CuGenDBv2

Gene ID	Tan0011463
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ribosomal protein S21
Genome location	LG04:82849392..82849833
RNA-Seq Expression	Tan0011463
Synteny	Tan0011463
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573697.1 hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]

4.0e-29

79.61

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Query:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL
        MNSLARNISCSIRSSIH T S LH  QQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+IL
Subjt:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL

Query:  IKK
        IKK
Subjt:  IKK

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-30

77.88

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Query:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI
        MNSL+RN+SCSIRSS+HT    HLHYQQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+I
Subjt:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI

Query:  LIKK
        LIKK
Subjt:  LIKK

XP_022151802.1 uncharacterized protein LOC111019699 [Momordica charantia]

1.8e-29

75.93

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Query:  MNSLARNISCSIRSSIHTTDS-----HLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIHTTDS     +LH QQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHTTDS-----HLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKSILIKK
        LK+ILIKK
Subjt:  LKSILIKK

XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]

2.8e-30

77.88

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Query:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI
        MNSL+RN+SCSIRSS+HT    HLHYQQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+I
Subjt:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI

Query:  LIKK
        LIKK
Subjt:  LIKK

XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]

3.6e-30

77.88

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Query:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI
        MNSL+RN+SCSIRSS+HT    HLHYQQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+I
Subjt:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI

Query:  LIKK
        LIKK
Subjt:  LIKK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DEG8 uncharacterized protein LOC111019699

8.7e-30

75.93

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Query:  MNSLARNISCSIRSSIHTTDS-----HLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIHTTDS     +LH QQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHTTDS-----HLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKSILIKK
        LK+ILIKK
Subjt:  LKSILIKK

A0A6J1F3V2 uncharacterized protein LOC111441929

1.3e-30

77.88

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Query:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI
        MNSL+RN+SCSIRSS+HT    HLHYQQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+I
Subjt:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI

Query:  LIKK
        LIKK
Subjt:  LIKK

A0A6J1G018 uncharacterized protein LOC111449463

1.9e-29

79.61

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Query:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL
        MNSLARNISCSIRSSIH T S LH  QQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+IL
Subjt:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL

Query:  IKK
        IKK
Subjt:  IKK

A0A6J1HQF3 uncharacterized protein LOC111466431

1.9e-29

79.61

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Query:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL
        MNSLARNISCSIRSSIH T S LH  QQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+IL
Subjt:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL

Query:  IKK
        IKK
Subjt:  IKK

A0A6J1J5L6 uncharacterized protein LOC111481507

1.7e-30

77.88

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Query:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI
        MNSL+RN+SCSIRSS+HT    HLHYQQQQWRGIRVKVLNGNLER               RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+I
Subjt:  MNSLARNISCSIRSSIHTTD-SHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSI

Query:  LIKK
        LIKK
Subjt:  LIKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G26360.1 Ribosomal protein S21 family protein

3.5e-15

50.49

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Query:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL
        MN++A+ ++  +      T   L+ Q QQ RGIRVKV + +L++               RLIK  QTHHIKNSEK+VLARKNLER+I+S D ARKL+SIL
Subjt:  MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLER---------------RLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSIL

Query:  IKK
        IKK
Subjt:  IKK

Sequences

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CDS sequence

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ATGAACTCGTTGGCGCGGAACATATCCTGCTCCATCAGGTCTTCGATTCACACCACTGACTCGCACCTTCATTATCAGCAGCAGCAATGGAGGGGGATCCGAGTAAAGGT
ACTGAACGGGAATTTAGAGCGGCGGCTGATTAAGCGCGAACAGACGCATCATATCAAGAATTCCGAGAAACGAGTTTTGGCCCGTAAGAATTTGGAGCGCAAAATTCGAT
CGCAGGACCTCGCTCGCAAGCTCAAATCCATCCTTATAAAGAAATGGCCTGATCATACCGTTCTTCTAGCTTTGTTGATAAGTTGCTTGCTTATTTTTAGCGATTAG

mRNA sequence

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Protein sequence

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MNSLARNISCSIRSSIHTTDSHLHYQQQQWRGIRVKVLNGNLERRLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSILIKKWPDHTVLLALLISCLLIFSD

Tan0011463 (gene) of Snake gourd v1 genome