTGTTGTATTACTTGATTGGAACTTTACATTATAAATAACCAACTATAGGGAACTAAGAAGTAAGTAGAAGCT
TCTTTTCCCTTCTCTCTCTTTGTGTAGCTTTTCTCTGCTTATTAGGAAAAGTGGGAAAGAGAAGCTGCTAACTGCCCGGAAACAACATCGTGAATACTTCATGGAGATCA
GGAAGATGGGAGATTCGAATCTTTGATAGGTTTCTGTAACTAACTTATTTTTGTCGGTTGAACTGTCCGTATAAATAGAATCATTGTTGAGTCTATGTTGCATGTGCAAT
GTTATTGGCGTAGTTCTTCTTTTTATGTCTACAATAGGTTGGATCTATGTTGTATGTGCAATGTTATTGTGCATGTTAGGAAAATAGCAGACCAACTTTTTCTAAGACTT
TAGTCCTTTTTGAATTCGAC

Protein sequence

Show/hide protein sequence

MKEAKPVKFNLHQHQEHQNGHLAPFKIAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWILVYSLAHF

Tan0011431 (gene) of Snake gourd v1 genome