; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011748 (gene) of Snake gourd v1 genome

Gene IDTan0011748
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:55677724..55678572
RNA-Seq ExpressionTan0011748
SyntenyTan0011748
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21788.1 hypothetical protein TSUD_329120, partial [Trifolium subterraneum]1.2e-2129.31Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCAGSTI
        +EI    +NLFL KF  +RE + + K GPW FD  LL+   I G  + S+L      F++   +LP+ L ++                   + N  G  +
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCAGSTI

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---
        R+++ VD +KPLK G+KL      +E+W    YE+LP++ +  G++GH ++DC++ +++ + +Y         +G WLR S +      V++E   S   
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---

Query:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQ
           F      RG+N  +     A E+N E EQ
Subjt:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQ

MCH80348.1 hypothetical protein [Trifolium medium]3.3e-2125.72Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKGNCAGSTI------------------
        +EI    +NL+L KF  KRE + + + GPW FD  LL+   I G  + S+L   +  F++   +LP+ L ++      G+T+                  
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKGNCAGSTI------------------

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---
        R+++ VD +KPLK GTKL      +E+W    YE+LP++ +  G++GH ++DC++ +++ + +Y         +G WLR S +      V++E   S   
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---

Query:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQVANDELLRTTIKMVGGESTNEMRETETQADEGLKTTINALSENV
           F      +G+N  +     A E++ E EQ    +   +  K+  G  + +  E +T   + ++  +  ++E++
Subjt:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQVANDELLRTTIKMVGGESTNEMRETETQADEGLKTTINALSENV

MCH84359.1 zinc CCHC-type-like protein [Trifolium medium]5.7e-2132.93Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKG------------------NCAGSTI
        V+I    +NLFL KF  K+E +++ K GPW FD  L++   I G  + S+LE     F++   +LP+ L ++A                    N  G  +
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKG------------------NCAGSTI

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY
        R++  +D RKPLK G+KLK     +++W    YE+LP++ +G G++GH +KDC+E +++ +  Y
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY

PNY15174.1 ribonuclease H, partial [Trifolium pratense]4.7e-2332.84Show/hide
Query:  MEERVEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCA
        ++  VEI    +NLFL +F +KR+ E +++ GPW FD  L++ + I G  + S LE   A F+    +LP+ L +DA                   G+  
Subjt:  MEERVEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCA

Query:  GSTIRVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPR
        G  +RVK+ +D RKPLK GT L      + +     YE+LP++ Y  G++GH +KDC+E + N +  Y        PYG WL+ S +      +++EQ  
Subjt:  GSTIRVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPR

Query:  S
        S
Subjt:  S

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.0e-2132.24Show/hide
Query:  NLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPM-----------------VLETDA--KGNCAGSTIRVKIKVD
        N+F  +F+N  +++RI++GGPW+FD  LL+  E  G  + + L+FRY  F+I   NLP+                 V E DA   G C G  IR+++ +D
Subjt:  NLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPM-----------------VLETDA--KGNCAGSTIRVKIKVD

Query:  TRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNV--KGEYPYGEWLR-TSNIQSGPSSVRREQP
           PLK G ++ +G   +     I YE+LP++ Y  GK+GH+V+DC  +   +     + +G W+R  S  +S  +  ++  P
Subjt:  TRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNV--KGEYPYGEWLR-TSNIQSGPSSVRREQP

TrEMBL top hitse value%identityAlignment
A0A2K3PIT6 Ribonuclease H (Fragment)2.3e-2332.84Show/hide
Query:  MEERVEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCA
        ++  VEI    +NLFL +F +KR+ E +++ GPW FD  L++ + I G  + S LE   A F+    +LP+ L +DA                   G+  
Subjt:  MEERVEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCA

Query:  GSTIRVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPR
        G  +RVK+ +D RKPLK GT L      + +     YE+LP++ Y  G++GH +KDC+E + N +  Y        PYG WL+ S +      +++EQ  
Subjt:  GSTIRVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPR

Query:  S
        S
Subjt:  S

A0A2Z6LV25 Uncharacterized protein (Fragment)5.6e-2229.31Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCAGSTI
        +EI    +NLFL KF  +RE + + K GPW FD  LL+   I G  + S+L      F++   +LP+ L ++                   + N  G  +
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDA------------------KGNCAGSTI

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---
        R+++ VD +KPLK G+KL      +E+W    YE+LP++ +  G++GH ++DC++ +++ + +Y         +G WLR S +      V++E   S   
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---

Query:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQ
           F      RG+N  +     A E+N E EQ
Subjt:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQ

A0A392M033 CCHC-type domain-containing protein (Fragment)1.6e-2125.72Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKGNCAGSTI------------------
        +EI    +NL+L KF  KRE + + + GPW FD  LL+   I G  + S+L   +  F++   +LP+ L ++      G+T+                  
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKGNCAGSTI------------------

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---
        R+++ VD +KPLK GTKL      +E+W    YE+LP++ +  G++GH ++DC++ +++ + +Y         +G WLR S +      V++E   S   
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY--------PYGEWLRTSNIQSGPSSVRREQPRS---

Query:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQVANDELLRTTIKMVGGESTNEMRETETQADEGLKTTINALSENV
           F      +G+N  +     A E++ E EQ    +   +  K+  G  + +  E +T   + ++  +  ++E++
Subjt:  ---FNVRGRGRGKNQKSSDWKQAPELNNEAEQVANDELLRTTIKMVGGESTNEMRETETQADEGLKTTINALSENV

A0A392MB81 Zinc CCHC-type-like protein (Fragment)2.8e-2132.93Show/hide
Query:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKG------------------NCAGSTI
        V+I    +NLFL KF  K+E +++ K GPW FD  L++   I G  + S+LE     F++   +LP+ L ++A                    N  G  +
Subjt:  VEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKG------------------NCAGSTI

Query:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY
        R++  +D RKPLK G+KLK     +++W    YE+LP++ +G G++GH +KDC+E +++ +  Y
Subjt:  RVKIKVDTRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEY

A0A5C7H9Y2 CCHC-type domain-containing protein9.5e-2232.24Show/hide
Query:  NLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPM-----------------VLETDA--KGNCAGSTIRVKIKVD
        N+F  +F+N  +++RI++GGPW+FD  LL+  E  G  + + L+FRY  F+I   NLP+                 V E DA   G C G  IR+++ +D
Subjt:  NLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPM-----------------VLETDA--KGNCAGSTIRVKIKVD

Query:  TRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNV--KGEYPYGEWLR-TSNIQSGPSSVRREQP
           PLK G ++ +G   +     I YE+LP++ Y  GK+GH+V+DC  +   +     + +G W+R  S  +S  +  ++  P
Subjt:  TRKPLKGGTKLKVGSMVEEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNV--KGEYPYGEWLR-TSNIQSGPSSVRREQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAGGGTAGAGATAGATAGTAGCGAAAGAAATCTGTTTCTTTGCAAGTTTAAAAACAAAAGGGAGAAGGAACGAATAATGAAGGGAGGGCCATGGATCTTCGA
TTGGGCCCTTCTACTCTTTGAAGAAATAAAGGGGAGAAGTCGAACATCTCAACTCGAGTTCAGGTACGCATATTTTTTTATACATTTTATAAATTTACCTATGGTTTTAG
AGACAGATGCAAAAGGGAATTGCGCAGGCAGCACAATAAGAGTTAAAATCAAAGTTGATACGAGGAAACCGCTCAAAGGAGGAACAAAGTTAAAAGTGGGATCAATGGTC
GAAGAAGTCTGGACCTCAATATCCTACGAGAAGTTGCCAGACTACTATTATGGACGTGGGAAACTTGGTCATATTGTCAAAGACTGTGATGAGCATGATAACAATGTGAA
AGGGGAATATCCTTATGGAGAATGGCTTCGGACCAGCAACATCCAGAGTGGGCCAAGTAGTGTTAGAAGAGAACAACCACGAAGCTTCAATGTAAGGGGAAGAGGCAGAG
GAAAAAACCAAAAAAGTTCGGATTGGAAGCAAGCACCAGAGCTGAACAACGAAGCTGAACAAGTTGCAAACGACGAGCTTTTAAGAACCACAATCAAAATGGTTGGAGGA
GAGTCGACTAACGAAATGAGGGAAACAGAAACACAAGCCGATGAAGGGTTGAAGACGACAATTAATGCTTTGTCAGAAAATGTCACACCCCCTCCCGAACTACCTGCTAA
CTTAGCCCGAAAAGTGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAGGGTAGAGATAGATAGTAGCGAAAGAAATCTGTTTCTTTGCAAGTTTAAAAACAAAAGGGAGAAGGAACGAATAATGAAGGGAGGGCCATGGATCTTCGA
TTGGGCCCTTCTACTCTTTGAAGAAATAAAGGGGAGAAGTCGAACATCTCAACTCGAGTTCAGGTACGCATATTTTTTTATACATTTTATAAATTTACCTATGGTTTTAG
AGACAGATGCAAAAGGGAATTGCGCAGGCAGCACAATAAGAGTTAAAATCAAAGTTGATACGAGGAAACCGCTCAAAGGAGGAACAAAGTTAAAAGTGGGATCAATGGTC
GAAGAAGTCTGGACCTCAATATCCTACGAGAAGTTGCCAGACTACTATTATGGACGTGGGAAACTTGGTCATATTGTCAAAGACTGTGATGAGCATGATAACAATGTGAA
AGGGGAATATCCTTATGGAGAATGGCTTCGGACCAGCAACATCCAGAGTGGGCCAAGTAGTGTTAGAAGAGAACAACCACGAAGCTTCAATGTAAGGGGAAGAGGCAGAG
GAAAAAACCAAAAAAGTTCGGATTGGAAGCAAGCACCAGAGCTGAACAACGAAGCTGAACAAGTTGCAAACGACGAGCTTTTAAGAACCACAATCAAAATGGTTGGAGGA
GAGTCGACTAACGAAATGAGGGAAACAGAAACACAAGCCGATGAAGGGTTGAAGACGACAATTAATGCTTTGTCAGAAAATGTCACACCCCCTCCCGAACTACCTGCTAA
CTTAGCCCGAAAAGTGGCGTGA
Protein sequenceShow/hide protein sequence
MEERVEIDSSERNLFLCKFKNKREKERIMKGGPWIFDWALLLFEEIKGRSRTSQLEFRYAYFFIHFINLPMVLETDAKGNCAGSTIRVKIKVDTRKPLKGGTKLKVGSMV
EEVWTSISYEKLPDYYYGRGKLGHIVKDCDEHDNNVKGEYPYGEWLRTSNIQSGPSSVRREQPRSFNVRGRGRGKNQKSSDWKQAPELNNEAEQVANDELLRTTIKMVGG
ESTNEMRETETQADEGLKTTINALSENVTPPPELPANLARKVA