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Tan0011536 (gene) of Snake gourd v1 genome

Gene IDTan0011536
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L14, chloroplastic
Genome locationContig00124:267905..273096
RNA-Seq ExpressionTan0011536
SyntenyTan0011536
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000218 - Ribosomal protein L14P
IPR005745 - Ribosomal protein L14P, bacterial-type
IPR019972 - Ribosomal protein L14P, conserved site
IPR036853 - Ribosomal protein L14 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88831.1 ribosomal protein L14, partial [Lagenaria siceraria]6.8e-4098.88Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

AHM91247.1 ribosomal protein L14, partial [Lagenaria siceraria]6.8e-4098.88Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

YP_009752279.1 ribosomal protein L14 [Trichosanthes baviensis]3.1e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

YP_009753040.1 ribosomal protein L14 [Gerrardanthus macrorhizus]6.8e-4098.88Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

YP_009753656.1 ribosomal protein L14 [Trichosanthes wallichiana]6.8e-4098.88Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

TrEMBL top hitse value%identityAlignment
A0A6H0EQN5 50S ribosomal protein L14, chloroplastic1.5e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

A0A6H0ERD9 50S ribosomal protein L14, chloroplastic1.5e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

A0A6H0ERW9 50S ribosomal protein L14, chloroplastic1.5e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

A0A6M3RTV5 50S ribosomal protein L14, chloroplastic1.5e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

A0A6M3RVU0 50S ribosomal protein L14, chloroplastic1.5e-40100Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

SwissProt top hitse value%identityAlignment
A0A372 50S ribosomal protein L14, chloroplastic3.8e-4194.38Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIK+AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

B1A971 50S ribosomal protein L14, chloroplastic3.8e-4195.51Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIK+AVPNTPLERSEVIRAVIVRTCKELKR NGMIIRYDDNAAVVIDQEGNPKGTRIFGAI REL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

Q1KXS2 50S ribosomal protein L14, chloroplastic3.8e-4192.22Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQY
        MCIRIIGASNRRYAHIGDVIVAVIK AVPN PLERSEV+RAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q+
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQY

Q49KW2 50S ribosomal protein L14, chloroplastic2.2e-4193.26Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGD+IVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR+NGMIIRYDDNAAVVIDQEGNPKGTR+FGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

Q8WKP4 50S ribosomal protein L14, chloroplastic9.0e-4398.88Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIAREL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein1.5e-0838.36Show/hide
Query:  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARE
        A +GD+++A +KK  P+    R +V+ AVIVR  K  +R++G+ + ++DNA V+++ +G  KG+ I G I +E
Subjt:  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARE

AT2G33370.1 Ribosomal protein L14p/L23e family protein1.5e-0838.36Show/hide
Query:  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARE
        A +GD+++A +KK  P+    R +V+ AVIVR  K  +R++G+ + ++DNA V+++ +G  KG+ I G I +E
Subjt:  AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARE

AT5G46160.1 Ribosomal protein L14p/L23e family protein4.9e-1233.64Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPKGTRIFGAIARELKQYTRR
        MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  EL++    
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPKGTRIFGAIARELKQYTRR

Query:  DIFFISQ
         I  ++Q
Subjt:  DIFFISQ

AT5G46160.2 Ribosomal protein L14p/L23e family protein4.9e-1233.64Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPKGTRIFGAIARELKQYTRR
        MCI+ +    ++ A +GD IVA +K+A+PN  +++  V+  V+VR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  EL++    
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQ-------EGNPKGTRIFGAIARELKQYTRR

Query:  DIFFISQ
         I  ++Q
Subjt:  DIFFISQ

ATCG00780.1 ribosomal protein L142.3e-4192.13Show/hide
Query:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ
        MCIRIIGASNRRYAHIGDVIVAVIK+A+PNTPLERSEVIRAVIVRTCKELKR NG IIRYDDNAAVVIDQEGNPKGTR+FGAI REL+Q
Subjt:  MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGA
AGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATC
CAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAAACAATACACACGTCGTGATATTTTCTTTATTTCACAATTGAATCAATTTAAAAAAGACCTAAAGTTA
GGGATTTCTCAATCGGTAATCTTCCGTCATTATATATTGAACAGAAGCAAAAGCCTCAGTAACGGTCGGACGATAGTCAAAAGTCATAGCAAACCCCGTAGCTACTTGTA
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGA
AGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATC
CAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAAACAATACACACGTCGTGATATTTTCTTTATTTCACAATTGAATCAATTTAAAAAAGACCTAAAGTTA
GGGATTTCTCAATCGGTAATCTTCCGTCATTATATATTGAACAGAAGCAAAAGCCTCAGTAACGGTCGGACGATAGTCAAAAGTCATAGCAAACCCCGTAGCTACTTGTA
CTAA
Protein sequenceShow/hide protein sequence
MCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQYTRRDIFFISQLNQFKKDLKL
GISQSVIFRHYILNRSKSLSNGRTIVKSHSKPRSYLY