CuGenDBv2

Gene ID	Tan0011524
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RSN1_7TM domain-containing protein
Genome location	LG03:76007415..76008021
RNA-Seq Expression	Tan0011524
Synteny	Tan0011524
Gene Ontology terms	GO:0034220 - ion transmembrane transport (biological process) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025640.1 hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa]

1.8e-55

77.94

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHHI A KSNLVDS  ET+  GF+DNNGLPLCPKPRRL P +P+FL PLRCAH IHSQSSGD+R+ +LNII GKNVE RDC  S CYPSCYSGSPPGRTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV D+YFLHQME+ S FSRT LSDKF+LTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

KAG6594753.1 hypothetical protein SDJN03_11306, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-49

80.33

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHHI AAKSNLVDS PETDH      N  PLCPKPRRLRP +P+FLAP RCAHRIHSQSS D R+ ILNIIAGK VEGRDCLC NCYPSCYSGSPPGRT 
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRT
        NPLVQDVYFLHQ+E+ SPFSRT
Subjt:  NPLVQDVYFLHQMELHSPFSRT

XP_022133306.1 uncharacterized protein LOC111005918 [Momordica charantia]

4.1e-55

80.88

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MH   A KSNLVDS PET++    + N LPLCPKPRR RPT+PNFL PLRCA RIHSQSSG+ R GILNIIAGKNVEGRDCLCSNCYPSCYSGSPP RTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV DVYFLHQMEL SPFS TKLS+KFSLTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

XP_031743884.1 uncharacterized protein LOC116404717 [Cucumis sativus]

1.5e-57

80.88

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHH  A KSNLVDS  ET+  GF+DNNGLPLCPKPRRL P +P+FLAPL CAH IHSQSSGD+R+ ILNII GKNVEGRDCL S CYPSCYSGSPPGRTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV D+YFLHQME+HSPFSRT LSDKF+LTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

XP_038881848.1 uncharacterized protein LOC120073212 [Benincasa hispida]

2.9e-61

83.82

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        M+HI A KSNLVDSG +TD LGF+DNN LPLCPKPRRL P +P+FLAPL CAH +HSQSSGD R+GILNIIAGK+VEGRDCLCS CYPSCYSGSPPGRTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV DVYFLHQME+HSPFSRT LSDKFSLTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHD1 Uncharacterized protein

7.3e-58

80.88

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHH  A KSNLVDS  ET+  GF+DNNGLPLCPKPRRL P +P+FLAPL CAH IHSQSSGD+R+ ILNII GKNVEGRDCL S CYPSCYSGSPPGRTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV D+YFLHQME+HSPFSRT LSDKF+LTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

A0A2C9WEC2 Uncharacterized protein

6.2e-41

65.19

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        M+H+   KSNLVDS  +T  LGFR NN  PLCPKPRRL PT+P F   L+C    HSQ   D RTGILN+I  K ++GR+ +CS C PSCYSGSPPGRT+
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASP
        NPLV DV+F+HQMEL SPF+RTKLSDKF  TSASP
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASP

A0A2I4FDA1 uncharacterized protein LOC108997710

5.6e-42

64.44

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHH+A  KSNLVDSG ET++L  R NN  PLCPKPRRL   +P FL P RC+   HSQ + D R  ILNII+ KN +GR+ +C+ C PSC+ GSPPGRT 
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASP
        NPLV DV F+HQMEL SPF+RTKLSDKF  TSASP
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASP

A0A5D3CKV6 Uncharacterized protein

8.9e-56

77.94

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MHHI A KSNLVDS  ET+  GF+DNNGLPLCPKPRRL P +P+FL PLRCAH IHSQSSGD+R+ +LNII GKNVE RDC  S CYPSCYSGSPPGRTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV D+YFLHQME+ S FSRT LSDKF+LTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

A0A6J1BUP6 uncharacterized protein LOC111005918

2.0e-55

80.88

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Query:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE
        MH   A KSNLVDS PET++    + N LPLCPKPRR RPT+PNFL PLRCA RIHSQSSG+ R GILNIIAGKNVEGRDCLCSNCYPSCYSGSPP RTE
Subjt:  MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTE

Query:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT
        NPLV DVYFLHQMEL SPFS TKLS+KFSLTSASPT
Subjt:  NPLVQDVYFLHQMELHSPFSRTKLSDKFSLTSASPT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G68490.1 unknown protein

6.0e-04

38.37

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Query:  LCPKPRR--LRPTVPNFLAPLRC--AHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPS---CYSGSPPGRTENPLVQDVYF
        +CPKPRR  LR    +    LRC  +H++    S  A T IL+II  K+  G + +      S      GSPP R  NPL QD  F
Subjt:  LCPKPRR--LRPTVPNFLAPLRC--AHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPS---CYSGSPPGRTENPLVQDVYF

AT5G16110.1 unknown protein

6.8e-08

33.33

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Query:  LGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTG--ILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTENPLVQDVYF----LHQME
        +GF D   L +CPKPRR+     N + PLR      +    D++ G  +L II  K   G      +  P  + GSPP R  NPL QD  F    L+ + 
Subjt:  LGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTG--ILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTENPLVQDVYF----LHQME

Query:  LHSPFSRTKLSDKFSLTSAS
         +SPF +   +  F   S+S
Subjt:  LHSPFSRTKLSDKFSLTSAS

Sequences

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CDS sequence

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ATGCATCACATAGCAGCAGCTAAAAGCAATCTTGTTGATTCAGGCCCTGAAACAGACCATCTTGGCTTCAGAGACAACAATGGCCTCCCTCTCTGCCCCAAGCCCCGCCG
TCTCCGACCCACCGTCCCTAATTTCCTCGCCCCTCTTCGATGCGCCCACCGCATTCACAGCCAATCGAGCGGCGATGCTAGGACTGGAATCCTCAATATCATTGCGGGAA
AGAATGTTGAAGGGAGGGATTGTTTGTGTTCGAATTGCTACCCGTCGTGTTATTCGGGTTCTCCGCCGGGAAGAACAGAGAATCCGCTGGTTCAGGATGTGTATTTTCTT
CATCAAATGGAGCTTCATTCGCCATTTTCGAGGACCAAGCTCTCAGATAAGTTCAGTTTGACCTCTGCCTCCCCCACATGA

mRNA sequence

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Protein sequence

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MHHIAAAKSNLVDSGPETDHLGFRDNNGLPLCPKPRRLRPTVPNFLAPLRCAHRIHSQSSGDARTGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPGRTENPLVQDVYFL
HQMELHSPFSRTKLSDKFSLTSASPT

Tan0011524 (gene) of Snake gourd v1 genome