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Tan0011442 (gene) of Snake gourd v1 genome

Gene IDTan0011442
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvesicle-associated protein 2-2-like
Genome locationLG09:33256780..33257894
RNA-Seq ExpressionTan0011442
SyntenyTan0011442
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR016763 - Vesicle-associated membrane-protein-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154614.1 vesicle-associated protein 1-2-like isoform X1 [Momordica charantia]1.8e-1461.25Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN
        MQAQEMAPPDM CKDKFLIQST+              FAK  G Y++EKKL  TLVSPSSSP DEA+KE   +GVS+P N
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN

XP_022154616.1 vesicle-associated protein 1-2-like isoform X2 [Momordica charantia]1.8e-1461.25Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN
        MQAQEMAPPDM CKDKFLIQST+              FAK  G Y++EKKL  TLVSPSSSP DEA+KE   +GVS+P N
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN

XP_038878362.1 vesicle-associated protein 1-3-like isoform X1 [Benincasa hispida]3.7e-1254.84Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPS----SSPTDEAMK-EGIALGVSDPINY-KCVEEL
        MQAQ +APPDM CKDKFLIQST+              FAK+GG YI+E+KL  TLVSPS     SP DEA+K E +AL V++P N  K VEE+
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPS----SSPTDEAMK-EGIALGVSDPINY-KCVEEL

XP_038878363.1 vesicle-associated protein 1-2-like isoform X2 [Benincasa hispida]3.7e-1254.84Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPS----SSPTDEAMK-EGIALGVSDPINY-KCVEEL
        MQAQ +APPDM CKDKFLIQST+              FAK+GG YI+E+KL  TLVSPS     SP DEA+K E +AL V++P N  K VEE+
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPS----SSPTDEAMK-EGIALGVSDPINY-KCVEEL

XP_038878617.1 LOW QUALITY PROTEIN: vesicle-associated protein 2-2-like [Benincasa hispida]6.7e-1454.46Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI---------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINELELKLH
        MQAQ+MAPPDMKCKDKFLIQSTI               F K     I+E+ L T LVSPSSS T EA+  G++   S     K +EELKLKINEL+ KLH
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI---------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINELELKLH

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A0A0LWK4 Uncharacterized protein8.0e-1351.82Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI------------------FAKKGG-NYIDEKKLVTTLV-SPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINEL
        MQAQ+MAPPDMKCKDKFLIQSTI                  F K G  N I+E++L T LV   SSSPT E +     +GVS+    K +EELKLKI +L
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI------------------FAKKGG-NYIDEKKLVTTLV-SPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINEL

Query:  ELKLHEVILS
        + KLHEV LS
Subjt:  ELKLHEVILS

A0A1S3BPU6 vesicle-associated protein 1-3-like5.2e-1248.15Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI-----------------FAKKGG-NYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINELEL
        MQAQ+MAPPDMKCKDKFLIQSTI                 F K G  N I+E+KL T LV  S++    +  E +++GVS+    K +EELKLKI +L+ 
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI-----------------FAKKGG-NYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINELEL

Query:  KLHEVILS
        KLHE  +S
Subjt:  KLHEVILS

A0A6J1DM49 vesicle-associated protein 2-2-like6.8e-1254.29Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI---------------FAKKGGNYIDEKKLVTTLVSPSS-SPTDEAM-KEGIALGVSD-PINY-KCVEELKLKINELE
        MQ Q +APPDM CKDKFLI STI               F +    YI++KKL+ TLV  S+ SP  EA+  E +ALGVSD P NY K VE+LKL I ELE
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI---------------FAKKGGNYIDEKKLVTTLVSPSS-SPTDEAM-KEGIALGVSD-PINY-KCVEELKLKINELE

Query:  LKLHE
        LKLHE
Subjt:  LKLHE

A0A6J1DMN1 vesicle-associated protein 1-2-like isoform X18.6e-1561.25Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN
        MQAQEMAPPDM CKDKFLIQST+              FAK  G Y++EKKL  TLVSPSSSP DEA+KE   +GVS+P N
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN

A0A6J1DP93 vesicle-associated protein 1-2-like isoform X28.6e-1561.25Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN
        MQAQEMAPPDM CKDKFLIQST+              FAK  G Y++EKKL  TLVSPSSSP DEA+KE   +GVS+P N
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPIN

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-21.4e-0650Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP
        MQA +  PPDM CKDKFLIQST              +F+K  G +I+E KL  TLV PS SP
Subjt:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP

Q8VZ95 Vesicle-associated protein 1-11.2e-0541.67Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG
        MQAQ+ AP DM+CKDKFL+Q  I              F+K+ G+ ++E KL  T V+P    SP  E  +EG
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG

Q9LVU1 Vesicle-associated protein 2-12.9e-0440.98Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSS
        +QAQ   PPDM+CKDKFL+QSTI              F K  G  + E KL  + ++PS++
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSPSSS

Q9SHC8 Vesicle-associated protein 1-22.3e-0437.5Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG
        MQAQ+ AP D++CKDKFL+Q  +              F+K+ G+ ++E KL    V+P    SP  E  +EG
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-21.0e-0750Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP
        MQA +  PPDM CKDKFLIQST              +F+K  G +I+E KL  TLV PS SP
Subjt:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP

AT1G08820.2 vamp/synaptobrevin-associated protein 27-21.0e-0750Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP
        MQA +  PPDM CKDKFLIQST              +F+K  G +I+E KL  TLV PS SP
Subjt:  MQAQEMAPPDMKCKDKFLIQST--------------IFAKKGGNYIDEKKLVTTLVSPSSSP

AT3G60600.1 vesicle associated protein8.5e-0741.67Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG
        MQAQ+ AP DM+CKDKFL+Q  I              F+K+ G+ ++E KL  T V+P    SP  E  +EG
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG

AT3G60600.2 vesicle associated protein8.5e-0741.67Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG
        MQAQ+ AP DM+CKDKFL+Q  I              F+K+ G+ ++E KL  T V+P    SP  E  +EG
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG

AT3G60600.3 vesicle associated protein8.5e-0741.67Show/hide
Query:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG
        MQAQ+ AP DM+CKDKFL+Q  I              F+K+ G+ ++E KL  T V+P    SP  E  +EG
Subjt:  MQAQEMAPPDMKCKDKFLIQSTI--------------FAKKGGNYIDEKKLVTTLVSP--SSSPTDEAMKEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCACAAGAGATGGCTCCACCTGATATGAAATGCAAAGACAAGTTCTTAATCCAAAGCACAATATTTGCAAAAAAGGGTGGCAATTACATAGATGAAAAGAAGCT
GGTTACAACCCTTGTTAGTCCATCCAGTTCCCCAACTGATGAAGCAATGAAGGAGGGGATAGCTCTTGGAGTTTCAGACCCAATTAATTATAAGTGTGTTGAAGAGTTGA
AGTTAAAGATCAATGAACTTGAATTAAAGCTCCATGAGGTTATTCTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCACAAGAGATGGCTCCACCTGATATGAAATGCAAAGACAAGTTCTTAATCCAAAGCACAATATTTGCAAAAAAGGGTGGCAATTACATAGATGAAAAGAAGCT
GGTTACAACCCTTGTTAGTCCATCCAGTTCCCCAACTGATGAAGCAATGAAGGAGGGGATAGCTCTTGGAGTTTCAGACCCAATTAATTATAAGTGTGTTGAAGAGTTGA
AGTTAAAGATCAATGAACTTGAATTAAAGCTCCATGAGGTTATTCTTTCATAA
Protein sequenceShow/hide protein sequence
MQAQEMAPPDMKCKDKFLIQSTIFAKKGGNYIDEKKLVTTLVSPSSSPTDEAMKEGIALGVSDPINYKCVEELKLKINELELKLHEVILS