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Tan0011488 (gene) of Snake gourd v1 genome

Gene IDTan0011488
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncentromere protein V-like
Genome locationLG01:52626433..52630080
RNA-Seq ExpressionTan0011488
SyntenyTan0011488
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599075.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]1.4e-7591.03Show/hide
Query:  TKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPR
        TK  K V+SS+M+SELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPR
Subjt:  TKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPR

Query:  SNPDGVAITFKCVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        SNPDGVAITFKCVDPGTLTHVEIRQFDG NW+ASY HTGIASFSK
Subjt:  SNPDGVAITFKCVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

KAG7030011.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7591.03Show/hide
Query:  TKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPR
        TK  K V+SS+M+SELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPR
Subjt:  TKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPR

Query:  SNPDGVAITFKCVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        SNPDGVAITFKCVDPGTLTHVEIRQFDG NW+ASY HTGIASFSK
Subjt:  SNPDGVAITFKCVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

XP_022946627.1 centromere protein V-like [Cucurbita moschata]1.1e-7294.03Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTLTHVEIRQFDG NW+ASY HTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

XP_022999779.1 centromere protein V-like [Cucurbita maxima]2.0e-7294.03Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTL +VEIRQFDG NW+ASY HTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

XP_023546052.1 centromere protein V [Cucurbita pepo subsp. pepo]3.0e-7394.78Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SELV HNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTLTHVEIRQFDG NW+ASY HTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

TrEMBL top hitse value%identityAlignment
A0A1S3CMD8 centromere protein V isoform X22.3e-7187.94Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCKKVRWRVEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSKSKVENTS
        CVDPGTLTHVE+RQFDG NW+ASYDHTGIASFSK      S
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSKSKVENTS

A0A1S3CMF5 centromere protein V isoform X52.3e-7191.79Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCKKVRWRVEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTLTHVE+RQFDG NW+ASYDHTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

A0A5D3CJK9 Centromere protein V isoform X12.3e-7191.79Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCKKVRWRVEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTLTHVE+RQFDG NW+ASYDHTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

A0A6J1G4E1 centromere protein V-like5.5e-7394.03Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SELVVHNGGCHCK VRWRVEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTLTHVEIRQFDG NW+ASY HTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

A0A6J1KE30 centromere protein V-like9.5e-7394.03Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M+SELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CVDPGTL +VEIRQFDG NW+ASY HTGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 13.6e-2140.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WDASYDHTGI
        GT+  V I +  G +   +A+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WDASYDHTGI

A0A0U1RRI6 Centromere protein V-like protein 33.6e-2140.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WDASYDHTGI
        GT+  V I +  G +   +A+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WDASYDHTGI

P0DPI3 Centromere protein V-like protein 23.6e-2140.16Show/hide
Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WDASYDHTGI
        GT+  V I +  G +   +A+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WDASYDHTGI

Q7Z7K6 Centromere protein V8.3e-3446.71Show/hide
Query:  RKRKPSTKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGIT
        R++  S    K ++ +     LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP+ RFKLL  +E+ I+TYTF TH A+HTFCK CG+ 
Subjt:  RKRKPSTKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGIT

Query:  SFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGRNWD-ASYDHTGIASFSK
        SFY PRSNP G  I   C+D GT+  +   +F+G +W+ A  +H  I + SK
Subjt:  SFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGRNWD-ASYDHTGIASFSK

Q9CXS4 Centromere protein V8.3e-3447.37Show/hide
Query:  RKRKPSTKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGIT
        R+R       K ++ +     LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP+ RFKLL  +E+ I+TYTF TH A+HTFCK CG+ 
Subjt:  RKRKPSTKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGIT

Query:  SFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGRNWD-ASYDHTGIASFSK
        SFY PRSNP G  I   C+D GT+  V   +F+G +W+ A  +H  I + SK
Subjt:  SFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGRNWD-ASYDHTGIASFSK

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases1.5e-5970.9Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCSDC MR N HFIVPS  F+LL DS++FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CV  GTL H+E++ +DG+NW+ S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK

AT5G16940.2 carbon-sulfur lyases1.5e-5970.9Show/hide
Query:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCSDC MR N HFIVPS  F+LL DS++FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK
        CV  GTL H+E++ +DG+NW+ S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGTCGAAAACGAAAACCTTCCACGAAGGGACCAAAACGGGTGGTTTCTTCTGTAATGAATTCTGAGTTGGTTGTGCATAACGGTGGATGCCACTGCAAGAAAGT
AAGATGGCGAGTCGAAGCACCTGCCAGTGTTGTAGCTTGGGATTGCAATTGTTCTGATTGCTTCATGAGGGCCAATACACATTTTATCGTACCTTCAGAACGATTTAAGC
TTTTAGGAGATTCCGAGAACTTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAACATACCTTTTGCAAAGTTTGTGGCATTACCTCATTTTACCATCCACGCTCA
AATCCAGATGGAGTTGCAATTACTTTCAAATGTGTAGATCCTGGAACATTGACTCATGTTGAGATTAGGCAGTTTGATGGGAGGAACTGGGATGCCTCTTATGATCACAC
AGGTATTGCTTCATTCTCAAAGTCAAAGGTTGAGAATACAAGTTAG
mRNA sequenceShow/hide mRNA sequence
GAAAGGGCCGTCAGCTGCCGCAACTGGCTCTCTGGTTCACAGTCGCGCACGCCCACAGGCCACAGGTTGAGGAGATGTTAACATTACAAATACTGAGCCCAACTCGAGGA
AATTACATTCTTTCTGAACACTTCGATGATTAGTCGAAAACGAAAACCTTCCACGAAGGGACCAAAACGGGTGGTTTCTTCTGTAATGAATTCTGAGTTGGTTGTGCATA
ACGGTGGATGCCACTGCAAGAAAGTAAGATGGCGAGTCGAAGCACCTGCCAGTGTTGTAGCTTGGGATTGCAATTGTTCTGATTGCTTCATGAGGGCCAATACACATTTT
ATCGTACCTTCAGAACGATTTAAGCTTTTAGGAGATTCCGAGAACTTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAACATACCTTTTGCAAAGTTTGTGGCAT
TACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCAATTACTTTCAAATGTGTAGATCCTGGAACATTGACTCATGTTGAGATTAGGCAGTTTGATGGGAGGA
ACTGGGATGCCTCTTATGATCACACAGGTATTGCTTCATTCTCAAAGTCAAAGGTTGAGAATACAAGTTAGAATGCATTTTGATATTTGCCGTCTTTATGACTGTTGACA
ACACTTGTGAGTGAACTTGTTTAGACTTGTATTTGTAGCTGAAGCATATATCTCGAGTCCTGACTGCAGTCACCCCGTATTTCTAGCGAATCTATCTTCTCTCCTACTCA
TCTATTATCCCATTTGACCACTGTATTTGTAGTTGAAGCATATATCTCGAGTCTCGATGCAGTCACCCCCGTATTTCTACCAAATCTATCTCCTCTCCCACTCTTCTGTT
ATCCCATTTGACCACTGCATTTCCCTCTTTTGCTGCCTCATCCCCCTCAATCCATCTCCTCTCCAAAAATGGGATATTAGTGAAAATAATGAACACCTGAGACTCAAACC
AAAACCAAAAATGTTGTGATAAACCGAGGGGGTTGGTTTAGTTTGTAGGTTTGGCCAAAACAAGACCTAGCACACCCCTAGGACGTACATTCATACGTTAAGATACTTTT
CTTCCTAGTTTGCTAGGAGTTTTCCTTTTTTGTCTTTATGGTTTGTTTTACACTGTCATTGTCATCCTCTTTGAGTCATTTGTAGGCTACCCTAAATATATTGTTGAGAT
AATAAATTGAGGTATTCTTAAACATTGTTAAGTCTTTATGCAATTATAGTGTAGTTTTGTATTGTCCTTACATATCCATGTTTTGCTTAGTCACCAAACTTGTGAAGTTT
GACAAACCGCGAATAGGGAATGTGTGTCTTTATCTCTTGGTTATTAATCAAAGGAAATCTAAATTCTAACTCTATCCTTTGAGTTGATACCTTATTGTTTGGAG
Protein sequenceShow/hide protein sequence
MISRKRKPSTKGPKRVVSSVMNSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRS
NPDGVAITFKCVDPGTLTHVEIRQFDGRNWDASYDHTGIASFSKSKVENTS