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Tan0011710 (gene) of Snake gourd v1 genome

Gene IDTan0011710
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationLG03:40516642..40517491
RNA-Seq ExpressionTan0011710
SyntenyTan0011710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]2.2e-2594.12Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLLHHTAIHT+RAYPRFRLAFSRLF S FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]5.8e-2695.59Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLLHHTAIHT+RAYPRFRLAFSRLF SVFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2185.29Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLE+LL  +A HTLR YPRFR AFSRLF S+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2389.71Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLEDL  HTA HT RAYPRFRLAFSR+FGSVFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2389.71Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLEDL  HTA HT RAYPRFRLAFSR+FGSVFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein2.8e-2695.59Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLLHHTAIHT+RAYPRFRLAFSRLF SVFRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
A0A2C9V7E1 Uncharacterized protein1.5e-1981.54Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSLN FVET+EDLL  TA ++LRAYPRFRLAFSR+F ++FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 11.1e-2594.12Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLLHHTAIHT+RAYPRFRLAFSRLF S FRVSYSR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR
A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X16.7e-2080Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+ED+L  T ++TLRAYPR RL FSR+FGS+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X26.7e-2080Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+ED+L  T ++TLRAYPR RL FSR+FGS+F +S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein7.8e-1353.85Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS
        MLQLFF +AFSA PLTLY+PPIR L +FVET+E++     +++ R +PR R+A+SRL    F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTACCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAATCTGTTCGTCGAAACCCTAGAAGATCTTCTCCA
TCACACCGCCATTCATACACTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCCGCGTTTCTTATTCCAGGTAG
mRNA sequenceShow/hide mRNA sequence
AAATTACCCAACTACTCCTCCATTGACCTTTGATGTAAACAAAAACCAAAGCACGAAATCCATTCCAATGGGCTCTCTTTCCTTCAATTTTCGTCTTCAATTTTCGTCTT
CAATTTTCCCACGGATTTCAATTTGGATAAACACTTCTCTCATCCCTTATCTTCTCCTTTGAAAGGAATCTTTATATTAATCGAATCCTCCATCTTCGATCTTCAATTCC
TCGCACTTTTGATCTCTGATCCAAACAAGCTCAAATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTACCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCA
ATCTGTTCGTCGAAACCCTAGAAGATCTTCTCCATCACACCGCCATTCATACACTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTC
CGCGTTTCTTATTCCAGGTAGATTCGTCTCGATTTGATTCTTCTTCAAGCTGAGCGACTTAACTTGAGGCTATTTGTTTTGCTATTGCTGTTGCTGGTGGTGCCGTTGTT
GTTTGATTTTGGAGATTCGATCGATTCGTGTTGTTGAATTTCTGTTTATTAGGATTTTTAATCTTGAATGTTGAATCTCTCTTCGCTGTTGTACATTGAACTACGGTTTT
GGTTTGGAATCATTCGTGATGATGGATTTTCGTTTCGTTTCGTTCTTCTCTGATTCTGTTTCCGATCCGTTTTGAGCTTTGGATTTTTCAGATTCTCTGTTTCTTTTCCG
TCCTTGTAATTAGGTCATGTCATGTGAATGTGATTTGTTGAGCAGATCAGATTAATGGAATGGATTCGATTATGAGCAAA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLHHTAIHTLRAYPRFRLAFSRLFGSVFRVSYSR