; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011719 (gene) of Snake gourd v1 genome

Gene IDTan0011719
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationLG06:12288320..12289090
RNA-Seq ExpressionTan0011719
SyntenyTan0011719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.6e-5246.46Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD    ++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
        GAEKLR MA  AD+ + +A  LRQG++PT+   E+L  FL +IG+ LG FGCYH
Subjt:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.2e-3947.57Show/hide
Query:  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQ
        +LR+ N+ L  E E L+ E  ++  H K+LK E+  ++ V  +FQ  L EQ T +Q     +    E+LQ  T EYK +  + + +N LLQ+ +AS EHQ
Subjt:  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQ

Query:  LVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLG
        L++ +NA EVV EDHARLK EH+ +  +FAIWRDEY  +R +Y+ +KGQ+EQG +KLR MARKAD+ + R   L+Q IVP Q G  +L RFL +IG  LG
Subjt:  LVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLG

Query:  HFGCYH
         FGCYH
Subjt:  HFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.3e-3338.93Show/hide
Query:  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSL
        +WI   +S  R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K                                 T + +
Subjt:  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSL

Query:  EKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMAR
            EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A +V+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD   G++E+GAEKLR MAR
Subjt:  EKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMAR

Query:  KADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
         AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG F CYH
Subjt:  KADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.9e-5446.85Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ L +EYKSQ ++ + +N  LQ  + S E QL++ + A EV+++D+A+L E++Q M+ +F +W+DEY  LRR+YD   G++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
        GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG FGCYH
Subjt:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]1.3e-3341.96Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+                  K FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD    ++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQ
        GAEKLR MA  AD+ + +A  LRQ
Subjt:  GAEKLRLMARKADRLAERASILRQ

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like6.2e-3441.96Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+                  K FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD    ++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQ
        GAEKLR MA  AD+ + +A  LRQ
Subjt:  GAEKLRLMARKADRLAERASILRQ

A0A5A7SM49 Glial fibrillary acidic protein-like1.7e-5246.46Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD    ++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
        GAEKLR MA  AD+ + +A  LRQG++PT+   E+L  FL +IG+ LG FGCYH
Subjt:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

A0A5A7TXA1 Glial fibrillary acidic protein-like6.2e-3438.93Show/hide
Query:  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSL
        +WI   +S  R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K                                 T + +
Subjt:  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSL

Query:  EKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMAR
            EVLQ   +EYKSQ ++ E +N  LQ  + S E QL++ + A +V+ +D+A+L E++Q M+ +F +W+DEY  LRR+YD   G++E+GAEKLR MAR
Subjt:  EKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMAR

Query:  KADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
         AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG F CYH
Subjt:  KADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like1.4e-5446.85Show/hide
Query:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV
        ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ 
Subjt:  ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQV

Query:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ
          SQ+T + +    EVLQ L +EYKSQ ++ + +N  LQ  + S E QL++ + A EV+++D+A+L E++Q M+ +F +W+DEY  LRR+YD   G++E+
Subjt:  TKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQ

Query:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH
        GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG FGCYH
Subjt:  GAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

A0A5D3BQ93 Glial fibrillary acidic protein-like5.8e-4047.57Show/hide
Query:  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQ
        +LR+ N+ L  E E L+ E  ++  H K+LK E+  ++ V  +FQ  L EQ T +Q     +    E+LQ  T EYK +  + + +N LLQ+ +AS EHQ
Subjt:  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQ

Query:  LVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLG
        L++ +NA EVV EDHARLK EH+ +  +FAIWRDEY  +R +Y+ +KGQ+EQG +KLR MARKAD+ + R   L+Q IVP Q G  +L RFL +IG  LG
Subjt:  LVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLG

Query:  HFGCYH
         FGCYH
Subjt:  HFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAATGAGGAATTAAGGGTTGAAGTTAAATTATGGATTGGACAATCCACAAGCGCGAAAAGACAGTTGGAAGAAGTTCAACAGCGTTTACAGAGGCAGCTTGA
ATTAGAGAGGGAAAACGGTTCTCCAAACGTAGAAGTCGTCCAACTACGAAAGAAAAATAGGGGCTTGTGGAGAGAAATAGAAGTCCTACAAGGTGAGGCAGAGGCTCAGA
AATTACACATCAAAGACCTGAAGCAAGAGGTACGGAAGCTCAACAATGTCATGAAAAACTTCCAAGATATACTTAACGAACAAGTTACAAAGTCACAGGAGACAATTGTG
TCTTTGGAAAAAGAAAAGGAAGTTTTGCAAAAGCTGACAGATGAGTATAAGAGCCAATTCGTCGATGTAGAACGGAGAAACACACTGCTTCAAGATACTATTGCAAGTTT
GGAGCACCAGTTGGTAGTATATCAAAATGCGAACGAAGTAGTGATGGAAGATCATGCACGATTAAAAGAAGAGCATCAGGTGATGAATACAAACTTTGCCATTTGGAGAG
ACGAGTATGGAAATCTGAGACGCCGTTATGACTACATAAAAGGACAAGTTGAACAAGGAGCCGAGAAGTTAAGATTGATGGCTAGAAAGGCTGATCGATTAGCTGAAAGA
GCCAGTATTCTTCGACAAGGCATCGTTCCCACACAGCCAGGCGGTGAAGATTTGATTAGATTCCTATGGGTGATAGGACGAGACCTCGGGCATTTTGGGTGTTACCATTA
G
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAATGAGGAATTAAGGGTTGAAGTTAAATTATGGATTGGACAATCCACAAGCGCGAAAAGACAGTTGGAAGAAGTTCAACAGCGTTTACAGAGGCAGCTTGA
ATTAGAGAGGGAAAACGGTTCTCCAAACGTAGAAGTCGTCCAACTACGAAAGAAAAATAGGGGCTTGTGGAGAGAAATAGAAGTCCTACAAGGTGAGGCAGAGGCTCAGA
AATTACACATCAAAGACCTGAAGCAAGAGGTACGGAAGCTCAACAATGTCATGAAAAACTTCCAAGATATACTTAACGAACAAGTTACAAAGTCACAGGAGACAATTGTG
TCTTTGGAAAAAGAAAAGGAAGTTTTGCAAAAGCTGACAGATGAGTATAAGAGCCAATTCGTCGATGTAGAACGGAGAAACACACTGCTTCAAGATACTATTGCAAGTTT
GGAGCACCAGTTGGTAGTATATCAAAATGCGAACGAAGTAGTGATGGAAGATCATGCACGATTAAAAGAAGAGCATCAGGTGATGAATACAAACTTTGCCATTTGGAGAG
ACGAGTATGGAAATCTGAGACGCCGTTATGACTACATAAAAGGACAAGTTGAACAAGGAGCCGAGAAGTTAAGATTGATGGCTAGAAAGGCTGATCGATTAGCTGAAAGA
GCCAGTATTCTTCGACAAGGCATCGTTCCCACACAGCCAGGCGGTGAAGATTTGATTAGATTCCTATGGGTGATAGGACGAGACCTCGGGCATTTTGGGTGTTACCATTA
G
Protein sequenceShow/hide protein sequence
MKENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIV
SLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAER
ASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH