; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011700 (gene) of Snake gourd v1 genome

Gene IDTan0011700
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG05:13737790..13739975
RNA-Seq ExpressionTan0011700
SyntenyTan0011700
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033257.1 hypothetical protein E6C27_scaffold845G00530 [Cucumis melo var. makuwa]9.9e-4352.98Show/hide
Query:  LSTPK---EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSID
        +S PK   ++   V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC +AL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+ NH++WS ++
Subjt:  LSTPK---EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSID

Query:  VDMNALPPIVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        V+ N LPP+ +R AGRPRK++IPSI EV   +KCSRC R GHN RTC F P
Subjt:  VDMNALPPIVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]9.9e-4356.52Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC HAL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+GNH++WS + V+ N LPP+ +R 
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        AGRPRK++IPSI EV   +KCSRC R  HN RTC+F P
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]2.0e-4357.25Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC HAL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+GNH++WS ++V+ N LPP+ +R 
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        AGRPRK++IPSI EV   +KCSRC R GHN RTC+F P
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

XP_008467000.1 PREDICTED: uncharacterized protein LOC103504407, partial [Cucumis melo]3.1e-4460Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+ I++ E++V++   QF+V+LD  SC+CRVWD D+IPC HAL VLR  S+N+YSFVSKY+ S TL STY G +RPVGNH+ W SI ++ N LPP  KR+
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPPFL
        AG+ +KQ+I SI E +SH++CS CHR GHNRR CKFPPFL
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPPFL

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]1.1e-4463.31Show/hide
Query:  EVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKR
        +VDPI+N EYKV+D DN FLV L + SCSCRVWD  EIPC HA  V+   +++ Y+FV  YYF  TL STY G + P+GNHS+W SIDV +N LPPIVKR
Subjt:  EVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKR

Query:  QAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
          GRPRKQ+I SI E +  +KCSRCHR GHN RTCKFPP
Subjt:  QAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044071.5e-4460Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+ I++ E++V++   QF+V+LD  SC+CRVWD D+IPC HAL VLR  S+N+YSFVSKY+ S TL STY G +RPVGNH+ W SI ++ N LPP  KR+
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPPFL
        AG+ +KQ+I SI E +SH++CS CHR GHNRR CKFPPFL
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPPFL

A0A5A7SVB1 ZnF_PMZ domain-containing protein4.8e-4352.98Show/hide
Query:  LSTPK---EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSID
        +S PK   ++   V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC +AL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+ NH++WS ++
Subjt:  LSTPK---EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSID

Query:  VDMNALPPIVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        V+ N LPP+ +R AGRPRK++IPSI EV   +KCSRC R GHN RTC F P
Subjt:  VDMNALPPIVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

A0A5D3BD68 SWIM-type domain-containing protein4.8e-4356.52Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC HAL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+GNH++WS + V+ N LPP+ +R 
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        AGRPRK++IPSI EV   +KCSRC R  HN RTC+F P
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

A0A5D3BVP4 SWIM-type domain-containing protein9.6e-4457.25Show/hide
Query:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ
        V+P+S  E++VVD    FLVKL+  SCSC  WD +EIPC HAL+V+R  ++N Y+FVS+YY++  LS+TYGG++RP+GNH++WS ++V+ N LPP+ +R 
Subjt:  VDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQ

Query:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP
        AGRPRK++IPSI EV   +KCSRC R GHN RTC+F P
Subjt:  AGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPP

A0A5D3C7L7 Uncharacterized protein1.1e-4259.29Show/hide
Query:  EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPP
        E  S VDPIS  EY+V + + QF+VKL+   CSCRVWD +EIPC HALVVLR  ++++YS+VS++Y+ ETLS TY G I+PVG+H +W  +D  M  LPP
Subjt:  EIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPP

Query:  IVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCK
        + KRQAGRP KQ+IPS+ E  S TKCS C+R GHN RTCK
Subjt:  IVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase4.6e-0623.26Show/hide
Query:  NSIRASHRQASSSLISDYLKDDFRFRSSDLSTPKEIMSEVDPI-------SNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSY
        + +R+S  ++ SS+ S  L     +    +   +E M++  P         +F+        +++V+L+  +C+CR +   + PC HAL V  +  +N  
Subjt:  NSIRASHRQASSSLISDYLKDDFRFRSSDLSTPKEIMSEVDPI-------SNFEYKVVDNDNQFLVKLDFGSCSCRVWDHDEIPCCHALVVLREFSVNSY

Query:  SFVSKYYFSETLSSTYGGVIRPVGNHSEW
         +V + Y  E    TY     PV + + W
Subjt:  SFVSKYYFSETLSSTYGGVIRPVGNHSEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTTGATGGGTCCTTTTGTGCAATTAGTGATGGAAGTGACAAACTCATCGCGTTATAAGAATAGTAATTTGTGGATGCTTAGGAAGTATGTTTCTAGTCACAG
TTGTTCTATAAATAGTATTCGAGCTTCTCATAGGCAAGCTTCTTCATCTTTAATTAGTGATTATTTGAAAGATGACTTTAGATTTCGCTCTTCTGATCTATCGACTCCTA
AAGAAATTATGTCTGAAGTTGATCCCATTAGCAACTTTGAATATAAAGTAGTTGATAATGACAATCAATTCTTAGTAAAGTTGGATTTTGGGTCGTGTAGTTGTCGTGTT
TGGGATCATGATGAAATTCCATGTTGTCATGCACTTGTTGTTCTTCGTGAGTTTAGTGTGAATTCTTATTCTTTTGTGTCTAAGTATTATTTCTCAGAAACGTTGTCATC
AACTTATGGAGGTGTAATTCGCCCAGTTGGGAATCATTCTGAATGGAGTTCTATAGATGTTGACATGAATGCATTACCTCCAATTGTTAAACGTCAAGCAGGAAGACCTC
GAAAGCAAAAGATTCCATCGATTAGTGAAGTAAGAAGTCACACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATCGTAGGACATGTAAATTTCCACCATTTTTACCA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTTGATGGGTCCTTTTGTGCAATTAGTGATGGAAGTGACAAACTCATCGCGTTATAAGAATAGTAATTTGTGGATGCTTAGGAAGTATGTTTCTAGTCACAG
TTGTTCTATAAATAGTATTCGAGCTTCTCATAGGCAAGCTTCTTCATCTTTAATTAGTGATTATTTGAAAGATGACTTTAGATTTCGCTCTTCTGATCTATCGACTCCTA
AAGAAATTATGTCTGAAGTTGATCCCATTAGCAACTTTGAATATAAAGTAGTTGATAATGACAATCAATTCTTAGTAAAGTTGGATTTTGGGTCGTGTAGTTGTCGTGTT
TGGGATCATGATGAAATTCCATGTTGTCATGCACTTGTTGTTCTTCGTGAGTTTAGTGTGAATTCTTATTCTTTTGTGTCTAAGTATTATTTCTCAGAAACGTTGTCATC
AACTTATGGAGGTGTAATTCGCCCAGTTGGGAATCATTCTGAATGGAGTTCTATAGATGTTGACATGAATGCATTACCTCCAATTGTTAAACGTCAAGCAGGAAGACCTC
GAAAGCAAAAGATTCCATCGATTAGTGAAGTAAGAAGTCACACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATCGTAGGACATGTAAATTTCCACCATTTTTACCA
TGA
Protein sequenceShow/hide protein sequence
MLVLMGPFVQLVMEVTNSSRYKNSNLWMLRKYVSSHSCSINSIRASHRQASSSLISDYLKDDFRFRSSDLSTPKEIMSEVDPISNFEYKVVDNDNQFLVKLDFGSCSCRV
WDHDEIPCCHALVVLREFSVNSYSFVSKYYFSETLSSTYGGVIRPVGNHSEWSSIDVDMNALPPIVKRQAGRPRKQKIPSISEVRSHTKCSRCHRVGHNRRTCKFPPFLP