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Tan0011598 (gene) of Snake gourd v1 genome

Gene IDTan0011598
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationLG02:15336943..15341414
RNA-Seq ExpressionTan0011598
SyntenyTan0011598
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148715.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]4.9e-3684.95Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYG PPPQ QQ ++ VGFLEGCLAALCCC +LDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

XP_022927665.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]3.1e-3888.17Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG PPPQ+QQ R+EVGFLEGC+AALCCCFVLDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

XP_022952198.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]2.2e-3686.17Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAYGPP PQH   +KEVGF+EGCLAALCCCFVLD CF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

XP_023529875.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]9.0e-3887.1Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSY+ QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG PPPQ+QQ R+EVGFLEGC+AALCCCFVLDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]2.6e-3787.23Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GY PKDAYPPPGYPPQGGYPPAGYP  GYPPPAYGPAYGPP PQH   +KEVGF+EGCLAALCCCFVLD CF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0K2W8 Uncharacterized protein1.5e-3384.21Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGY-PPPAYGPAYG-PPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        SYYAQPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GY PPP YGPAYG  PPPQHQ  +KEVGF+EGCLAALCCCF+LD CF
Subjt:  SYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGY-PPPAYGPAYG-PPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

A0A6J1D3P4 cysteine-rich and transmembrane domain-containing protein WIH2-like2.4e-3684.95Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GYPKDAYPPPGYPPQ GYPP GYP  GYPPPAYGPAYG PPPQ QQ ++ VGFLEGCLAALCCC +LDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

A0A6J1EPM1 cysteine-rich and transmembrane domain-containing protein WIH2-like1.5e-3888.17Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG PPPQ+QQ R+EVGFLEGC+AALCCCFVLDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.1e-3686.17Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GY PKDAYPP GYPPQGGYPPAGYP  GYPPPAYGPAYGPP PQH   +KEVGF+EGCLAALCCCFVLD CF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGY-PKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

A0A6J1JP18 cysteine-rich and transmembrane domain-containing protein WIH2-like1.5e-3888.17Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        MSYY QPPPPVGVPPPQGYPP GYPKDAYPPPG+PP  GYPPAGYPQ GYPPPAYGPAYG PPPQ+QQ R+EVGFLEGC+AALCCCFVLDACF
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin2.9e-0764.29Show/hide
Query:  PPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPR
        PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ   P+
Subjt:  PPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPR

Q17094 Rhodopsin (Fragment)2.9e-0764.29Show/hide
Query:  PPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPR
        PPQGYPP GYP    PP GYPPQ GYPP GYP  GYPPP  GP    PPPQ   P+
Subjt:  PPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPR

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B4.1e-1758Show/hide
Query:  AQPPPPVGVPPPQGYPPAGYPKDAYPPPG--YPPQGGYPPAGYPQPGYPPPAYG---------PAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF
        +Q PP VGVPP   YP  G PKDAYPPPG  YP QG  PP GYPQ GYPP  Y          P  G PP Q QQ +   G LEGC+AALCC  VLDACF
Subjt:  AQPPPPVGVPPPQGYPPAGYPKDAYPPPG--YPPQGGYPPAGYPQPGYPPPAYG---------PAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH21.2e-2973.27Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC
        MS Y Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    PP Y P Y PPPPQHQQ +   GFLEGCLAALCCC +LDAC
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC

Query:  F
        F
Subjt:  F

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH15.9e-1660.22Show/hide
Query:  YAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQ---QPRKEVGFLEGCLAALCCCFVLDACF
        Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PPPQ+    Q ++  G LEGCLAALCCC +LDACF
Subjt:  YAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQ---QPRKEVGFLEGCLAALCCCFVLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein8.7e-3173.27Show/hide
Query:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC
        MS Y Q  PPVGVPPPQGYPP GYPKDAYPP GYPPQG    GYPP GYPQ GYP    PP Y P Y PPPPQHQQ +   GFLEGCLAALCCC +LDAC
Subjt:  MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQG----GYPPAGYPQPGYP----PPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC

Query:  F
        F
Subjt:  F

AT3G49845.1 unknown protein5.0e-1853.98Show/hide
Query:  PPPVGVPPPQGYPPAGYPKDA-YPPPGYPPQGGYPPAGYPQP-----------GYPPPAYG-------PAYGPPPPQH-QQPRKEV-------GFLEGCL
        PPP G PP +GYPPAGYP  A YPPP Y PQ GYPPAGYP P           GYPPP Y        P  GPPPP + Q P K         GF+EGCL
Subjt:  PPPVGVPPPQGYPPAGYPKDA-YPPPGYPPQGGYPPAGYPQP-----------GYPPPAYG-------PAYGPPPPQH-QQPRKEV-------GFLEGCL

Query:  AALCCCFVLDACF
        A LCCC +L+ACF
Subjt:  AALCCCFVLDACF

AT4G33660.1 unknown protein3.6e-0852.05Show/hide
Query:  PPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC
        P   YP   YP PG  PQG  PP G P   YPPP       PPPP    P ++VGFLEG LAALCCC ++D C
Subjt:  PPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDAC

AT5G45350.1 proline-rich family protein1.1e-0657.14Show/hide
Query:  PPVGVPPPQGYPPAGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYG--PPPPQH
        PP G PPP  YPPAGYP+  YPPP   YPP  GYPP  YP    GYPP P YG     P YG  PP P H
Subjt:  PPVGVPPPQGYPPAGYPKDAYPPP--GYPPQGGYPPAGYPQP--GYPP-PAYG-----PAYG--PPPPQH

AT5G67600.1 unknown protein4.2e-1760.22Show/hide
Query:  YAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQ---QPRKEVGFLEGCLAALCCCFVLDACF
        Y Q   PVG PPPQGYP    PKD YPP GYPP  GYPP GY Q GY      PA G PPPQ+    Q ++  G LEGCLAALCCC +LDACF
Subjt:  YAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQ---QPRKEVGFLEGCLAALCCCFVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACGCCCAACCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGCAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCA
GGGTGGTTATCCTCCTGCTGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGTCCACCTCCGCCTCAACATCAACAACCACGGAAAGAAGTTG
GATTCCTCGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATTCAAACTTCAAAAGAAATAAAATGAAAAAAGAAATCCGGACCTAAAGTGATTATTCGTATTGTTTTATAGTTAATGGCTCTGGTCTCTCTGTTTGGCAACTAAGAAAA
TCAATCCGATCGTTGAAGAAATCTCAGAGAGAAAAAGAGAGGGAAAAAAATGAGTTACTACGCCCAACCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGC
CGGCAGGTTATCCGAAGGACGCTTATCCACCGCCAGGATATCCGCCGCAGGGTGGTTATCCTCCTGCTGGTTATCCTCAGCCGGGATATCCGCCTCCGGCGTATGGTCCG
GCGTACGGTCCACCTCCGCCTCAACATCAACAACCACGGAAAGAAGTTGGATTCCTCGAAGGCTGTTTGGCTGCTCTTTGCTGTTGCTTCGTCTTGGATGCTTGCTTCTG
ATGACAATAGACAGCCGTTTTGACTGATCATATGGCATACAAAATTTGAATCTCCATTTTGATTTTGATTTTTATTTGGATTTGAATTTGAATTTGAATTTGATGTCTCC
AATATCTAACATTTCATCTCCATATCTTTTGTCAGTGTGTAACATCCATCTTTTTTATTTCCATTATACGTACTCTTCA
Protein sequenceShow/hide protein sequence
MSYYAQPPPPVGVPPPQGYPPAGYPKDAYPPPGYPPQGGYPPAGYPQPGYPPPAYGPAYGPPPPQHQQPRKEVGFLEGCLAALCCCFVLDACF