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Tan0011680 (gene) of Snake gourd v1 genome

Gene IDTan0011680
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG01:83638381..83650634
RNA-Seq ExpressionTan0011680
SyntenyTan0011680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592191.1 hypothetical protein SDJN03_14537, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4291.75Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        M++ NGVKSCAKLLKSSESLLVKSANRG HSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK+QKLTMTLGVLTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
XP_004138643.2 uncharacterized protein LOC101217188 [Cucumis sativus]2.0e-4394.85Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        MSL NGVKSCAKLLKSSE LLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
XP_008441241.1 PREDICTED: uncharacterized protein LOC103485430 [Cucumis melo]4.4e-4394.79Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTAS
        MSLGNG+KSCAKLLKSSE LLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTAS
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTAS
XP_022936374.1 uncharacterized protein LOC111443011 [Cucurbita moschata]2.8e-4291.75Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        M++ NGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK+QKLTMTL VLTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
XP_038899385.1 uncharacterized protein LOC120086696 [Benincasa hispida]6.7e-4495.88Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        MSL NGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMKNQKLTMTLGV TAFSIGV VPIYAVIFQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
TrEMBL top hitse value%identityAlignment
A0A0A0LQ20 Uncharacterized protein4.7e-4393.81Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        MSL NGVKSCAKLLKSSE LL KSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
A0A1S3B3R2 uncharacterized protein LOC1034854302.1e-4394.79Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTAS
        MSLGNG+KSCAKLLKSSE LLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK QKLTMTLGVLTAFSIGVGVPIYAV+FQQKKTAS
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTAS
A0A6J1FDG6 uncharacterized protein LOC1114430111.4e-4291.75Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        M++ NGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGH HGHDEPYYLHAKHMYNLDRMK+QKLTMTL VLTAFSIGVGVPI+AV+FQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
A0A6J1IGC8 uncharacterized protein LOC1114769902.3e-4290.72Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        M++ NGVKSCAKLLKSSESLLVKSANRG HSTGVK+MGGH HGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPI+AV+FQQKKT SG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
A0A6J1J2Q3 uncharacterized protein LOC1114807175.2e-4290.72Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        MS GNGVKSCAKL+KSSE LL+KSANRGFHST VKRMGGH HGHDEPYYLHAKHMYNLDRMKNQKL+M LGV TAFSIGVGVPIYAVIFQQKKTASG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72020.1 unknown protein2.9e-2962.89Show/hide
Query:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG
        M+L   ++S +K++ SSE+ + +S  R FHSTGVK+M G  HG  + YYLHAKHMYNLDRMK Q L M+LGV TAFSIGVGVPI+AV+FQQ+KT SG
Subjt:  MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTAGGCAATGGAGTGAAGTCCTGTGCAAAGCTGCTGAAGTCTTCAGAATCATTGTTGGTGAAATCAGCTAATCGAGGATTTCACTCAACTGGGGTGAAGAGAAT
GGGAGGACACACACACGGACACGATGAACCATACTATTTGCACGCGAAACACATGTACAACTTGGATAGGATGAAAAACCAGAAGCTGACCATGACGCTCGGCGTTCTCA
CTGCATTCAGCATTGGTGTGGGCGTTCCAATCTATGCCGTCATCTTTCAGCAAAAGAAGACGGCCTCTGGATGA
mRNA sequenceShow/hide mRNA sequence
GTAAAGTTGCCCTAATTGGCGACCTGTGTATAAAAGGCTTCCTTCTACACATCAAAATCTAATCGGTCTTCGTCACTGCGAAAGCAAACTGAACTCTTGATTGAGCAAAT
AAGTGAAAAGGGAGAACTAACTGCAAGCAGAGAAAATGTCCTTAGGCAATGGAGTGAAGTCCTGTGCAAAGCTGCTGAAGTCTTCAGAATCATTGTTGGTGAAATCAGCT
AATCGAGGATTTCACTCAACTGGGGTGAAGAGAATGGGAGGACACACACACGGACACGATGAACCATACTATTTGCACGCGAAACACATGTACAACTTGGATAGGATGAA
AAACCAGAAGCTGACCATGACGCTCGGCGTTCTCACTGCATTCAGCATTGGTGTGGGCGTTCCAATCTATGCCGTCATCTTTCAGCAAAAGAAGACGGCCTCTGGATGAT
AACTGAAACAACAATAAGAAGAAAGGAAGATTCGTTGCAGCTCAGTTCCTCTCGTTTGTTTTCTTTACTCTGTATAAACCCTCATTTCAAATCCACAGGAACTCGGAAAC
TGGATTCTGTTTTTGCCAATAAGTCTTTTTTTCCATCAACATCAAAATCCCATTATTCGACGTTTTGATCCAATTTTTTTTACCAACCTCCTTCCCTGCATTTGTGTTTA
GTTTTATCTATTCCAATGAATATGATATGTATGGTTGGAGGAGGTCAATGAGGTCTGTACACTTTTTGTGCATTGGATATTGATCAATTTCCTGCTATTAAATACGCCAA
GCGACAGTTTCTTTGGCAATCAAACAGTCGTCTCTTCCATCCTGAGTAGTCACAAGTAGAAATTATTGTTTTTCCA
Protein sequenceShow/hide protein sequence
MSLGNGVKSCAKLLKSSESLLVKSANRGFHSTGVKRMGGHTHGHDEPYYLHAKHMYNLDRMKNQKLTMTLGVLTAFSIGVGVPIYAVIFQQKKTASG