; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011500 (gene) of Snake gourd v1 genome

Gene IDTan0011500
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationLG05:77085495..77087250
RNA-Seq ExpressionTan0011500
SyntenyTan0011500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXF54227.1 COR1 [Cucurbita pepo]3.5e-9988.21Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD  ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+L
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFS AG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]1.3e-9887.34Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+GI+     KK+ RGLSAVCYAMP+  R LQWISTISSVVL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SF+RAFDQNSIVA+VAV C+TAVSFL VI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]2.8e-10187.77Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SF+RAFDQNSIVA+VAV C+TAVSFL VI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

XP_023542165.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]2.7e-9988.21Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        +VC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ SIC NP+RF  GSD  ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+L
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]4.4e-10288.21Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PSL +SKLSVPLSLRSSPPNAKLS +PAAKQ+SICYNPLRFAVGS+GI+TAAITKKR RGLSA+CYAMP+ AR LQWISTISS VL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFAL APASV+SWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SFRRAFDQNSIVA+VAV C TAVSFLLVI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein6.4e-9987.34Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+GI+     KK+ RGLSAVCYAMP+  R LQWISTISSVVL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SF+RAFDQNSIVA+VAV C+TAVSFL VI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like1.4e-10187.77Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SF+RAFDQNSIVA+VAV C+TAVSFL VI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

A0A345BTH0 COR11.7e-9988.21Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD  ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+L
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFS AG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 21.4e-10187.77Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVL
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SF+RAFDQNSIVA+VAV C+TAVSFL VI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X26.4e-9988.21Show/hide
Query:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL
        MVC  LSSAIS+++P L KSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD  ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+L
Subjt:  MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISLLIAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAG

Query:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI
        SFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Subjt:  SFRRAFDQNSIVASVAVTCVTAVSFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic7.4e-6057.78Show/hide
Query:  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--AAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLAR
        SLC S   + +SL    P   L L P     S        +C+NPLR +      +T  A   K+R+RG S VCYA P L+  NLQWISTIS V LM AR
Subjt:  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--AAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLAR

Query:  GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRR
        GTGI KSF+VPLFALQAP  ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG+ ++
Subjt:  GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRR

Query:  AFDQNSIVASVAVTCVTAVSFLLVI
        AFDQNS++A+VA+  VT VSFL +I
Subjt:  AFDQNSIVASVAVTCVTAVSFLLVI

O23164 Cold-regulated 413 plasma membrane protein 49.8e-1231.58Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVAS
        +I L+IA YL  +H   +G F+ +F Q + +++
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVAS

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic6.2e-5954.11Show/hide
Query:  VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSDGISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSV
        +C S S  +S++       K  + L LRS P +    L+   + TS +C+NPLR +      +T +  + K+R+RG S VCYA P++A +LQWISTIS +
Subjt:  VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSDGISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
         LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVASVAVTCVTAVSFLLVI
        AGS  +A+++ S++A+VA+  VT VS LL++
Subjt:  AGSFRRAFDQNSIVASVAVTCVTAVSFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 24.4e-1232.28Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ
        +ISL I  YL  +H   +G FR +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 12.7e-0931.43Show/hide
Query:  LQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G 
Subjt:  LQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVASVAVTCV
         I L I  YL  +H   +G FR AF + N I  +V + C+
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVASVAVTCV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 25.2e-6157.78Show/hide
Query:  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--AAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLAR
        SLC S   + +SL    P   L L P     S        +C+NPLR +      +T  A   K+R+RG S VCYA P L+  NLQWISTIS V LM AR
Subjt:  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--AAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLAR

Query:  GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRR
        GTGI KSF+VPLFALQAP  ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG+ ++
Subjt:  GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRR

Query:  AFDQNSIVASVAVTCVTAVSFLLVI
        AFDQNS++A+VA+  VT VSFL +I
Subjt:  AFDQNSIVASVAVTCVTAVSFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 21.2e-5767.66Show/hide
Query:  TAAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K+R+RG S VCYA P L+  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI
        LVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG+ ++AFDQNS++A+VA+  VT VSFL +I
Subjt:  LVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 14.4e-6054.11Show/hide
Query:  VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSDGISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSV
        +C S S  +S++       K  + L LRS P +    L+   + TS +C+NPLR +      +T +  + K+R+RG S VCYA P++A +LQWISTIS +
Subjt:  VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSDGISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSV

Query:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR
         LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSR

Query:  AGSFRRAFDQNSIVASVAVTCVTAVSFLLVI
        AGS  +A+++ S++A+VA+  VT VS LL++
Subjt:  AGSFRRAFDQNSIVASVAVTCVTAVSFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 23.1e-1332.28Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ
        +ISL I  YL  +H   +G FR +F Q
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family6.9e-1331.58Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVAS
        +I L+IA YL  +H   +G F+ +F Q + +++
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGCATCTCTGTCTTCTGCTATTTCAATTTACACTCCCTCTCTCTGCAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCT
CTCCTTGAATCCTGCCGCTAAACAGACTTCGATTTGTTATAATCCGCTCAGGTTTGCTGTCGGTAGCGACGGGATTTCGACGGCGGCGATTACCAAGAAGAGGAGACGTG
GTTTAAGTGCTGTTTGTTACGCTATGCCTCTTACTGCCCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGAACTGGGATCCAGAAG
TCATTTATCGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTCATCTCGTGGATTAAAGGAGAATATGGCTTTTGGAGCGCATTTTTGGCACTTCTCGTTCGGCTCTT
CTTCTTCATCCCCGGTGAACTGGAGATACCATTCATATCATTACTTTTGGTGATTGTAGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCT
CACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCATCAGTAGCAGTCACTTGTGTC
ACTGCTGTCTCATTCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTGCATCTCTGTCTTCTGCTATTTCAATTTACACTCCCTCTCTCTGCAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCT
CTCCTTGAATCCTGCCGCTAAACAGACTTCGATTTGTTATAATCCGCTCAGGTTTGCTGTCGGTAGCGACGGGATTTCGACGGCGGCGATTACCAAGAAGAGGAGACGTG
GTTTAAGTGCTGTTTGTTACGCTATGCCTCTTACTGCCCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGAACTGGGATCCAGAAG
TCATTTATCGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTCATCTCGTGGATTAAAGGAGAATATGGCTTTTGGAGCGCATTTTTGGCACTTCTCGTTCGGCTCTT
CTTCTTCATCCCCGGTGAACTGGAGATACCATTCATATCATTACTTTTGGTGATTGTAGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCT
CACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCATCAGTAGCAGTCACTTGTGTC
ACTGCTGTCTCATTCCTGCTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQK
SFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCV
TAVSFLLVI