CuGenDBv2

Gene ID	Tan0011758
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Extensin-like protein
Genome location	LG01:105470313..105470992
RNA-Seq Expression	Tan0011758
Synteny	Tan0011758
Gene Ontology terms	NA
InterPro domains	IPR007789 - Protein of unknown function DUF688

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142634.1 uncharacterized protein LOC101220757 [Cucumis sativus]

5.5e-38

66.92

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRLR  P++S    PPQ  + KLKPPPAV+HF  P NSLHSS RT+S+RWRF RS  V     S+GCFPSPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK
         RK  K      PEPDY+S+L+TLSRWS  +RK
Subjt:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK

XP_008444194.1 PREDICTED: uncharacterized protein LOC103487607 [Cucumis melo]

2.5e-38

67.67

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MD DEFYR+PAAVPFKWEIKPGVPRNHHR RQ P++S    PPQ  + KLKPPPAV+HF  P+NSLHSS RTRSDRWRF RS  V     S+GCFPSPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK
         RK  K      PEPDY+S+L+TLSRWS  +RK
Subjt:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK

XP_022131529.1 uncharacterized protein DKFZp434B061-like [Momordica charantia]

8.5e-39

69.12

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTN----SLHSSSRTRSDRWRFSRSNLVEPEQVS--AGCFP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL   PS     PPPQ  KLKPPP V+HF RP+     SLHSSSRTRSDRWRF+RS+L EP QVS   GCFP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTN----SLHSSSRTRSDRWRFSRSNLVEPEQVS--AGCFP

Query:  SPLPTRKPSK----KPEPDYTSELETLSRWSNRNRK
        SP P RK  K    KPEP+YT+ELETLSRWS  +RK
Subjt:  SPLPTRKPSK----KPEPDYTSELETLSRWSNRNRK

XP_022940016.1 uncharacterized protein LOC111445775 [Cucurbita moschata]

2.2e-39

70.45

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRL QFP++S    P Q  KLKPPPAV  T FHR +NSL    RTRSDRW  ++S L EPEQVS GCF SPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSK----KPEPDYTSELETLSRWSNRNRK
         RK SK    KPEPDY SELETL RWS  ++K
Subjt:  TRKPSK----KPEPDYTSELETLSRWSNRNRK

XP_038899347.1 uncharacterized protein LOC120086669 [Benincasa hispida]

1.2e-40

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLPTR
        MDVDEFYRQPAAVPFKWEIKPGVP+NHHRLR  P++S   PP    KLKPPP+V++F  P+NSLHSSSRTRSDRWRFS     +PEQVS+GCFPSPLP R
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLPTR

Query:  KP----SKKPEPDYTSELETLSRWSNRNRK
        K     S+ PEPDY+S LE+LSRWS  +RK
Subjt:  KP----SKKPEPDYTSELETLSRWSNRNRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY52 Uncharacterized protein

5.6e-36

67.46

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MD DEFYRQPAAVPFKWEIKPGVPRNHHRLR  P++S    PPQ  + KLKPPPAV+HF  P NSLHSS RT+S+RWRF RS  V     S+GCFPSPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSKK-----PEPDYTSELETLSR
         RK  K      PEPDY+S+L+TLSR
Subjt:  TRKPSKK-----PEPDYTSELETLSR

A0A1S3BAM4 uncharacterized protein LOC103487607

1.2e-38

67.67

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MD DEFYR+PAAVPFKWEIKPGVPRNHHR RQ P++S    PPQ  + KLKPPPAV+HF  P+NSLHSS RTRSDRWRF RS  V     S+GCFPSPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQ--KLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK
         RK  K      PEPDY+S+L+TLSRWS  +RK
Subjt:  TRKPSKK-----PEPDYTSELETLSRWSNRNRK

A0A6J1BQH3 uncharacterized protein DKFZp434B061-like

4.1e-39

69.12

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTN----SLHSSSRTRSDRWRFSRSNLVEPEQVS--AGCFP
        MD DEFYR+PAAVPFKWEIKPGVPR HHRL   PS     PPPQ  KLKPPP V+HF RP+     SLHSSSRTRSDRWRF+RS+L EP QVS   GCFP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTN----SLHSSSRTRSDRWRFSRSNLVEPEQVS--AGCFP

Query:  SPLPTRKPSK----KPEPDYTSELETLSRWSNRNRK
        SP P RK  K    KPEP+YT+ELETLSRWS  +RK
Subjt:  SPLPTRKPSK----KPEPDYTSELETLSRWSNRNRK

A0A6J1FHC7 uncharacterized protein LOC111445775

1.1e-39

70.45

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MDVDEFYRQPAAVPFKWEIKPGVPRNHHRL QFP++S    P Q  KLKPPPAV  T FHR +NSL    RTRSDRW  ++S L EPEQVS GCF SPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSK----KPEPDYTSELETLSRWSNRNRK
         RK SK    KPEPDY SELETL RWS  ++K
Subjt:  TRKPSK----KPEPDYTSELETLSRWSNRNRK

A0A6J1ISY3 uncharacterized protein LOC111480325

5.0e-37

68.18

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP
        MDVDEFYRQPAAVPFKWEIKPGVPRNHH L  FP++S    P Q  KLKPPPAV  T FHR +NSL    RTRSDRW  S+S L EPEQVS GCF SPLP
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAV--THFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLP

Query:  TRKPSK----KPEPDYTSELETLSRWSNRNRK
         RK +K    KPEPD  SELETL RWS  ++K
Subjt:  TRKPSK----KPEPDYTSELETLSRWSNRNRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21695.1 hydroxyproline-rich glycoprotein family protein

2.7e-06

37.5

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQK---LKLK-PPPAVTHFHRPTNSLHSSSRTR--SDRWRFSRSNLVEPEQVSAGCFP
        +D D+ +++P AVPFKWEI+PGVP+   R         Q PPP K   LKLK  PP+ +     ++S  S SR+R  S         L  P    + C  
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQK---LKLK-PPPAVTHFHRPTNSLHSSSRTR--SDRWRFSRSNLVEPEQVSAGCFP

Query:  SPLP
        SP P
Subjt:  SPLP

AT1G77400.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789)

1.4e-10

27.78

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Query:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKL------------------------------------------------KLKP--
        +DVD+ +++P  +PF WEI+PGVP+   R+ Q P  ++   PP+KL                                                KLKP  
Subjt:  MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKL------------------------------------------------KLKP--

Query:  -PPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQ----------VSAGCFPSPL----------PTRKPSKKPEPD-YTSELETLSRWSNRNRK
         P +++ F+ P  S  SS R  S+RW+  R N + PE              GCFPSP             RK   + E D Y S++ET+S W+  +R+
Subjt:  -PPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQ----------VSAGCFPSPL----------PTRKPSKKPEPD-YTSELETLSRWSNRNRK

Sequences

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CDS sequence

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ATGGACGTCGATGAATTTTACAGGCAACCGGCTGCCGTTCCTTTCAAATGGGAGATCAAACCCGGCGTCCCCAGGAATCACCACCGGCTCCGCCAGTTTCCCAGTTACTC
CTCTCAACAACCGCCGCCGCAGAAGCTGAAGCTGAAGCCTCCTCCTGCTGTAACTCACTTCCACCGTCCTACCAACTCCCTCCACTCCTCCTCGCGAACCCGGTCCGACC
GGTGGCGATTCTCCCGGTCCAACCTCGTCGAACCCGAGCAGGTCTCGGCCGGTTGCTTCCCCTCGCCTTTGCCGACTCGGAAACCGAGCAAGAAGCCCGAACCGGATTAC
ACCTCTGAATTGGAGACTCTGTCGCGGTGGTCGAATAGAAATAGAAAGCTATGA

mRNA sequence

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Protein sequence

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MDVDEFYRQPAAVPFKWEIKPGVPRNHHRLRQFPSYSSQQPPPQKLKLKPPPAVTHFHRPTNSLHSSSRTRSDRWRFSRSNLVEPEQVSAGCFPSPLPTRKPSKKPEPDY
TSELETLSRWSNRNRKL

Tan0011758 (gene) of Snake gourd v1 genome