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Tan0011708 (gene) of Snake gourd v1 genome

Gene IDTan0011708
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG02:55921544..55921951
RNA-Seq ExpressionTan0011708
SyntenyTan0011708
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026069.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4272.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN SM EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTT+LNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4272.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4272.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4272.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4272.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

TrEMBL top hitse value%identityAlignment
A0A5A7SLD1 Gag/pol protein8.5e-4372.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN SM EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTT+LNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

A0A5A7SMH8 Gag/pol protein8.5e-4372.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

A0A5A7TU93 Gag/pol protein8.5e-4372.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

A0A5A7V4M1 Gag/pol protein8.5e-4372.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

A0A5D3CPJ6 Gag/pol protein8.5e-4372.39Show/hide
Query:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG
        MFGQ S Q++H++LKY+YN+ M EG+SVREHVL++MVHFNVAEMNGA IDE SQVSFILESLP+SFLQFRSNAVMNKI Y LTTLLNELQTF++LMK KG
Subjt:  MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKG

Query:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK
           GEAN+   +R+F +GS+SGTKS  SSS  KK
Subjt:  HADGEANLFVHSRRFQKGSSSGTKSCGSSSELKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGACAACCGTCTGGACAACTTCGGCACGAATCCCTCAAATACGTTTATAACTCCAGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGCTGAGATGAATGGAGCGGCCATTGACGAGCAAAGTCAGGTCTCGTTCATCCTGGAATCTCTTCCAAAGAGTTTCCTGCAATTTCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCCAGACTCTTATGAAGAATAAGGGACATGCTGATGGAGAGGCAAATTTGTTTGTC
CATTCCAGAAGGTTTCAGAAGGGTTCATCCTCTGGGACTAAGTCATGTGGTTCATCTTCTGAGCTTAAGAAGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGACAACCGTCTGGACAACTTCGGCACGAATCCCTCAAATACGTTTATAACTCCAGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTTGATCTGATGGT
CCACTTCAACGTGGCTGAGATGAATGGAGCGGCCATTGACGAGCAAAGTCAGGTCTCGTTCATCCTGGAATCTCTTCCAAAGAGTTTCCTGCAATTTCGCAGCAATGCGG
TGATGAACAAGATAGAGTATAACCTGACTACTCTCCTTAATGAACTACAAACTTTCCAGACTCTTATGAAGAATAAGGGACATGCTGATGGAGAGGCAAATTTGTTTGTC
CATTCCAGAAGGTTTCAGAAGGGTTCATCCTCTGGGACTAAGTCATGTGGTTCATCTTCTGAGCTTAAGAAGACCTAA
Protein sequenceShow/hide protein sequence
MFGQPSGQLRHESLKYVYNSSMKEGSSVREHVLDLMVHFNVAEMNGAAIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYNLTTLLNELQTFQTLMKNKGHADGEANLFV
HSRRFQKGSSSGTKSCGSSSELKKT