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Tan0011512 (gene) of Snake gourd v1 genome

Gene IDTan0011512
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG05:77379250..77381262
RNA-Seq ExpressionTan0011512
SyntenyTan0011512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583907.1 hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia]8.4e-6478.74Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLDHPSQRDA  PPSPRR    LP+E  SSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
           S+SN PN IDCG NRPVDDIQ+L+QLLGLGDS +EQELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

KAG7019524.1 hypothetical protein SDJN02_18485 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-6478.74Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLK D+PSQRDA  PPSPRR  P LP+E SSSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
           S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

XP_022927255.1 uncharacterized protein LOC111434155 [Cucurbita moschata]1.3e-6478.98Show/hide
Query:  PPPAPPWLP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP
        PPP PP  P  SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPSPRR  P LP+E SSSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS    
Subjt:  PPPAPPWLP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP

Query:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
         S   S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

XP_023001462.1 uncharacterized protein LOC111495590 [Cucurbita maxima]5.4e-6377.59Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPSPRR  P LP+E SSSSS EESLS+PMYLHL QTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
           S+SN PN IDCG+NRPVDDIQ+L+QLLG GDS +E+ELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

XP_023519908.1 uncharacterized protein LOC111783234 [Cucurbita pepo subsp. pepo]4.9e-6478.16Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPSPRR  P LP+E SSSSSAEES+S+PMYLHLPQTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
           S+SN PN IDCG++RPVDDIQ+L+QLLGLGDS +EQELGA+SGCNGCEGCESGFYSKIVGLKGPK GKE E
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

TrEMBL top hitse value%identityAlignment
A0A0A0LUG6 Uncharacterized protein7.6e-6376.44Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        P PAPP L SLHSNFFSSLKQVEKRLKLDH SQRD  HP      PPPLP+ T+SSS+ E+SLS+PMYLH PQTNTSS LQESS+ PLEFLS+S QSP S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
         P S+SN P PID G+NR VDDIQ+LIQLLGL DSCDE+E GAK+GCNGCEGCESGFYSKIVGLKGPK  KEVE
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

A0A1S3B9V1 uncharacterized protein LOC1034875964.2e-6174.01Show/hide
Query:  MQPPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS
        MQPPP PP   SLHS+FFSSLKQVEKRLKLDH SQRD  HP      PPP+P++T++SSS EE  LS+PMYLH PQTNTSS LQESS+PPLEFLSN   S
Subjt:  MQPPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS

Query:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
        P S P S SN PN ID G+NR +DDIQ+LIQLLGL DSCDE+ELG K GCNGCEGCESGFYSKIVGLKGPK  KEVE
Subjt:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

A0A5A7UHE6 Uncharacterized protein4.2e-6174.01Show/hide
Query:  MQPPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS
        MQPPP PP   SLHS+FFSSLKQVEKRLKLDH SQRD  HP      PPP+P++T++SSS EE  LS+PMYLH PQTNTSS LQESS+PPLEFLSN   S
Subjt:  MQPPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEES-LSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQS

Query:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
        P S P S SN PN ID G+NR +DDIQ+LIQLLGL DSCDE+ELG K GCNGCEGCESGFYSKIVGLKGPK  KEVE
Subjt:  PLSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

A0A6J1END4 uncharacterized protein LOC1114341556.2e-6578.98Show/hide
Query:  PPPAPPWLP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP
        PPP PP  P  SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPSPRR  P LP+E SSSSS EESLS+PMYLHLPQTNT+S+LQESSEPP EFLSNS    
Subjt:  PPPAPPWLP--SLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSP

Query:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
         S   S+SN PN IDCG+NRPVDDIQ+L+QLLGLGDS +EQELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  LSPPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

A0A6J1KGL6 uncharacterized protein LOC1114955902.6e-6377.59Show/hide
Query:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS
        PPP PP   SLHS+FFSSLKQVEKRLKLD+PSQRDA  PPSPRR  P LP+E SSSSS EESLS+PMYLHL QTNT+S+LQESSEPP EFLSNS     S
Subjt:  PPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLS

Query:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE
           S+SN PN IDCG+NRPVDDIQ+L+QLLG GDS +E+ELGA+SGCNGCEGCESGFYSKIVGLKGPK GKEVE
Subjt:  PPISDSNHPNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCACCTCCGGCGCCGCCGTGGCTTCCATCTCTTCACTCGAATTTCTTTTCGTCTCTTAAACAGGTCGAAAAACGCCTCAAATTAGACCATCCATCGCAACGCGA
CGCTTTTCATCCACCATCACCTCGACGAAATCCACCGCCATTGCCAATAGAAACCAGTTCTTCTTCATCAGCCGAAGAGTCACTAAGCTCTCCAATGTATCTGCATTTGC
CCCAAACCAACACAAGCTCTGCCCTACAAGAAAGCAGCGAACCGCCACTCGAATTCCTCTCAAATTCCTTACAATCTCCACTATCCCCTCCGATATCAGACTCGAATCAT
CCGAATCCCATCGATTGTGGAGAAAATCGGCCTGTAGATGACATTCAACAGCTGATTCAACTCCTAGGGTTAGGAGATTCGTGTGACGAACAGGAATTGGGAGCTAAGAG
TGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGTCCCAAATTTGGGAAGGAAGTGGAGGTTAAATGGATTGATTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGCGCCAAATTTTCTTTGGCAGCCGCAGCTTTGCCTCGAGACGTTGCCGCAACTTCATCGGTGAAAAAAAATGCAGCCACCTCCGGCGCCGCCGTGGCTTCCATCTC
TTCACTCGAATTTCTTTTCGTCTCTTAAACAGGTCGAAAAACGCCTCAAATTAGACCATCCATCGCAACGCGACGCTTTTCATCCACCATCACCTCGACGAAATCCACCG
CCATTGCCAATAGAAACCAGTTCTTCTTCATCAGCCGAAGAGTCACTAAGCTCTCCAATGTATCTGCATTTGCCCCAAACCAACACAAGCTCTGCCCTACAAGAAAGCAG
CGAACCGCCACTCGAATTCCTCTCAAATTCCTTACAATCTCCACTATCCCCTCCGATATCAGACTCGAATCATCCGAATCCCATCGATTGTGGAGAAAATCGGCCTGTAG
ATGACATTCAACAGCTGATTCAACTCCTAGGGTTAGGAGATTCGTGTGACGAACAGGAATTGGGAGCTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGGTTT
TACAGTAAGATCGTTGGCTTAAAAGGTCCCAAATTTGGGAAGGAAGTGGAGGTTAAATGGATTGATTAAGTACTTTTTGAATGGTGACGGTGATGACGGTGAAGAAGAGA
GATTAGAGCCTCTTAGACTGGCATATTTGCTGCTGGGGAAAGCTGTTTTTGCTTCTAATGGCAGTGGTGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTTTAGAGGAT
TTCTTGCTGAATGATCCTCCTGCATAATAGGAAAATGGGATGGCATGGCTGAAAATTTCTGGATTTCAACCTGGACATGAACCAGCAACACTGGAGCTCAAGCAAAATCA
CTTAAAACTATGGTAATGGGTCTCAAATCTTTAACCAAAAGCATGTTAGCTAGTTGCTAAAGCAGAGGAACATGTGATTTTGGTTTGGTCCAAGGGTGGCTCTGTGAAAG
ATTTAATAAATTGAAATCCTCAATATCTCTTGAAGCTAGTAATATCCAAGAGAGAGAAAGAAAATACACACATACATATATATATATATAGTTTGAATTTAACTGATTAG
TGGAATTTGTAAGCTGAATAAAAGATGTTCAGAACATTTTGGTGGCCATTTTTGTTAATCCTCTCTTTGTAGGTTGGGATGTATAGAACTCAT
Protein sequenceShow/hide protein sequence
MQPPPAPPWLPSLHSNFFSSLKQVEKRLKLDHPSQRDAFHPPSPRRNPPPLPIETSSSSSAEESLSSPMYLHLPQTNTSSALQESSEPPLEFLSNSLQSPLSPPISDSNH
PNPIDCGENRPVDDIQQLIQLLGLGDSCDEQELGAKSGCNGCEGCESGFYSKIVGLKGPKFGKEVEVKWID