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Tan0011537 (gene) of Snake gourd v1 genome

Gene IDTan0011537
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsuccinate dehydrogenase assembly factor 2, mitochondrial
Genome locationLG11:49767661..49799662
RNA-Seq ExpressionTan0011537
SyntenyTan0011537
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsIPR005631 - Flavinator of succinate dehydrogenase
IPR036714 - Flavinator of succinate dehydrogenase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032455.1 Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-7072.64Show/hide
Query:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        MATFRRA++KAHQVL L+ +ST FRSKS+P+L  A+  LENLQ RL NH QNQ G FF+FRCSSTT NPL  DIDLSNEESKRRL NRLLYRSKQRGFLE
Subjt:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDLVLGKWVEDHI+SLDADGI+ALI VLDL                       VF+ VQEKVMNNLN+HASPETRTP GQQWVRGWDDFKRGRDGPI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

XP_022135400.1 uncharacterized protein LOC111007362 isoform X1 [Momordica charantia]3.1e-7069.65Show/hide
Query:  RMATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        RMATF RA+IKAH+VL +ET    R K++P +SGAF GLENLQTRLT+HYQ+Q G FF+FR SST  NPLPTDIDLSNEESKRRL NRLLYRS+QRG LE
Subjt:  RMATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDL+LGKWVEDHI S+DADGIKALI+VLDL                       VF+ VQEKV+NNLNRHA+PETRTP GQQWVRGWDDFK GRD PI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

XP_022135401.1 succinate dehydrogenase assembly factor 2, mitochondrial isoform X2 [Momordica charantia]9.0e-7069.5Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MATF RA+IKAH+VL +ET    R K++P +SGAF GLENLQTRLT+HYQ+Q G FF+FR SST  NPLPTDIDLSNEESKRRL NRLLYRS+QRG LEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ
        DL+LGKWVEDHI S+DADGIKALI+VLDL                       VF+ VQEKV+NNLNRHA+PETRTP GQQWVRGWDDFK GRD PI+GNQ
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ

XP_022930034.1 succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata]3.1e-7072.64Show/hide
Query:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        MATFRRA++KAHQVL L+ +ST FRSKS+P+L  A+  LENLQ RL NH QNQ G FF+FRCSSTT NPL TDIDLS+EESKRRL NRLLYRSKQRGFLE
Subjt:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDLVLGKWVEDHI+SLDADGI+ALI VLDL                       VF+ VQEKVMNNLN+HASPETRTP GQQWVRGWDDFKRGRDGPI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

XP_022994486.1 succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima]1.8e-7072.64Show/hide
Query:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        MATFRRAL+KAH+VL L+ +ST FRSKS+P+L  A+  LENLQ RL NH QNQ G FF+FRCSST+ NPL TDIDLSNEESKRRL NRLLYRSKQRGFLE
Subjt:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDLVLGKWVEDHI+SLDADGI ALI VLDL                       VF+ VQEKVMNNLN+HASPETRTP GQQWVRGWDDFKRGRDGPI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

TrEMBL top hitse value%identityAlignment
A0A5D3C9Y9 Succinate dehydrogenase assembly factor 24.4e-6266.34Show/hide
Query:  RMATFRRALIKAHQVLNLETS-TFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFL
        +MATF RAL KAHQVL L+ S T  RSK +P L   F GLENLQ++LTN  QN  G  F+   SST+TNP   DIDLSNE+SKR+L NRLLYRSKQRGFL
Subjt:  RMATFRRALIKAHQVLNLETS-TFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFL

Query:  ELDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISG
        ELDL+LGKWVEDHI SLDADGI+ LINVLDL                       VF+GV+EKVMNNLN+HASPETRTP GQQWVRGWDDFK+GRDGPI+G
Subjt:  ELDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISG

Query:  NQ
        NQ
Subjt:  NQ

A0A6J1C0N3 succinate dehydrogenase assembly factor 2, mitochondrial isoform X24.4e-7069.5Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MATF RA+IKAH+VL +ET    R K++P +SGAF GLENLQTRLT+HYQ+Q G FF+FR SST  NPLPTDIDLSNEESKRRL NRLLYRS+QRG LEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ
        DL+LGKWVEDHI S+DADGIKALI+VLDL                       VF+ VQEKV+NNLNRHA+PETRTP GQQWVRGWDDFK GRD PI+GNQ
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ

A0A6J1C101 uncharacterized protein LOC111007362 isoform X11.5e-7069.65Show/hide
Query:  RMATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        RMATF RA+IKAH+VL +ET    R K++P +SGAF GLENLQTRLT+HYQ+Q G FF+FR SST  NPLPTDIDLSNEESKRRL NRLLYRS+QRG LE
Subjt:  RMATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDL+LGKWVEDHI S+DADGIKALI+VLDL                       VF+ VQEKV+NNLNRHA+PETRTP GQQWVRGWDDFK GRD PI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

A0A6J1EQG7 succinate dehydrogenase assembly factor 2, mitochondrial1.5e-7072.64Show/hide
Query:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        MATFRRA++KAHQVL L+ +ST FRSKS+P+L  A+  LENLQ RL NH QNQ G FF+FRCSSTT NPL TDIDLS+EESKRRL NRLLYRSKQRGFLE
Subjt:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDLVLGKWVEDHI+SLDADGI+ALI VLDL                       VF+ VQEKVMNNLN+HASPETRTP GQQWVRGWDDFKRGRDGPI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

A0A6J1JZA0 succinate dehydrogenase assembly factor 2, mitochondrial8.8e-7172.64Show/hide
Query:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE
        MATFRRAL+KAH+VL L+ +ST FRSKS+P+L  A+  LENLQ RL NH QNQ G FF+FRCSST+ NPL TDIDLSNEESKRRL NRLLYRSKQRGFLE
Subjt:  MATFRRALIKAHQVLNLE-TSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLE

Query:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN
        LDLVLGKWVEDHI+SLDADGI ALI VLDL                       VF+ VQEKVMNNLN+HASPETRTP GQQWVRGWDDFKRGRDGPI+GN
Subjt:  LDLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGN

Query:  Q
        Q
Subjt:  Q

SwissProt top hitse value%identityAlignment
Q9FI44 Succinate dehydrogenase assembly factor 2, mitochondrial2.0e-4048.5Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MAT R+ALI  H+++   T+   RS  +P  +     +          ++N       F C + T +    DIDLSNEE+KRR +NRLLYRSKQRGFLEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ
        DLVLG WVE++++S+D +G+K+LI+VL+L                       VFS + EKVM NLN+HA+PETR  AGQ WVRGWDDFKRGRD PISGNQ
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ

Arabidopsis top hitse value%identityAlignment
AT5G51040.1 unknown protein1.4e-4148.5Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MAT R+ALI  H+++   T+   RS  +P  +     +          ++N       F C + T +    DIDLSNEE+KRR +NRLLYRSKQRGFLEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ
        DLVLG WVE++++S+D +G+K+LI+VL+L                       VFS + EKVM NLN+HA+PETR  AGQ WVRGWDDFKRGRD PISGNQ
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ

AT5G51040.2 unknown protein1.3e-3746.5Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MAT R+ALI  H+++   T+   RS  +P  +     +          ++N       F C + T +    DIDLSNEE+KRR +N    RSKQRGFLEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ
        DLVLG WVE++++S+D +G+K+LI+VL+L                       VFS + EKVM NLN+HA+PETR  AGQ WVRGWDDFKRGRD PISGNQ
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL-----------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ

AT5G51040.3 unknown protein1.6e-4046.41Show/hide
Query:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL
        MAT R+ALI  H+++   T+   RS  +P  +     +          ++N       F C + T +    DIDLSNEE+KRR +NRLLYRSKQRGFLEL
Subjt:  MATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNEESKRRLVNRLLYRSKQRGFLEL

Query:  DLVLGKWVEDHISSLDADGIKALINVLDL--------------------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRG
        DLVLG WVE++++S+D +G+K+LI+VL+L                                VFS + EKVM NLN+HA+PETR  AGQ WVRGWDDFKRG
Subjt:  DLVLGKWVEDHISSLDADGIKALINVLDL--------------------------------VFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRG

Query:  RDGPISGNQ
        RD PISGNQ
Subjt:  RDGPISGNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGACTCAAACCATACAGAGGTGCATGAGGACTCAAATGATTACAGAAAAGAAAAGAAAAGTTAAATTATCGTTGTTTTCATCTTGGGCGAGAATGGCGACTTTTAG
AAGAGCTCTGATCAAAGCTCATCAAGTTCTAAACTTAGAAACCTCTACCTTTTTTAGAAGCAAATCGGTGCCCATCTTGTCTGGCGCCTTTAATGGGTTGGAGAATCTGC
AAACCCGATTAACGAATCACTATCAGAATCAACCTGGTTTTTTCTTTACCTTTCGTTGCTCTTCGACGACTACAAATCCTCTACCGACAGATATCGACCTCTCAAATGAA
GAGAGCAAGAGGCGCTTGGTCAATAGGTTGCTGTACCGGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTGGAGGATCACATTAGTTCATT
GGATGCAGATGGTATCAAAGCTCTAATTAATGTTCTTGACCTGGTATTTAGTGGAGTGCAAGAGAAGGTCATGAACAATCTCAACAGACATGCCTCACCTGAGACACGGA
CACCAGCTGGTCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAGAGGTCGTGATGGCCCCATATCAGGAAACCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGACTCAAACCATACAGAGGTGCATGAGGACTCAAATGATTACAGAAAAGAAAAGAAAAGTTAAATTATCGTTGTTTTCATCTTGGGCGAGAATGGCGACTTTTAG
AAGAGCTCTGATCAAAGCTCATCAAGTTCTAAACTTAGAAACCTCTACCTTTTTTAGAAGCAAATCGGTGCCCATCTTGTCTGGCGCCTTTAATGGGTTGGAGAATCTGC
AAACCCGATTAACGAATCACTATCAGAATCAACCTGGTTTTTTCTTTACCTTTCGTTGCTCTTCGACGACTACAAATCCTCTACCGACAGATATCGACCTCTCAAATGAA
GAGAGCAAGAGGCGCTTGGTCAATAGGTTGCTGTACCGGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTGGAGGATCACATTAGTTCATT
GGATGCAGATGGTATCAAAGCTCTAATTAATGTTCTTGACCTGGTATTTAGTGGAGTGCAAGAGAAGGTCATGAACAATCTCAACAGACATGCCTCACCTGAGACACGGA
CACCAGCTGGTCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAGAGGTCGTGATGGCCCCATATCAGGAAACCAGTAA
Protein sequenceShow/hide protein sequence
MRTQTIQRCMRTQMITEKKRKVKLSLFSSWARMATFRRALIKAHQVLNLETSTFFRSKSVPILSGAFNGLENLQTRLTNHYQNQPGFFFTFRCSSTTTNPLPTDIDLSNE
ESKRRLVNRLLYRSKQRGFLELDLVLGKWVEDHISSLDADGIKALINVLDLVFSGVQEKVMNNLNRHASPETRTPAGQQWVRGWDDFKRGRDGPISGNQ