; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011743 (gene) of Snake gourd v1 genome

Gene IDTan0011743
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMyb-like transcription factor tcl2
Genome locationLG07:66807946..66808375
RNA-Seq ExpressionTan0011743
SyntenyTan0011743
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3960445.1 hypothetical protein CMV_014845 [Castanea mollissima]1.9e-1865.33Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+PRKQ K+R+SKSE     +EV S+EW+ I+++EQEEDLI RM+RLVGDRWDLIAGR+PGR   +IERFWI++H
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

XP_022146038.1 transcription factor CPC-like isoform X2 [Momordica charantia]1.0e-2475.58Show/hide
Query:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS
        ME EA K+ KQP+KQ KSR S SE      EV SLEW++IQISEQEEDLI RMH+LVGDRWDLIAGRIPGRTA++IERFWILKHAS
Subjt:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS

XP_023912293.1 transcription factor CPC-like isoform X1 [Quercus suber]1.9e-1866.67Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+PRKQ K+R+S SE     +EV S+EW+ I+++EQEEDLI RM+RLVGDRWDLIAGRIPGR   DIERFWI++H
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

XP_038680402.1 transcription factor CPC-like [Tripterygium wilfordii]2.9e-1966.67Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+PRKQ K+R++ SE      EV S+EWE I+++EQEEDLI+RMHRLVGD+WDLIAGRIPGR A +IERFWI++H
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

XP_038874276.1 transcription factor CPC-like [Benincasa hispida]5.5e-2677.91Show/hide
Query:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS
        ME EA K AKQP+KQ K R S SE      EV SLEWEVIQIS+QEEDLIHRMHRLVGDRWDLIAGRIPGRTA++IERFWILKH S
Subjt:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS

TrEMBL top hitse value%identityAlignment
A0A2G5CTG8 SANT domain-containing protein2.1e-1868Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+ RKQ K  T+K E    F EV S+EWE IQ+S+QEEDLI+RMH+LVGDRWDLIAGRIPGR   +IERFWI+KH
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

A0A4V6A0D9 Transcription factor TRY-like3.5e-1866.67Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        ++ RKQ K   S+SE      EV S+EWE I +SEQEEDLIHRM+RLVG+RWDLIAGRIPGR A +IERFWI+KH
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

A0A6J1CXI2 transcription factor CPC-like isoform X25.1e-2575.58Show/hide
Query:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS
        ME EA K+ KQP+KQ KSR S SE      EV SLEW++IQISEQEEDLI RMH+LVGDRWDLIAGRIPGRTA++IERFWILKHAS
Subjt:  METEA-KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS

A0A7J6WC71 Myb-like transcription factor tcl23.5e-1868Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+ RKQ K  T+K E    F EV S+EWE IQ+SEQEEDLI RMH+LVGD+WDLIAGRIPGR   +IERFWI+KH
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

B9N984 SANT domain-containing protein3.5e-1863.75Show/hide
Query:  EAKIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        E+   ++ RKQ K  +S+SE      EV S+EWE I +SEQEEDLI+RMHRLVG+RWDLIAGRIPGR A +IERFWI+KH
Subjt:  EAKIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.4e-1669.09Show/hide
Query:  SEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        +EV S++WE I ++EQEEDLI RMHRLVGDRWDLIAGR+ GR A DIER+WI+++
Subjt:  SEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

O22059 Transcription factor CPC3.1e-1957.69Show/hide
Query:  KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+ K+ R+Q K++ S SE      EV S+EWE +++SE+EEDLI RM++LVGDRW+LIAGRIPGRT  +IER+W++KH
Subjt:  KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

Q8GV05 Transcription factor TRY3.7e-1756.58Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHA
        ++ RKQ+K     SE      EV S+EWE I ++EQEEDLI RM+RLVGDRWDLIAGR+PGR   +IER+WI++++
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHA

Q9LNI5 MYB-like transcription factor ETC11.1e-1656.94Show/hide
Query:  RKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        RK    +T+ +       EV SLEWE I ++++EEDLI RM++LVG+RWDLIAGRIPGRTA +IERFW++K+
Subjt:  RKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

Q9M157 MYB-like transcription factor ETC32.0e-1862.67Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        KQP K     TS SE      EV SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA +IERFW++K+
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

Arabidopsis top hitse value%identityAlignment
AT2G46410.1 Homeodomain-like superfamily protein2.2e-2057.69Show/hide
Query:  KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        K+ K+ R+Q K++ S SE      EV S+EWE +++SE+EEDLI RM++LVGDRW+LIAGRIPGRT  +IER+W++KH
Subjt:  KIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

AT4G01060.1 CAPRICE-like MYB31.3e-2064Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        KQP K     TS SEG    +EV SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA +IERFW++K+
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

AT4G01060.2 CAPRICE-like MYB34.8e-2072.73Show/hide
Query:  SEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        SEV SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA +IERFW++K+
Subjt:  SEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

AT4G01060.3 CAPRICE-like MYB31.4e-1962.67Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH
        KQP K     TS SE      EV SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA +IERFW++K+
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKH

AT5G53200.1 Homeodomain-like superfamily protein2.7e-1856.58Show/hide
Query:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHA
        ++ RKQ+K     SE      EV S+EWE I ++EQEEDLI RM+RLVGDRWDLIAGR+PGR   +IER+WI++++
Subjt:  KQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCGAAGCTAAGATAGCAAAACAGCCACGGAAACAGTACAAGAGCAGAACTTCGAAATCGGAAGGTGTTCCCATTTTTTCTGAAGTTATCAGTTTGGAGTGGGA
GGTCATTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGGCTTGTTGGAGACAGGTGGGATTTGATCGCAGGACGAATCCCGGGACGAACTGCAATCG
ACATAGAGAGATTTTGGATATTGAAACATGCTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCGAAGCTAAGATAGCAAAACAGCCACGGAAACAGTACAAGAGCAGAACTTCGAAATCGGAAGGTGTTCCCATTTTTTCTGAAGTTATCAGTTTGGAGTGGGA
GGTCATTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGGCTTGTTGGAGACAGGTGGGATTTGATCGCAGGACGAATCCCGGGACGAACTGCAATCG
ACATAGAGAGATTTTGGATATTGAAACATGCTTCCTGA
Protein sequenceShow/hide protein sequence
METEAKIAKQPRKQYKSRTSKSEGVPIFSEVISLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIDIERFWILKHAS