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Tan0011513 (gene) of Snake gourd v1 genome

Gene IDTan0011513
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC3H1-type domain-containing protein
Genome locationLG07:12297874..12298918
RNA-Seq ExpressionTan0011513
SyntenyTan0011513
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035874.1 hypothetical protein SDJN02_02673, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1970.93Show/hide
Query:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES
        MDPS+SKIDPSEF+P   ELE LQKE+E K +KIKEMK EIEA K+ L EKK S +EME LK LCE++NS RKEY ETL KQTRES
Subjt:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES

KGN48117.1 hypothetical protein Csa_003321 [Cucumis sativus]1.1e-1360Show/hide
Query:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEK----KVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES
        MDPSNSKIDPSEFE   SEL+ L++ELEEK +K++EMK +IE  K+ L +K    K S KEME  K LC KY S RKEYNE   K+ RES
Subjt:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEK----KVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES

XP_018839726.1 uncharacterized protein LOC109005317 isoform X1 [Juglans regia]2.4e-0554.93Show/hide
Query:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE
        ASELEAL+KELE+K  KI+E+K +IEATK  + L +KKV  ++ME LK L +KYNS R+E+   LA ++R+
Subjt:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE

XP_022958532.1 uncharacterized protein LOC111459736 [Cucurbita moschata]6.4e-1469.33Show/hide
Query:  EFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES
        EF+P  SELE LQKE+E K +KIKEMK EIE  K+ L EKK S +EME LK LCE+YNS RKEY ETL KQTRES
Subjt:  EFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES

XP_035546317.1 uncharacterized protein LOC118348522 [Juglans regia]2.4e-0554.93Show/hide
Query:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE
        ASELEAL+KELE+K  KI+E+K +IEATK  + L +KKV  ++ME LK L +KYNS R+E+   LA ++R+
Subjt:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE

TrEMBL top hitse value%identityAlignment
A0A0A0KIA6 Uncharacterized protein5.3e-1460Show/hide
Query:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEK----KVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES
        MDPSNSKIDPSEFE   SEL+ L++ELEEK +K++EMK +IE  K+ L +K    K S KEME  K LC KY S RKEYNE   K+ RES
Subjt:  MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEK----KVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES

A0A2I4G744 uncharacterized protein LOC109005317 isoform X11.2e-0554.93Show/hide
Query:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE
        ASELEAL+KELE+K  KI+E+K +IEATK  + L +KKV  ++ME LK L +KYNS R+E+   LA ++R+
Subjt:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE

A0A6J1H234 uncharacterized protein LOC1114597363.1e-1469.33Show/hide
Query:  EFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES
        EF+P  SELE LQKE+E K +KIKEMK EIE  K+ L EKK S +EME LK LCE+YNS RKEY ETL KQTRES
Subjt:  EFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES

A0A6P9EFT4 uncharacterized protein LOC108996796 isoform X21.2e-0554.93Show/hide
Query:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE
        ASELEAL+KELE+K  KI+E+K +IEATK  + L +KKV  ++ME LK L +KYNS R+E+   LA ++R+
Subjt:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE

A0A6P9EUP0 uncharacterized protein LOC1183485221.2e-0554.93Show/hide
Query:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE
        ASELEAL+KELE+K  KI+E+K +IEATK  + L +KKV  ++ME LK L +KYNS R+E+   LA ++R+
Subjt:  ASELEALQKELEEKKEKIKEMKTEIEATK--ISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGCAATTCAAAAATTGACCCATCAGAGTTCGAGCCTACAGCTTCAGAGCTGGAAGCCTTGCAGAAAGAGCTCGAGGAGAAGAAAGAGAAAATAAAAGAAAT
GAAGACAGAGATCGAAGCTACAAAAATTAGTTTGGTGGAGAAGAAAGTTTCAAATAAAGAAATGGAATGTTTGAAGGAATTGTGTGAAAAATACAACAGCTCGAGAAAGG
AATACAATGAAACATTGGCCAAACAGACAAGGGAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGCAATTCAAAAATTGACCCATCAGAGTTCGAGCCTACAGCTTCAGAGCTGGAAGCCTTGCAGAAAGAGCTCGAGGAGAAGAAAGAGAAAATAAAAGAAAT
GAAGACAGAGATCGAAGCTACAAAAATTAGTTTGGTGGAGAAGAAAGTTTCAAATAAAGAAATGGAATGTTTGAAGGAATTGTGTGAAAAATACAACAGCTCGAGAAAGG
AATACAATGAAACATTGGCCAAACAGACAAGGGAATCTTAG
Protein sequenceShow/hide protein sequence
MDPSNSKIDPSEFEPTASELEALQKELEEKKEKIKEMKTEIEATKISLVEKKVSNKEMECLKELCEKYNSSRKEYNETLAKQTRES